RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 RGPD4Q7Z3J3 1758 aa19.46■□□□□ 0.71
PTPRE-211ENST00000495530 ABCC6O95255 1503 aa19.46■□□□□ 0.71
PTPRE-211ENST00000495530 LTN1O94822 1766 aa19.45■□□□□ 0.7
PTPRE-211ENST00000495530 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
PTPRE-211ENST00000495530 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
PTPRE-211ENST00000495530 ADAMTS8Q9UP79 889 aa19.45■□□□□ 0.7
PTPRE-211ENST00000495530 AXIN2Q9Y2T1 843 aa19.45■□□□□ 0.7
PTPRE-211ENST00000495530 COL3A1P02461 1466 aaPredicted RBP19.44■□□□□ 0.7
PTPRE-211ENST00000495530 ANKRD24Q8TF21 1146 aa19.44■□□□□ 0.7
PTPRE-211ENST00000495530 LTV1Q96GA3 475 aaPredicted RBP19.44■□□□□ 0.7
PTPRE-211ENST00000495530 FCHSD2O94868 740 aa19.43■□□□□ 0.7
PTPRE-211ENST00000495530 EVA1CP58658 441 aa19.43■□□□□ 0.7
PTPRE-211ENST00000495530 SPATA31A1Q5TZJ5 1347 aa19.43■□□□□ 0.7
PTPRE-211ENST00000495530 PEAK1Q9H792 1746 aa19.42■□□□□ 0.7
PTPRE-211ENST00000495530 CSB-PGBD3P0DP91 1061 aa19.41■□□□□ 0.7
PTPRE-211ENST00000495530 NEFMP07197 916 aa19.4■□□□□ 0.7
PTPRE-211ENST00000495530 PDE3BQ13370 1112 aa19.4■□□□□ 0.7
PTPRE-211ENST00000495530 EYA1Q99502 592 aa19.4■□□□□ 0.7
PTPRE-211ENST00000495530 ERBB3P21860 1342 aa19.4■□□□□ 0.7
PTPRE-211ENST00000495530 SYT17Q9BSW7 474 aa19.38■□□□□ 0.69
PTPRE-211ENST00000495530 COL18A1P39060 1754 aa19.37■□□□□ 0.69
PTPRE-211ENST00000495530 IGSF1Q8N6C5 1336 aa19.37■□□□□ 0.69
PTPRE-211ENST00000495530 PTGER2P43116 358 aa19.37■□□□□ 0.69
PTPRE-211ENST00000495530 SULT6B1Q6IMI4 303 aa19.37■□□□□ 0.69
PTPRE-211ENST00000495530 NLRP2Q9NX02 1062 aa19.37■□□□□ 0.69
PTPRE-211ENST00000495530 WDR17Q8IZU2 1322 aa19.36■□□□□ 0.69
PTPRE-211ENST00000495530 NBPF6Q5VWK0 638 aa19.36■□□□□ 0.69
PTPRE-211ENST00000495530 TOM1L2Q6ZVM7 507 aa19.36■□□□□ 0.69
PTPRE-211ENST00000495530 RUNDC1Q96C34 613 aa19.36■□□□□ 0.69
PTPRE-211ENST00000495530 NBPF4Q96M43 638 aa19.36■□□□□ 0.69
PTPRE-211ENST00000495530 FHDC1Q9C0D6 1143 aaPredicted RBP19.36■□□□□ 0.69
PTPRE-211ENST00000495530 HMOX1P09601 288 aa19.35■□□□□ 0.69
PTPRE-211ENST00000495530 STRN4Q9NRL3 753 aa19.35■□□□□ 0.69
PTPRE-211ENST00000495530 ZBTB7AO95365 584 aa19.34■□□□□ 0.69
PTPRE-211ENST00000495530 RSPH6AQ9H0K4 717 aa19.34■□□□□ 0.69
PTPRE-211ENST00000495530 SBF2Q86WG5 1849 aa19.34■□□□□ 0.69
PTPRE-211ENST00000495530 MAPK8IP3Q9UPT6 1336 aa19.33■□□□□ 0.69
PTPRE-211ENST00000495530 BARGINQ6ZT62 677 aa19.33■□□□□ 0.68
PTPRE-211ENST00000495530 CARD10Q9BWT7 1032 aa19.33■□□□□ 0.68
PTPRE-211ENST00000495530 COL5A2P05997 1499 aaPredicted RBP19.33■□□□□ 0.68
PTPRE-211ENST00000495530 LMO7Q8WWI1 1683 aa19.33■□□□□ 0.68
PTPRE-211ENST00000495530 PRKAR2BP31323 418 aa19.32■□□□□ 0.68
PTPRE-211ENST00000495530 NGEFQ8N5V2 710 aa19.32■□□□□ 0.68
PTPRE-211ENST00000495530 ANO8Q9HCE9 1232 aaPredicted RBP19.32■□□□□ 0.68
PTPRE-211ENST00000495530 KDRP35968 1356 aa19.32■□□□□ 0.68
PTPRE-211ENST00000495530 PLSCR1O15162 318 aa19.31■□□□□ 0.68
PTPRE-211ENST00000495530 LARP1Q6PKG0 1096 aaKnown RBP19.31■□□□□ 0.68
PTPRE-211ENST00000495530 CCDC146Q8IYE0 955 aa19.31■□□□□ 0.68
PTPRE-211ENST00000495530 PLEKHF1Q96S99 279 aa19.31■□□□□ 0.68
PTPRE-211ENST00000495530 GOLGB1Q14789 3259 aaKnown RBP19.31■□□□□ 0.68
PTPRE-211ENST00000495530 RGPD5Q99666 1765 aa19.31■□□□□ 0.68
PTPRE-211ENST00000495530 AEBP1Q8IUX7 1158 aa19.3■□□□□ 0.68
PTPRE-211ENST00000495530 RAPGEF4Q8WZA2 1011 aa19.3■□□□□ 0.68
PTPRE-211ENST00000495530 PDGFDQ9GZP0 370 aaPredicted RBP19.3■□□□□ 0.68
PTPRE-211ENST00000495530 ATF5Q9Y2D1 282 aaPredicted RBP19.3■□□□□ 0.68
PTPRE-211ENST00000495530 PARP4Q9UKK3 1724 aaKnown RBP19.3■□□□□ 0.68
PTPRE-211ENST00000495530 CRB1P82279 1406 aa19.29■□□□□ 0.68
PTPRE-211ENST00000495530 USHBP1Q8N6Y0 703 aa19.29■□□□□ 0.68
PTPRE-211ENST00000495530 USP35Q9P2H5 1018 aa19.29■□□□□ 0.68
PTPRE-211ENST00000495530 SHANK3Q9BYB0 1731 aa19.28■□□□□ 0.68
PTPRE-211ENST00000495530 FAM208AQ9UK61 1670 aaKnown RBP19.28■□□□□ 0.68
PTPRE-211ENST00000495530 APAF1O14727 1248 aa19.28■□□□□ 0.68
PTPRE-211ENST00000495530 HNRNPUQ00839 825 aaKnown RBP eCLIP19.28■□□□□ 0.68
PTPRE-211ENST00000495530 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
PTPRE-211ENST00000495530 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
PTPRE-211ENST00000495530 AMOTQ4VCS5 1084 aa19.27■□□□□ 0.68
PTPRE-211ENST00000495530 THRAP3Q9Y2W1 955 aaKnown RBP19.27■□□□□ 0.68
PTPRE-211ENST00000495530 NCAPD2Q15021 1401 aa19.26■□□□□ 0.67
PTPRE-211ENST00000495530 TATP17735 454 aaPredicted RBP19.26■□□□□ 0.67
PTPRE-211ENST00000495530 PLEKHO1Q53GL0 409 aaPredicted RBP19.26■□□□□ 0.67
PTPRE-211ENST00000495530 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
PTPRE-211ENST00000495530 BCL11BQ9C0K0 894 aaPredicted RBP19.26■□□□□ 0.67
PTPRE-211ENST00000495530 MAP3K5Q99683 1374 aa19.26■□□□□ 0.67
PTPRE-211ENST00000495530 PLEKHG2Q9H7P9 1386 aa19.26■□□□□ 0.67
PTPRE-211ENST00000495530 PHACTR3Q96KR7 559 aa19.25■□□□□ 0.67
PTPRE-211ENST00000495530 MTFR1LQ9H019 292 aa19.25■□□□□ 0.67
PTPRE-211ENST00000495530 OVOS2A0A0G2JMS6 1433 aa19.25■□□□□ 0.67
PTPRE-211ENST00000495530 GPR162Q16538 588 aa19.24■□□□□ 0.67
PTPRE-211ENST00000495530 GAS2L2Q8NHY3 880 aa19.24■□□□□ 0.67
PTPRE-211ENST00000495530 CDCA7Q9BWT1 371 aaPredicted RBP19.24■□□□□ 0.67
PTPRE-211ENST00000495530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.24■□□□□ 0.67
PTPRE-211ENST00000495530 IL2RBP14784 551 aa19.23■□□□□ 0.67
PTPRE-211ENST00000495530 TMPOP42166 694 aaKnown RBP19.23■□□□□ 0.67
PTPRE-211ENST00000495530 NFE2L2Q16236 605 aa19.23■□□□□ 0.67
PTPRE-211ENST00000495530 SPG7Q9UQ90 795 aa19.23■□□□□ 0.67
PTPRE-211ENST00000495530 RIPK4P57078 832 aa19.22■□□□□ 0.67
PTPRE-211ENST00000495530 SGIP1Q9BQI5 828 aa19.22■□□□□ 0.67
PTPRE-211ENST00000495530 LMOD3Q0VAK6 560 aa19.21■□□□□ 0.67
PTPRE-211ENST00000495530 NEUROD2Q15784 382 aa19.21■□□□□ 0.67
PTPRE-211ENST00000495530 RGPD2P0DJD1 1756 aa19.2■□□□□ 0.66
PTPRE-211ENST00000495530 CCDC27Q2M243 656 aa19.2■□□□□ 0.66
PTPRE-211ENST00000495530 MTHFSDQ2M296 383 aaKnown RBP19.2■□□□□ 0.66
PTPRE-211ENST00000495530 ARXQ96QS3 562 aa19.2■□□□□ 0.66
PTPRE-211ENST00000495530 STK32BQ9NY57 414 aa19.2■□□□□ 0.66
PTPRE-211ENST00000495530 HTATSF1O43719 755 aaKnown RBP19.18■□□□□ 0.66
PTPRE-211ENST00000495530 HSPA6P17066 643 aa19.18■□□□□ 0.66
PTPRE-211ENST00000495530 ZCRB1Q8TBF4 217 aaKnown RBP19.18■□□□□ 0.66
PTPRE-211ENST00000495530 RRP7AQ9Y3A4 280 aaKnown RBP19.18■□□□□ 0.66
PTPRE-211ENST00000495530 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
PTPRE-211ENST00000495530 ZBED9Q6R2W3 1325 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms