RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 CARD10Q9BWT7 1032 aa7.35□□□□□ -1.23
SRPRB-205ENST00000494297 POLKQ9UBT6 870 aa7.35□□□□□ -1.23
SRPRB-205ENST00000494297 CCDC9Q9Y3X0 531 aaKnown RBP7.35□□□□□ -1.23
SRPRB-205ENST00000494297 NRAPQ86VF7 1730 aa7.35□□□□□ -1.23
SRPRB-205ENST00000494297 BLMP54132 1417 aaPredicted RBP7.35□□□□□ -1.23
SRPRB-205ENST00000494297 CRB1P82279 1406 aa7.35□□□□□ -1.23
SRPRB-205ENST00000494297 GLI3P10071 1580 aa7.34□□□□□ -1.23
SRPRB-205ENST00000494297 ERBB3P21860 1342 aa7.34□□□□□ -1.23
SRPRB-205ENST00000494297 TOM1L2Q6ZVM7 507 aa7.34□□□□□ -1.23
SRPRB-205ENST00000494297 MORC1Q86VD1 984 aa7.34□□□□□ -1.23
SRPRB-205ENST00000494297 TCP11L2Q8N4U5 519 aa7.34□□□□□ -1.23
SRPRB-205ENST00000494297 ANKRD24Q8TF21 1146 aa7.34□□□□□ -1.23
SRPRB-205ENST00000494297 RGS12O14924 1447 aa7.34□□□□□ -1.23
SRPRB-205ENST00000494297 RTL1A6NKG5 1358 aa7.33□□□□□ -1.24
SRPRB-205ENST00000494297 SOCS7O14512 581 aa7.33□□□□□ -1.24
SRPRB-205ENST00000494297 CSB-PGBD3P0DP91 1061 aa7.33□□□□□ -1.24
SRPRB-205ENST00000494297 FAM98CQ17RN3 349 aaKnown RBP7.33□□□□□ -1.24
SRPRB-205ENST00000494297 HSP90AB2PQ58FF8 381 aa7.33□□□□□ -1.24
SRPRB-205ENST00000494297 SEPT12Q8IYM1 358 aa7.33□□□□□ -1.24
SRPRB-205ENST00000494297 EMILIN1Q9Y6C2 1016 aa7.33□□□□□ -1.24
SRPRB-205ENST00000494297 INSRP06213 1382 aa7.33□□□□□ -1.24
SRPRB-205ENST00000494297 KIF20BQ96Q89 1820 aa7.32□□□□□ -1.24
SRPRB-205ENST00000494297 CC2D1BQ5T0F9 858 aaKnown RBP7.32□□□□□ -1.24
SRPRB-205ENST00000494297 CDCA7Q9BWT1 371 aaPredicted RBP7.32□□□□□ -1.24
SRPRB-205ENST00000494297 USP35Q9P2H5 1018 aa7.32□□□□□ -1.24
SRPRB-205ENST00000494297 FLT4P35916 1363 aa7.32□□□□□ -1.24
SRPRB-205ENST00000494297 ZNF316A6NFI3 1004 aaPredicted RBP7.31□□□□□ -1.24
SRPRB-205ENST00000494297 TNNT2P45379 298 aaPredicted RBP7.31□□□□□ -1.24
SRPRB-205ENST00000494297 DDX10Q13206 875 aaKnown RBP7.31□□□□□ -1.24
SRPRB-205ENST00000494297 KRT27Q7Z3Y8 459 aa7.31□□□□□ -1.24
SRPRB-205ENST00000494297 NLRP2Q9NX02 1062 aa7.31□□□□□ -1.24
SRPRB-205ENST00000494297 SMG6Q86US8 1419 aaKnown RBP7.3□□□□□ -1.24
SRPRB-205ENST00000494297 PPM1GO15355 546 aaPredicted RBP7.3□□□□□ -1.24
SRPRB-205ENST00000494297 MTHFSP49914 203 aa7.3□□□□□ -1.24
SRPRB-205ENST00000494297 NBPF6Q5VWK0 638 aa7.3□□□□□ -1.24
SRPRB-205ENST00000494297 MAMSTRQ6ZN01 415 aa7.3□□□□□ -1.24
SRPRB-205ENST00000494297 LTV1Q96GA3 475 aaPredicted RBP7.3□□□□□ -1.24
SRPRB-205ENST00000494297 NBPF4Q96M43 638 aa7.3□□□□□ -1.24
SRPRB-205ENST00000494297 ANKRD26Q9UPS8 1709 aa7.3□□□□□ -1.24
SRPRB-205ENST00000494297 DISP2A7MBM2 1401 aa7.29□□□□□ -1.24
SRPRB-205ENST00000494297 LTN1O94822 1766 aa7.29□□□□□ -1.24
SRPRB-205ENST00000494297 EXOC5O00471 708 aa7.29□□□□□ -1.24
SRPRB-205ENST00000494297 IL2RBP14784 551 aa7.29□□□□□ -1.24
SRPRB-205ENST00000494297 PDE3BQ13370 1112 aa7.29□□□□□ -1.24
SRPRB-205ENST00000494297 CCDC125Q86Z20 511 aa7.29□□□□□ -1.24
SRPRB-205ENST00000494297 RASEFQ8IZ41 740 aa7.29□□□□□ -1.24
SRPRB-205ENST00000494297 UPF1Q92900 1129 aaKnown RBP eCLIP7.29□□□□□ -1.24
SRPRB-205ENST00000494297 METRNQ9UJH8 293 aa7.29□□□□□ -1.24
SRPRB-205ENST00000494297 THSD7AQ9UPZ6 1657 aa7.28□□□□□ -1.24
SRPRB-205ENST00000494297 RGPD5Q99666 1765 aa7.28□□□□□ -1.24
SRPRB-205ENST00000494297 PEAK1Q9H792 1746 aa7.28□□□□□ -1.24
SRPRB-205ENST00000494297 A0A0G2JS52 829 aa7.28□□□□□ -1.24
SRPRB-205ENST00000494297 IL13P35225 146 aa7.28□□□□□ -1.24
SRPRB-205ENST00000494297 MYT1Q01538 1121 aa7.28□□□□□ -1.24
SRPRB-205ENST00000494297 EIF4A2Q14240 407 aaKnown RBP7.28□□□□□ -1.24
SRPRB-205ENST00000494297 DDB1Q16531 1140 aa7.28□□□□□ -1.24
SRPRB-205ENST00000494297 CDAN1Q8IWY9 1227 aa7.28□□□□□ -1.24
SRPRB-205ENST00000494297 EYA1Q99502 592 aa7.28□□□□□ -1.24
SRPRB-205ENST00000494297 NCAPD2Q15021 1401 aa7.27□□□□□ -1.24
SRPRB-205ENST00000494297 MAP3K13O43283 966 aa7.27□□□□□ -1.25
SRPRB-205ENST00000494297 ATMINO43313 823 aaPredicted RBP7.27□□□□□ -1.25
SRPRB-205ENST00000494297 PPP2R1AP30153 589 aa7.27□□□□□ -1.25
SRPRB-205ENST00000494297 RALBP1Q15311 655 aa7.27□□□□□ -1.25
SRPRB-205ENST00000494297 FAM196AQ6ZSG2 479 aa7.27□□□□□ -1.25
SRPRB-205ENST00000494297 KIF12Q96FN5 646 aa7.27□□□□□ -1.25
SRPRB-205ENST00000494297 MAP2P11137 1827 aaKnown RBP7.27□□□□□ -1.25
SRPRB-205ENST00000494297 IGSF1Q8N6C5 1336 aa7.27□□□□□ -1.25
SRPRB-205ENST00000494297 PARD3Q8TEW0 1356 aa7.26□□□□□ -1.25
SRPRB-205ENST00000494297 DIAPH1O60610 1272 aaKnown RBP7.26□□□□□ -1.25
SRPRB-205ENST00000494297 TATP17735 454 aaPredicted RBP7.26□□□□□ -1.25
SRPRB-205ENST00000494297 MARCH10Q8NA82 808 aaPredicted RBP7.26□□□□□ -1.25
SRPRB-205ENST00000494297 RAPGEF4Q8WZA2 1011 aa7.26□□□□□ -1.25
SRPRB-205ENST00000494297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.26□□□□□ -1.25
SRPRB-205ENST00000494297 ZBTB47Q9UFB7 747 aaPredicted RBP7.26□□□□□ -1.25
SRPRB-205ENST00000494297 BCL9O00512 1426 aa7.26□□□□□ -1.25
SRPRB-205ENST00000494297 FAM208AQ9UK61 1670 aaKnown RBP7.25□□□□□ -1.25
SRPRB-205ENST00000494297 PLEKHG2Q9H7P9 1386 aa7.25□□□□□ -1.25
SRPRB-205ENST00000494297 PARP4Q9UKK3 1724 aaKnown RBP7.25□□□□□ -1.25
SRPRB-205ENST00000494297 CNGB1Q14028 1251 aaPredicted RBP7.25□□□□□ -1.25
SRPRB-205ENST00000494297 FAM182BQ5T319 152 aa7.25□□□□□ -1.25
SRPRB-205ENST00000494297 ASTLQ6HA08 431 aaPredicted RBP7.25□□□□□ -1.25
SRPRB-205ENST00000494297 USHBP1Q8N6Y0 703 aa7.25□□□□□ -1.25
SRPRB-205ENST00000494297 ZCRB1Q8TBF4 217 aaKnown RBP7.25□□□□□ -1.25
SRPRB-205ENST00000494297 SLC39A7Q92504 469 aa7.25□□□□□ -1.25
SRPRB-205ENST00000494297 C7P10643 843 aa7.24□□□□□ -1.25
SRPRB-205ENST00000494297 ATN1P54259 1190 aaPredicted RBP7.24□□□□□ -1.25
SRPRB-205ENST00000494297 CFAP53Q96M91 514 aa7.24□□□□□ -1.25
SRPRB-205ENST00000494297 OVOS2A0A0G2JMS6 1433 aa7.24□□□□□ -1.25
SRPRB-205ENST00000494297 TNS2Q63HR2 1409 aa7.24□□□□□ -1.25
SRPRB-205ENST00000494297 BRWD3Q6RI45 1802 aa7.24□□□□□ -1.25
SRPRB-205ENST00000494297 KDRP35968 1356 aa7.23□□□□□ -1.25
SRPRB-205ENST00000494297 MEGF6O75095 1541 aa7.23□□□□□ -1.25
SRPRB-205ENST00000494297 NKX1-1Q15270 411 aaPredicted RBP7.23□□□□□ -1.25
SRPRB-205ENST00000494297 AMOTQ4VCS5 1084 aa7.23□□□□□ -1.25
SRPRB-205ENST00000494297 SULT6B1Q6IMI4 303 aa7.23□□□□□ -1.25
SRPRB-205ENST00000494297 DDX54Q8TDD1 881 aaKnown RBP7.23□□□□□ -1.25
SRPRB-205ENST00000494297 PRKRIP1Q9H875 184 aaPredicted RBP7.23□□□□□ -1.25
SRPRB-205ENST00000494297 SPG7Q9UQ90 795 aa7.23□□□□□ -1.25
SRPRB-205ENST00000494297 TRPC6Q9Y210 931 aa7.23□□□□□ -1.25
SRPRB-205ENST00000494297 LRRC37A3O60309 1634 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms