RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 PARP4Q9UKK3 1724 aaKnown RBP16.19■□□□□ 0.18
RHBDF1-211ENST00000493647 TNS2Q63HR2 1409 aa16.19■□□□□ 0.18
RHBDF1-211ENST00000493647 ILDR2Q71H61 639 aa16.18■□□□□ 0.18
RHBDF1-211ENST00000493647 PRKAR2BP31323 418 aa16.17■□□□□ 0.18
RHBDF1-211ENST00000493647 DDB1Q16531 1140 aa16.17■□□□□ 0.18
RHBDF1-211ENST00000493647 ZCRB1Q8TBF4 217 aaKnown RBP16.17■□□□□ 0.18
RHBDF1-211ENST00000493647 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
RHBDF1-211ENST00000493647 CCER2I3L3R5 266 aa16.16■□□□□ 0.18
RHBDF1-211ENST00000493647 EXOC5O00471 708 aa16.16■□□□□ 0.18
RHBDF1-211ENST00000493647 FCHSD2O94868 740 aa16.16■□□□□ 0.18
RHBDF1-211ENST00000493647 MARCH10Q8NA82 808 aaPredicted RBP16.16■□□□□ 0.18
RHBDF1-211ENST00000493647 ADAMTS8Q9UP79 889 aa16.16■□□□□ 0.18
RHBDF1-211ENST00000493647 WDR43Q15061 677 aaKnown RBP eCLIP16.15■□□□□ 0.18
RHBDF1-211ENST00000493647 FAM182BQ5T319 152 aa16.15■□□□□ 0.18
RHBDF1-211ENST00000493647 KRT27Q7Z3Y8 459 aa16.15■□□□□ 0.18
RHBDF1-211ENST00000493647 PHACTR3Q96KR7 559 aa16.15■□□□□ 0.18
RHBDF1-211ENST00000493647 PLEKHF1Q96S99 279 aa16.15■□□□□ 0.18
RHBDF1-211ENST00000493647 PLEKHG2Q9H7P9 1386 aa16.14■□□□□ 0.17
RHBDF1-211ENST00000493647 CYP27B1O15528 508 aa16.14■□□□□ 0.17
RHBDF1-211ENST00000493647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.14■□□□□ 0.17
RHBDF1-211ENST00000493647 BRWD3Q6RI45 1802 aa16.14■□□□□ 0.17
RHBDF1-211ENST00000493647 PKD1L3Q7Z443 1732 aa16.14■□□□□ 0.17
RHBDF1-211ENST00000493647 SHANK3Q9BYB0 1731 aa16.14■□□□□ 0.17
RHBDF1-211ENST00000493647 PDE3BQ13370 1112 aa16.13■□□□□ 0.17
RHBDF1-211ENST00000493647 PLEKHO1Q53GL0 409 aaPredicted RBP16.13■□□□□ 0.17
RHBDF1-211ENST00000493647 DDX54Q8TDD1 881 aaKnown RBP16.13■□□□□ 0.17
RHBDF1-211ENST00000493647 MTHFSDQ2M296 383 aaKnown RBP16.12■□□□□ 0.17
RHBDF1-211ENST00000493647 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
RHBDF1-211ENST00000493647 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
RHBDF1-211ENST00000493647 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
RHBDF1-211ENST00000493647 CCDC146Q8IYE0 955 aa16.11■□□□□ 0.17
RHBDF1-211ENST00000493647 PCDH11XQ9BZA7 1347 aa16.11■□□□□ 0.17
RHBDF1-211ENST00000493647 PCDH11YQ9BZA8 1340 aa16.11■□□□□ 0.17
RHBDF1-211ENST00000493647 PHKG2P15735 406 aa16.1■□□□□ 0.17
RHBDF1-211ENST00000493647 FAM9BQ8IZU0 186 aa16.08■□□□□ 0.16
RHBDF1-211ENST00000493647 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
RHBDF1-211ENST00000493647 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
RHBDF1-211ENST00000493647 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
RHBDF1-211ENST00000493647 BCL9O00512 1426 aa16.07■□□□□ 0.16
RHBDF1-211ENST00000493647 KDM6AO15550 1401 aaPredicted RBP16.06■□□□□ 0.16
RHBDF1-211ENST00000493647 GAS2L2Q8NHY3 880 aa16.06■□□□□ 0.16
RHBDF1-211ENST00000493647 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
RHBDF1-211ENST00000493647 MAPK8IP3Q9UPT6 1336 aa16.05■□□□□ 0.16
RHBDF1-211ENST00000493647 NFE2L2Q16236 605 aa16.05■□□□□ 0.16
RHBDF1-211ENST00000493647 AKAP4Q5JQC9 854 aa16.05■□□□□ 0.16
RHBDF1-211ENST00000493647 FAM196AQ6ZSG2 479 aa16.05■□□□□ 0.16
RHBDF1-211ENST00000493647 PTF1AQ7RTS3 328 aa16.05■□□□□ 0.16
RHBDF1-211ENST00000493647 MAP3K5Q99683 1374 aa16.04■□□□□ 0.16
RHBDF1-211ENST00000493647 C1orf141Q5JVX7 400 aa16.04■□□□□ 0.16
RHBDF1-211ENST00000493647 MPRIPQ6WCQ1 1025 aa16.04■□□□□ 0.16
RHBDF1-211ENST00000493647 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
RHBDF1-211ENST00000493647 RRP7AQ9Y3A4 280 aaKnown RBP16.04■□□□□ 0.16
RHBDF1-211ENST00000493647 SENP3-EIF4A1A0A087X0R7 540 aa16.03■□□□□ 0.16
RHBDF1-211ENST00000493647 APAF1O14727 1248 aa16.03■□□□□ 0.16
RHBDF1-211ENST00000493647 KCNQ2O43526 872 aa16.03■□□□□ 0.16
RHBDF1-211ENST00000493647 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
RHBDF1-211ENST00000493647 LGR6Q9HBX8 967 aa16.03■□□□□ 0.16
RHBDF1-211ENST00000493647 TOGARAM1Q9Y4F4 1720 aa16.02■□□□□ 0.16
RHBDF1-211ENST00000493647 GNAT3A8MTJ3 354 aa16.02■□□□□ 0.16
RHBDF1-211ENST00000493647 RNMTO43148 476 aaKnown RBP16.02■□□□□ 0.16
RHBDF1-211ENST00000493647 NEFMP07197 916 aa16.02■□□□□ 0.16
RHBDF1-211ENST00000493647 DCAF5Q96JK2 942 aa16.02■□□□□ 0.16
RHBDF1-211ENST00000493647 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
RHBDF1-211ENST00000493647 PRIM1P49642 420 aaKnown RBP16.01■□□□□ 0.15
RHBDF1-211ENST00000493647 IL17REQ8NFR9 667 aa16.01■□□□□ 0.15
RHBDF1-211ENST00000493647 ADAMTS7Q9UKP4 1686 aa16■□□□□ 0.15
RHBDF1-211ENST00000493647 TRIM37O94972 964 aa16■□□□□ 0.15
RHBDF1-211ENST00000493647 DCTN1Q14203 1278 aa16■□□□□ 0.15
RHBDF1-211ENST00000493647 DOT1LQ8TEK3 1739 aa15.99■□□□□ 0.15
RHBDF1-211ENST00000493647 RIPK4P57078 832 aa15.99■□□□□ 0.15
RHBDF1-211ENST00000493647 NEUROD2Q15784 382 aa15.99■□□□□ 0.15
RHBDF1-211ENST00000493647 MCM10Q7L590 875 aa15.99■□□□□ 0.15
RHBDF1-211ENST00000493647 TRIM35Q9UPQ4 493 aa15.99■□□□□ 0.15
RHBDF1-211ENST00000493647 CEMIPQ8WUJ3 1361 aa15.99■□□□□ 0.15
RHBDF1-211ENST00000493647 HTATSF1O43719 755 aaKnown RBP15.98■□□□□ 0.15
RHBDF1-211ENST00000493647 THUMPD2Q9BTF0 503 aaKnown RBP15.98■□□□□ 0.15
RHBDF1-211ENST00000493647 BCL11BQ9C0K0 894 aaPredicted RBP15.98■□□□□ 0.15
RHBDF1-211ENST00000493647 NHSQ6T4R5 1651 aa15.98■□□□□ 0.15
RHBDF1-211ENST00000493647 MRC1P22897 1456 aa15.97■□□□□ 0.15
RHBDF1-211ENST00000493647 ERVV-2B6SEH9 535 aa15.97■□□□□ 0.15
RHBDF1-211ENST00000493647 PIGBQ92521 554 aa15.97■□□□□ 0.15
RHBDF1-211ENST00000493647 UPF1Q92900 1129 aaKnown RBP eCLIP15.97■□□□□ 0.15
RHBDF1-211ENST00000493647 SYTL4Q96C24 671 aaPredicted RBP15.97■□□□□ 0.15
RHBDF1-211ENST00000493647 SBF2Q86WG5 1849 aa15.96■□□□□ 0.15
RHBDF1-211ENST00000493647 SLC52A2Q9HAB3 445 aa15.96■□□□□ 0.15
RHBDF1-211ENST00000493647 CABP4P57796 275 aa15.95■□□□□ 0.14
RHBDF1-211ENST00000493647 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
RHBDF1-211ENST00000493647 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
RHBDF1-211ENST00000493647 TMOD3Q9NYL9 352 aa15.95■□□□□ 0.14
RHBDF1-211ENST00000493647 SCN11AQ9UI33 1791 aa15.95■□□□□ 0.14
RHBDF1-211ENST00000493647 DLG5Q8TDM6 1919 aa15.94■□□□□ 0.14
RHBDF1-211ENST00000493647 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
RHBDF1-211ENST00000493647 EP400Q96L91 3159 aa15.93■□□□□ 0.14
RHBDF1-211ENST00000493647 ITGB4P16144 1822 aa15.92■□□□□ 0.14
RHBDF1-211ENST00000493647 APBA3O96018 575 aa15.92■□□□□ 0.14
RHBDF1-211ENST00000493647 LMOD3Q0VAK6 560 aa15.92■□□□□ 0.14
RHBDF1-211ENST00000493647 ASAP1Q9ULH1 1129 aa15.92■□□□□ 0.14
RHBDF1-211ENST00000493647 SALL2Q9Y467 1007 aaPredicted RBP15.92■□□□□ 0.14
RHBDF1-211ENST00000493647 TEFQ10587 303 aa15.91■□□□□ 0.14
RHBDF1-211ENST00000493647 CCDC27Q2M243 656 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms