RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 TRAK2O60296 914 aa10.85□□□□□ -0.67
NCKAP1-208ENST00000495619 SKIP12755 728 aa10.85□□□□□ -0.67
NCKAP1-208ENST00000495619 CALR3Q96L12 384 aaKnown RBP10.85□□□□□ -0.67
NCKAP1-208ENST00000495619 GLMNQ92990 594 aa10.84□□□□□ -0.67
NCKAP1-208ENST00000495619 ZNF395Q9H8N7 513 aaPredicted RBP10.84□□□□□ -0.67
NCKAP1-208ENST00000495619 POLMQ9NP87 494 aaPredicted RBP10.84□□□□□ -0.67
NCKAP1-208ENST00000495619 CHIC2Q9UKJ5 165 aa10.84□□□□□ -0.67
NCKAP1-208ENST00000495619 TTLL8A6PVC2 850 aa10.83□□□□□ -0.68
NCKAP1-208ENST00000495619 SNRPBP14678 240 aaKnown RBP10.83□□□□□ -0.68
NCKAP1-208ENST00000495619 EML3Q32P44 896 aa10.83□□□□□ -0.68
NCKAP1-208ENST00000495619 NLRP3Q96P20 1036 aa10.83□□□□□ -0.68
NCKAP1-208ENST00000495619 CDCA7Q9BWT1 371 aaPredicted RBP10.83□□□□□ -0.68
NCKAP1-208ENST00000495619 GNRH1P01148 92 aa10.82□□□□□ -0.68
NCKAP1-208ENST00000495619 SCTRP47872 440 aa10.82□□□□□ -0.68
NCKAP1-208ENST00000495619 ESCO1Q5FWF5 840 aa10.81□□□□□ -0.68
NCKAP1-208ENST00000495619 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
NCKAP1-208ENST00000495619 SOS2Q07890 1332 aaPredicted RBP10.81□□□□□ -0.68
NCKAP1-208ENST00000495619 MEN1O00255 615 aa10.8□□□□□ -0.68
NCKAP1-208ENST00000495619 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.8□□□□□ -0.68
NCKAP1-208ENST00000495619 TSGA10IPQ3SY00 556 aa10.8□□□□□ -0.68
NCKAP1-208ENST00000495619 INSM2Q96T92 566 aaPredicted RBP10.8□□□□□ -0.68
NCKAP1-208ENST00000495619 NOD1Q9Y239 953 aa10.8□□□□□ -0.68
NCKAP1-208ENST00000495619 PIK3CDO00329 1044 aa10.79□□□□□ -0.68
NCKAP1-208ENST00000495619 C14orf37Q86TY3 774 aa10.79□□□□□ -0.68
NCKAP1-208ENST00000495619 ZNF777Q9ULD5 760 aaPredicted RBP10.79□□□□□ -0.68
NCKAP1-208ENST00000495619 A0A1W2PRU2 124 aa10.78□□□□□ -0.68
NCKAP1-208ENST00000495619 ADAMTS19Q8TE59 1207 aa10.78□□□□□ -0.68
NCKAP1-208ENST00000495619 USP17L5A8MUK1 530 aa10.77□□□□□ -0.69
NCKAP1-208ENST00000495619 ATP9BO43861 1147 aa10.77□□□□□ -0.69
NCKAP1-208ENST00000495619 GTF2E1P29083 439 aaPredicted RBP10.77□□□□□ -0.69
NCKAP1-208ENST00000495619 GPC1P35052 558 aa10.77□□□□□ -0.69
NCKAP1-208ENST00000495619 CLN3Q13286 438 aa10.77□□□□□ -0.69
NCKAP1-208ENST00000495619 TRIM50Q86XT4 487 aa10.77□□□□□ -0.69
NCKAP1-208ENST00000495619 ARHGEF10LQ9HCE6 1279 aa10.77□□□□□ -0.69
NCKAP1-208ENST00000495619 FIGNL2A6NMB9 653 aa10.76□□□□□ -0.69
NCKAP1-208ENST00000495619 CTSOP43234 321 aaPredicted RBP10.76□□□□□ -0.69
NCKAP1-208ENST00000495619 KDF1Q8NAX2 398 aaPredicted RBP10.76□□□□□ -0.69
NCKAP1-208ENST00000495619 RNF144AP50876 292 aaPredicted RBP10.75□□□□□ -0.69
NCKAP1-208ENST00000495619 NCOA4Q13772 614 aa10.75□□□□□ -0.69
NCKAP1-208ENST00000495619 SLC27A3Q5K4L6 730 aa10.75□□□□□ -0.69
NCKAP1-208ENST00000495619 PLEKHM2Q8IWE5 1019 aa10.75□□□□□ -0.69
NCKAP1-208ENST00000495619 ATP1A2P50993 1020 aa10.74□□□□□ -0.69
NCKAP1-208ENST00000495619 TBC1D9Q6ZT07 1266 aa10.74□□□□□ -0.69
NCKAP1-208ENST00000495619 LYSMD3Q7Z3D4 306 aa10.74□□□□□ -0.69
NCKAP1-208ENST00000495619 DNMT3LQ9UJW3 386 aa10.74□□□□□ -0.69
NCKAP1-208ENST00000495619 USP17L3A6NCW0 530 aa10.73□□□□□ -0.69
NCKAP1-208ENST00000495619 USP17L4A6NCW7 530 aa10.73□□□□□ -0.69
NCKAP1-208ENST00000495619 PSME1Q06323 249 aa10.73□□□□□ -0.69
NCKAP1-208ENST00000495619 USP17L2Q6R6M4 530 aa10.73□□□□□ -0.69
NCKAP1-208ENST00000495619 USP17L1Q7RTZ2 530 aa10.73□□□□□ -0.69
NCKAP1-208ENST00000495619 RNF217Q8TC41 542 aa10.73□□□□□ -0.69
NCKAP1-208ENST00000495619 SLC16A10Q8TF71 515 aa10.73□□□□□ -0.69
NCKAP1-208ENST00000495619 CNKSR1Q969H4 720 aa10.73□□□□□ -0.69
NCKAP1-208ENST00000495619 ESYT1Q9BSJ8 1104 aa10.73□□□□□ -0.69
NCKAP1-208ENST00000495619 SOBPA7XYQ1 873 aa10.72□□□□□ -0.69
NCKAP1-208ENST00000495619 NPAS3Q8IXF0 933 aa10.72□□□□□ -0.69
NCKAP1-208ENST00000495619 DEPDC4Q8N2C3 294 aa10.72□□□□□ -0.69
NCKAP1-208ENST00000495619 UCN2Q96RP3 112 aa10.72□□□□□ -0.69
NCKAP1-208ENST00000495619 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
NCKAP1-208ENST00000495619 NXF1Q9UBU9 619 aaKnown RBP10.72□□□□□ -0.69
NCKAP1-208ENST00000495619 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
NCKAP1-208ENST00000495619 GTF2IP78347 998 aa10.71□□□□□ -0.69
NCKAP1-208ENST00000495619 ZNF775Q96BV0 537 aaPredicted RBP10.71□□□□□ -0.69
NCKAP1-208ENST00000495619 PPP1R12CQ9BZL4 782 aa10.71□□□□□ -0.69
NCKAP1-208ENST00000495619 RAB6BQ9NRW1 208 aa10.71□□□□□ -0.69
NCKAP1-208ENST00000495619 PALM3A6NDB9 673 aaPredicted RBP10.7□□□□□ -0.7
NCKAP1-208ENST00000495619 XAGE2Q96GT9 111 aa10.7□□□□□ -0.7
NCKAP1-208ENST00000495619 TERTO14746 1132 aaKnown RBP10.69□□□□□ -0.7
NCKAP1-208ENST00000495619 FOXD4L5Q5VV16 416 aaPredicted RBP10.69□□□□□ -0.7
NCKAP1-208ENST00000495619 PRICKLE2Q7Z3G6 844 aa10.69□□□□□ -0.7
NCKAP1-208ENST00000495619 BACH1O14867 736 aa10.68□□□□□ -0.7
NCKAP1-208ENST00000495619 GDF10P55107 478 aa10.68□□□□□ -0.7
NCKAP1-208ENST00000495619 CENPCQ03188 943 aa10.68□□□□□ -0.7
NCKAP1-208ENST00000495619 ZSCAN10Q96SZ4 725 aaPredicted RBP10.68□□□□□ -0.7
NCKAP1-208ENST00000495619 MKRN1Q9UHC7 482 aaKnown RBP10.68□□□□□ -0.7
NCKAP1-208ENST00000495619 MAFBQ9Y5Q3 323 aaPredicted RBP10.68□□□□□ -0.7
NCKAP1-208ENST00000495619 IL2RAP01589 272 aa10.67□□□□□ -0.7
NCKAP1-208ENST00000495619 INHAP05111 366 aa10.67□□□□□ -0.7
NCKAP1-208ENST00000495619 GNASQ5JWF2 1037 aa10.67□□□□□ -0.7
NCKAP1-208ENST00000495619 TMEM214Q6NUQ4 689 aaKnown RBP10.67□□□□□ -0.7
NCKAP1-208ENST00000495619 ETNK1Q9HBU6 452 aa10.67□□□□□ -0.7
NCKAP1-208ENST00000495619 PCDHGA11Q9Y5H2 935 aa10.67□□□□□ -0.7
NCKAP1-208ENST00000495619 WASLO00401 505 aaPredicted RBP10.66□□□□□ -0.7
NCKAP1-208ENST00000495619 LMOD1P29536 600 aaPredicted RBP10.66□□□□□ -0.7
NCKAP1-208ENST00000495619 PTSQ03393 145 aa10.66□□□□□ -0.7
NCKAP1-208ENST00000495619 CCDC97Q96F63 343 aaPredicted RBP10.66□□□□□ -0.7
NCKAP1-208ENST00000495619 GRIP2Q9C0E4 1043 aa10.66□□□□□ -0.7
NCKAP1-208ENST00000495619 DNAAF2Q9NVR5 837 aaKnown RBP10.66□□□□□ -0.7
NCKAP1-208ENST00000495619 TLR1Q15399 786 aa10.65□□□□□ -0.7
NCKAP1-208ENST00000495619 WDR44Q5JSH3 913 aa10.65□□□□□ -0.7
NCKAP1-208ENST00000495619 LARP1Q6PKG0 1096 aaKnown RBP10.65□□□□□ -0.7
NCKAP1-208ENST00000495619 LARGE2Q8N3Y3 721 aa10.65□□□□□ -0.7
NCKAP1-208ENST00000495619 WFS1O76024 890 aa10.64□□□□□ -0.71
NCKAP1-208ENST00000495619 TAS1R3Q7RTX0 852 aa10.64□□□□□ -0.71
NCKAP1-208ENST00000495619 VRTNQ9H8Y1 702 aa10.64□□□□□ -0.71
NCKAP1-208ENST00000495619 SERPINA10Q9UK55 444 aa10.64□□□□□ -0.71
NCKAP1-208ENST00000495619 SPATA31C2B4DYI2 1134 aa10.63□□□□□ -0.71
NCKAP1-208ENST00000495619 RASA1P20936 1047 aa10.63□□□□□ -0.71
NCKAP1-208ENST00000495619 SCNN1DP51172 638 aa10.63□□□□□ -0.71
NCKAP1-208ENST00000495619 TREML4Q6UXN2 200 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms