RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 CUX1P39880 1505 aa8.76□□□□□ -1.01
CCNB3-208ENST00000493507 PIK3CDO00329 1044 aa8.76□□□□□ -1.01
CCNB3-208ENST00000493507 ATP9BO43861 1147 aa8.76□□□□□ -1.01
CCNB3-208ENST00000493507 WDR4P57081 412 aaKnown RBP8.76□□□□□ -1.01
CCNB3-208ENST00000493507 CCDC85AQ96PX6 553 aaPredicted RBP8.76□□□□□ -1.01
CCNB3-208ENST00000493507 ESF1Q9H501 851 aaKnown RBP8.76□□□□□ -1.01
CCNB3-208ENST00000493507 TFIP11Q9UBB9 837 aaKnown RBP8.76□□□□□ -1.01
CCNB3-208ENST00000493507 EIF4G3O43432 1585 aaKnown RBP8.75□□□□□ -1.01
CCNB3-208ENST00000493507 PALM3A6NDB9 673 aaPredicted RBP8.75□□□□□ -1.01
CCNB3-208ENST00000493507 AVPP01185 164 aa8.75□□□□□ -1.01
CCNB3-208ENST00000493507 MYT1Q01538 1121 aa8.75□□□□□ -1.01
CCNB3-208ENST00000493507 USP4Q13107 963 aa8.75□□□□□ -1.01
CCNB3-208ENST00000493507 TBC1D9Q6ZT07 1266 aa8.75□□□□□ -1.01
CCNB3-208ENST00000493507 SIRT1Q96EB6 747 aa8.75□□□□□ -1.01
CCNB3-208ENST00000493507 KLF16Q9BXK1 252 aaPredicted RBP8.75□□□□□ -1.01
CCNB3-208ENST00000493507 C1orf115Q9H7X2 142 aa8.75□□□□□ -1.01
CCNB3-208ENST00000493507 ZNF608Q9ULD9 1512 aaPredicted RBP8.75□□□□□ -1.01
CCNB3-208ENST00000493507 USP17L5A8MUK1 530 aa8.74□□□□□ -1.01
CCNB3-208ENST00000493507 MYCP01106 439 aaPredicted RBP8.74□□□□□ -1.01
CCNB3-208ENST00000493507 CTC1Q2NKJ3 1217 aa8.74□□□□□ -1.01
CCNB3-208ENST00000493507 TMPRSS4Q9NRS4 437 aa8.74□□□□□ -1.01
CCNB3-208ENST00000493507 ZIC2O95409 532 aaPredicted RBP8.73□□□□□ -1.01
CCNB3-208ENST00000493507 TSGA10IPQ3SY00 556 aa8.73□□□□□ -1.01
CCNB3-208ENST00000493507 TRAF7Q6Q0C0 670 aa8.73□□□□□ -1.01
CCNB3-208ENST00000493507 PLEKHM2Q8IWE5 1019 aa8.73□□□□□ -1.01
CCNB3-208ENST00000493507 CCDC82Q8N4S0 544 aa8.73□□□□□ -1.01
CCNB3-208ENST00000493507 ZNF784Q8NCA9 323 aaPredicted RBP8.73□□□□□ -1.01
CCNB3-208ENST00000493507 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
CCNB3-208ENST00000493507 CAPN5O15484 640 aaPredicted RBP8.72□□□□□ -1.01
CCNB3-208ENST00000493507 TIMP2P16035 220 aa8.72□□□□□ -1.01
CCNB3-208ENST00000493507 ERVK-9P63128 1117 aa8.72□□□□□ -1.01
CCNB3-208ENST00000493507 EML3Q32P44 896 aa8.72□□□□□ -1.01
CCNB3-208ENST00000493507 OXLD1Q5BKU9 147 aa8.72□□□□□ -1.01
CCNB3-208ENST00000493507 CC2D2BQ6DHV5 1058 aa8.72□□□□□ -1.01
CCNB3-208ENST00000493507 MAFBQ9Y5Q3 323 aaPredicted RBP8.72□□□□□ -1.01
CCNB3-208ENST00000493507 POLA1P09884 1462 aaPredicted RBP8.71□□□□□ -1.01
CCNB3-208ENST00000493507 SYNJ1O43426 1573 aa8.71□□□□□ -1.02
CCNB3-208ENST00000493507 ABCC8Q09428 1581 aa8.71□□□□□ -1.02
CCNB3-208ENST00000493507 USP17L3A6NCW0 530 aa8.71□□□□□ -1.02
CCNB3-208ENST00000493507 USP17L4A6NCW7 530 aa8.71□□□□□ -1.02
CCNB3-208ENST00000493507 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
CCNB3-208ENST00000493507 USP17L2Q6R6M4 530 aa8.71□□□□□ -1.02
CCNB3-208ENST00000493507 USP17L1Q7RTZ2 530 aa8.71□□□□□ -1.02
CCNB3-208ENST00000493507 CDCA7Q9BWT1 371 aaPredicted RBP8.71□□□□□ -1.02
CCNB3-208ENST00000493507 CYLDQ9NQC7 956 aa8.71□□□□□ -1.02
CCNB3-208ENST00000493507 BIVM-ERCC5R4GMW8 1640 aa8.7□□□□□ -1.02
CCNB3-208ENST00000493507 LILRA1O75019 489 aa8.7□□□□□ -1.02
CCNB3-208ENST00000493507 LMOD1P29536 600 aaPredicted RBP8.7□□□□□ -1.02
CCNB3-208ENST00000493507 NCOA4Q13772 614 aa8.7□□□□□ -1.02
CCNB3-208ENST00000493507 CRIPAKQ8N1N5 446 aa8.7□□□□□ -1.02
CCNB3-208ENST00000493507 ZFAND3Q9H8U3 227 aa8.7□□□□□ -1.02
CCNB3-208ENST00000493507 NOD1Q9Y239 953 aa8.7□□□□□ -1.02
CCNB3-208ENST00000493507 CHD1O14646 1710 aa8.7□□□□□ -1.02
CCNB3-208ENST00000493507 AXIN1O15169 862 aa8.69□□□□□ -1.02
CCNB3-208ENST00000493507 CFAP70Q5T0N1 1121 aa8.69□□□□□ -1.02
CCNB3-208ENST00000493507 Q6ZVU0 165 aa8.69□□□□□ -1.02
CCNB3-208ENST00000493507 DEPDC4Q8N2C3 294 aa8.69□□□□□ -1.02
CCNB3-208ENST00000493507 SCTRP47872 440 aa8.68□□□□□ -1.02
CCNB3-208ENST00000493507 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
CCNB3-208ENST00000493507 FGD5Q6ZNL6 1462 aa8.68□□□□□ -1.02
CCNB3-208ENST00000493507 RAD54L2Q9Y4B4 1467 aa8.68□□□□□ -1.02
CCNB3-208ENST00000493507 ATP5J2-PTCD1G3V325 749 aa8.67□□□□□ -1.02
CCNB3-208ENST00000493507 ADD1P35611 737 aaKnown RBP8.67□□□□□ -1.02
CCNB3-208ENST00000493507 CBLBQ13191 982 aa8.67□□□□□ -1.02
CCNB3-208ENST00000493507 CYP2U1Q7Z449 544 aa8.67□□□□□ -1.02
CCNB3-208ENST00000493507 PBRM1Q86U86 1689 aa8.67□□□□□ -1.02
CCNB3-208ENST00000493507 MKRN1Q9UHC7 482 aaKnown RBP8.67□□□□□ -1.02
CCNB3-208ENST00000493507 UPP2O95045 317 aa8.66□□□□□ -1.02
CCNB3-208ENST00000493507 ADH1AP07327 375 aa8.66□□□□□ -1.02
CCNB3-208ENST00000493507 RFX1P22670 979 aa8.66□□□□□ -1.02
CCNB3-208ENST00000493507 ATP1A2P50993 1020 aa8.66□□□□□ -1.02
CCNB3-208ENST00000493507 CYB5RLQ6IPT4 315 aa8.66□□□□□ -1.02
CCNB3-208ENST00000493507 Q6ZNB5 142 aa8.66□□□□□ -1.02
CCNB3-208ENST00000493507 MEIOBQ8N635 442 aa8.66□□□□□ -1.02
CCNB3-208ENST00000493507 TSEN34Q9BSV6 310 aaKnown RBP8.66□□□□□ -1.02
CCNB3-208ENST00000493507 OSBPL3Q9H4L5 887 aa8.66□□□□□ -1.02
CCNB3-208ENST00000493507 VRTNQ9H8Y1 702 aa8.66□□□□□ -1.02
CCNB3-208ENST00000493507 ABCA5Q8WWZ7 1642 aa8.65□□□□□ -1.02
CCNB3-208ENST00000493507 IFT140Q96RY7 1462 aa8.65□□□□□ -1.02
CCNB3-208ENST00000493507 ARID3AQ99856 593 aa8.65□□□□□ -1.02
CCNB3-208ENST00000493507 RIMBP3CA6NJZ7 1639 aa8.65□□□□□ -1.03
CCNB3-208ENST00000493507 RIMBP3BA6NNM3 1639 aa8.65□□□□□ -1.03
CCNB3-208ENST00000493507 RIMBP3Q9UFD9 1639 aa8.65□□□□□ -1.03
CCNB3-208ENST00000493507 GTF2IP78347 998 aa8.64□□□□□ -1.03
CCNB3-208ENST00000493507 KANK4Q5T7N3 995 aaPredicted RBP8.64□□□□□ -1.03
CCNB3-208ENST00000493507 AAASQ9NRG9 546 aa8.64□□□□□ -1.03
CCNB3-208ENST00000493507 TOP2BQ02880 1626 aa8.64□□□□□ -1.03
CCNB3-208ENST00000493507 PPP1R15AO75807 674 aaPredicted RBP8.63□□□□□ -1.03
CCNB3-208ENST00000493507 GNRH1P01148 92 aa8.63□□□□□ -1.03
CCNB3-208ENST00000493507 MRPL14Q6P1L8 145 aaKnown RBP8.63□□□□□ -1.03
CCNB3-208ENST00000493507 LARP1Q6PKG0 1096 aaKnown RBP8.63□□□□□ -1.03
CCNB3-208ENST00000493507 PBXIP1Q96AQ6 731 aa8.63□□□□□ -1.03
CCNB3-208ENST00000493507 RASA1P20936 1047 aa8.62□□□□□ -1.03
CCNB3-208ENST00000493507 PTGIRP43119 386 aa8.62□□□□□ -1.03
CCNB3-208ENST00000493507 PSME1Q06323 249 aa8.62□□□□□ -1.03
CCNB3-208ENST00000493507 SCARF1Q14162 830 aa8.62□□□□□ -1.03
CCNB3-208ENST00000493507 LINC00528Q8N1L1 170 aa8.62□□□□□ -1.03
CCNB3-208ENST00000493507 LARGE2Q8N3Y3 721 aa8.62□□□□□ -1.03
CCNB3-208ENST00000493507 OGFOD1Q8N543 542 aa8.62□□□□□ -1.03
CCNB3-208ENST00000493507 AGBL1Q96MI9 1066 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms