RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 PTPN5P54829 565 aa11.54□□□□□ -0.56
EPHA4-213ENST00000495693 SLF2Q8IX21 1173 aa11.54□□□□□ -0.56
EPHA4-213ENST00000495693 KNSTRNQ9Y448 316 aa11.54□□□□□ -0.56
EPHA4-213ENST00000495693 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
EPHA4-213ENST00000495693 ARHGEF40Q8TER5 1519 aa11.54□□□□□ -0.56
EPHA4-213ENST00000495693 LRPPRCP42704 1394 aaKnown RBP11.54□□□□□ -0.56
EPHA4-213ENST00000495693 YEATS2Q9ULM3 1422 aa11.53□□□□□ -0.56
EPHA4-213ENST00000495693 SLC4A3P48751 1232 aa11.53□□□□□ -0.56
EPHA4-213ENST00000495693 C14orf93Q9H972 538 aaKnown RBP11.53□□□□□ -0.56
EPHA4-213ENST00000495693 HPS5Q9UPZ3 1129 aa11.53□□□□□ -0.56
EPHA4-213ENST00000495693 NEXMIFQ5QGS0 1516 aa11.52□□□□□ -0.57
EPHA4-213ENST00000495693 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.57
EPHA4-213ENST00000495693 PER1O15534 1290 aaPredicted RBP11.52□□□□□ -0.57
EPHA4-213ENST00000495693 CENPJQ9HC77 1338 aaPredicted RBP11.52□□□□□ -0.57
EPHA4-213ENST00000495693 NINLQ9Y2I6 1382 aa11.52□□□□□ -0.57
EPHA4-213ENST00000495693 PDE3BQ13370 1112 aa11.51□□□□□ -0.57
EPHA4-213ENST00000495693 PNISRQ8TF01 805 aaKnown RBP11.51□□□□□ -0.57
EPHA4-213ENST00000495693 CCDC102AQ96A19 550 aa11.51□□□□□ -0.57
EPHA4-213ENST00000495693 PHOX2BQ99453 314 aa11.51□□□□□ -0.57
EPHA4-213ENST00000495693 PANK3Q9H999 370 aa11.51□□□□□ -0.57
EPHA4-213ENST00000495693 WBP1LQ9NX94 342 aa11.51□□□□□ -0.57
EPHA4-213ENST00000495693 ADGRF5Q8IZF2 1346 aa11.51□□□□□ -0.57
EPHA4-213ENST00000495693 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
EPHA4-213ENST00000495693 PPP4CP60510 307 aa11.5□□□□□ -0.57
EPHA4-213ENST00000495693 ERVK-7P63135 1459 aa11.5□□□□□ -0.57
EPHA4-213ENST00000495693 ADGRB1O14514 1584 aa11.5□□□□□ -0.57
EPHA4-213ENST00000495693 SIGLEC1Q9BZZ2 1709 aa11.49□□□□□ -0.57
EPHA4-213ENST00000495693 CFAP70Q5T0N1 1121 aa11.49□□□□□ -0.57
EPHA4-213ENST00000495693 SPATA31D1Q6ZQQ2 1576 aa11.49□□□□□ -0.57
EPHA4-213ENST00000495693 ESF1Q9H501 851 aaKnown RBP11.48□□□□□ -0.57
EPHA4-213ENST00000495693 DAXXQ9UER7 740 aaPredicted RBP11.48□□□□□ -0.57
EPHA4-213ENST00000495693 TMEM131LA2VDJ0 1609 aa11.48□□□□□ -0.57
EPHA4-213ENST00000495693 TSPOAP1O95153 1857 aa11.48□□□□□ -0.57
EPHA4-213ENST00000495693 KIF13AQ9H1H9 1805 aa11.47□□□□□ -0.57
EPHA4-213ENST00000495693 MYOM1P52179 1685 aa11.47□□□□□ -0.57
EPHA4-213ENST00000495693 QRICH2Q9H0J4 1663 aa11.47□□□□□ -0.57
EPHA4-213ENST00000495693 CCDC184Q52MB2 194 aa11.47□□□□□ -0.57
EPHA4-213ENST00000495693 NGEFQ8N5V2 710 aa11.47□□□□□ -0.57
EPHA4-213ENST00000495693 EVC2Q86UK5 1308 aa11.46□□□□□ -0.57
EPHA4-213ENST00000495693 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
EPHA4-213ENST00000495693 NUDCQ9Y266 331 aa11.46□□□□□ -0.57
EPHA4-213ENST00000495693 USP32Q8NFA0 1604 aa11.46□□□□□ -0.58
EPHA4-213ENST00000495693 NSD2O96028 1365 aa11.45□□□□□ -0.58
EPHA4-213ENST00000495693 IDI1Q13907 227 aa11.45□□□□□ -0.58
EPHA4-213ENST00000495693 BLMP54132 1417 aaPredicted RBP11.44□□□□□ -0.58
EPHA4-213ENST00000495693 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
EPHA4-213ENST00000495693 PRR14Q9BWN1 585 aa11.44□□□□□ -0.58
EPHA4-213ENST00000495693 ARHGEF28Q8N1W1 1705 aaKnown RBP11.43□□□□□ -0.58
EPHA4-213ENST00000495693 CLTCQ00610 1675 aaKnown RBP11.43□□□□□ -0.58
EPHA4-213ENST00000495693 RNF40O75150 1001 aa11.43□□□□□ -0.58
EPHA4-213ENST00000495693 WDR43Q15061 677 aaKnown RBP eCLIP11.43□□□□□ -0.58
EPHA4-213ENST00000495693 CC2D1BQ5T0F9 858 aaKnown RBP11.43□□□□□ -0.58
EPHA4-213ENST00000495693 ATAD2Q6PL18 1390 aa11.42□□□□□ -0.58
EPHA4-213ENST00000495693 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
EPHA4-213ENST00000495693 SULF1Q8IWU6 871 aa11.42□□□□□ -0.58
EPHA4-213ENST00000495693 DLC1Q96QB1 1528 aa11.41□□□□□ -0.58
EPHA4-213ENST00000495693 ITGBL1O95965 494 aaPredicted RBP11.41□□□□□ -0.58
EPHA4-213ENST00000495693 AMHR2Q16671 573 aa11.41□□□□□ -0.58
EPHA4-213ENST00000495693 TMUB1Q9BVT8 246 aa11.41□□□□□ -0.58
EPHA4-213ENST00000495693 CFAP65Q6ZU64 1925 aaKnown RBP11.41□□□□□ -0.58
EPHA4-213ENST00000495693 SLC10A3P09131 477 aa11.4□□□□□ -0.58
EPHA4-213ENST00000495693 APLP1P51693 650 aa11.4□□□□□ -0.58
EPHA4-213ENST00000495693 AK7Q96M32 723 aa11.4□□□□□ -0.58
EPHA4-213ENST00000495693 TRAK1Q9UPV9 953 aa11.4□□□□□ -0.58
EPHA4-213ENST00000495693 CGNL1Q0VF96 1302 aa11.39□□□□□ -0.59
EPHA4-213ENST00000495693 PPP2R1AP30153 589 aa11.39□□□□□ -0.59
EPHA4-213ENST00000495693 CLCN1P35523 988 aa11.39□□□□□ -0.59
EPHA4-213ENST00000495693 NLRP7Q8WX94 980 aa11.39□□□□□ -0.59
EPHA4-213ENST00000495693 PPP4R2Q9NY27 417 aa11.39□□□□□ -0.59
EPHA4-213ENST00000495693 ANKRD36BQ8N2N9 1353 aa11.39□□□□□ -0.59
EPHA4-213ENST00000495693 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
EPHA4-213ENST00000495693 GPCPD1Q9NPB8 672 aa11.38□□□□□ -0.59
EPHA4-213ENST00000495693 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
EPHA4-213ENST00000495693 YTHDC2Q9H6S0 1430 aaKnown RBP11.37□□□□□ -0.59
EPHA4-213ENST00000495693 MDM2Q00987 491 aaPredicted RBP11.37□□□□□ -0.59
EPHA4-213ENST00000495693 KMT5BQ4FZB7 885 aa11.37□□□□□ -0.59
EPHA4-213ENST00000495693 PLA2G2EQ9NZK7 142 aa11.37□□□□□ -0.59
EPHA4-213ENST00000495693 ALKQ9UM73 1620 aa11.37□□□□□ -0.59
EPHA4-213ENST00000495693 POLR3AO14802 1390 aaPredicted RBP11.37□□□□□ -0.59
EPHA4-213ENST00000495693 NLRP1Q9C000 1473 aa11.37□□□□□ -0.59
EPHA4-213ENST00000495693 RIMS2Q9UQ26 1411 aa11.36□□□□□ -0.59
EPHA4-213ENST00000495693 ACTN4O43707 911 aaKnown RBP11.36□□□□□ -0.59
EPHA4-213ENST00000495693 CFAP53Q96M91 514 aa11.36□□□□□ -0.59
EPHA4-213ENST00000495693 ZMYM3Q14202 1370 aa11.36□□□□□ -0.59
EPHA4-213ENST00000495693 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
EPHA4-213ENST00000495693 NSD3Q9BZ95 1437 aa11.35□□□□□ -0.59
EPHA4-213ENST00000495693 MYO5BQ9ULV0 1848 aa11.35□□□□□ -0.59
EPHA4-213ENST00000495693 TRIM66O15016 1216 aa11.35□□□□□ -0.59
EPHA4-213ENST00000495693 CFHP08603 1231 aa11.35□□□□□ -0.59
EPHA4-213ENST00000495693 TERF2IPQ9NYB0 399 aa11.35□□□□□ -0.59
EPHA4-213ENST00000495693 TNRQ92752 1358 aa11.35□□□□□ -0.59
EPHA4-213ENST00000495693 MED14O60244 1454 aa11.34□□□□□ -0.59
EPHA4-213ENST00000495693 PTPRMP28827 1452 aa11.34□□□□□ -0.59
EPHA4-213ENST00000495693 DDX11L8A8MPP1 907 aa11.34□□□□□ -0.59
EPHA4-213ENST00000495693 SIRT1Q96EB6 747 aa11.34□□□□□ -0.59
EPHA4-213ENST00000495693 POGKQ9P215 609 aa11.34□□□□□ -0.59
EPHA4-213ENST00000495693 TULP4Q9NRJ4 1543 aa11.34□□□□□ -0.59
EPHA4-213ENST00000495693 ABCC11Q96J66 1382 aa11.33□□□□□ -0.6
EPHA4-213ENST00000495693 KNDC1Q76NI1 1749 aa11.33□□□□□ -0.6
EPHA4-213ENST00000495693 CD46P15529 392 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms