RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 RSPH6AQ9H0K4 717 aa6.58□□□□□ -1.36
R3HDM1-219ENST00000488035 ZNF395Q9H8N7 513 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-219ENST00000488035 GPSM3Q9Y4H4 160 aa6.58□□□□□ -1.36
R3HDM1-219ENST00000488035 CLK2P49760 499 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-219ENST00000488035 FOXD4L5Q5VV16 416 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-219ENST00000488035 LYSMD3Q7Z3D4 306 aa6.57□□□□□ -1.36
R3HDM1-219ENST00000488035 TRIM22Q8IYM9 498 aa6.57□□□□□ -1.36
R3HDM1-219ENST00000488035 ZNF837Q96EG3 531 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-219ENST00000488035 ADH1AP07327 375 aa6.56□□□□□ -1.36
R3HDM1-219ENST00000488035 KDF1Q8NAX2 398 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-219ENST00000488035 PNMA1Q8ND90 353 aa6.55□□□□□ -1.36
R3HDM1-219ENST00000488035 NEDD1Q8NHV4 660 aa6.55□□□□□ -1.36
R3HDM1-219ENST00000488035 OIP5O43482 229 aa6.54□□□□□ -1.36
R3HDM1-219ENST00000488035 PTGIRP43119 386 aa6.54□□□□□ -1.36
R3HDM1-219ENST00000488035 CTDSPL2Q05D32 466 aa6.54□□□□□ -1.36
R3HDM1-219ENST00000488035 FURINP09958 794 aa6.53□□□□□ -1.36
R3HDM1-219ENST00000488035 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
R3HDM1-219ENST00000488035 ZNF784Q8NCA9 323 aaPredicted RBP6.53□□□□□ -1.36
R3HDM1-219ENST00000488035 ITGB7P26010 798 aa6.52□□□□□ -1.37
R3HDM1-219ENST00000488035 RNF144AP50876 292 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-219ENST00000488035 PDE4DQ08499 809 aa6.52□□□□□ -1.37
R3HDM1-219ENST00000488035 ADAM32Q8TC27 787 aa6.52□□□□□ -1.37
R3HDM1-219ENST00000488035 KRTAP9-9Q9BYP9 154 aa6.52□□□□□ -1.37
R3HDM1-219ENST00000488035 KRTAP9-4Q9BYQ2 154 aa6.52□□□□□ -1.37
R3HDM1-219ENST00000488035 TMPRSS4Q9NRS4 437 aa6.52□□□□□ -1.37
R3HDM1-219ENST00000488035 NSFL1CQ9UNZ2 370 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-219ENST00000488035 H7C1W4 665 aa6.51□□□□□ -1.37
R3HDM1-219ENST00000488035 LILRA1O75019 489 aa6.51□□□□□ -1.37
R3HDM1-219ENST00000488035 COL8A1P27658 744 aa6.51□□□□□ -1.37
R3HDM1-219ENST00000488035 DBN1Q16643 649 aa6.51□□□□□ -1.37
R3HDM1-219ENST00000488035 TRERF1Q96PN7 1200 aa6.51□□□□□ -1.37
R3HDM1-219ENST00000488035 ERVH48-1M5A8F1 160 aa6.5□□□□□ -1.37
R3HDM1-219ENST00000488035 RAB15P59190 212 aa6.5□□□□□ -1.37
R3HDM1-219ENST00000488035 SNRPNP63162 240 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-219ENST00000488035 PPP2R2DQ66LE6 453 aa6.5□□□□□ -1.37
R3HDM1-219ENST00000488035 PRICKLE2Q7Z3G6 844 aa6.5□□□□□ -1.37
R3HDM1-219ENST00000488035 DZIP3Q86Y13 1208 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-219ENST00000488035 LRRN4Q8WUT4 740 aa6.5□□□□□ -1.37
R3HDM1-219ENST00000488035 POLR3EQ9NVU0 708 aa6.5□□□□□ -1.37
R3HDM1-219ENST00000488035 GPC1P35052 558 aa6.49□□□□□ -1.37
R3HDM1-219ENST00000488035 ADD1P35611 737 aaKnown RBP6.49□□□□□ -1.37
R3HDM1-219ENST00000488035 NR6A1Q15406 480 aa6.49□□□□□ -1.37
R3HDM1-219ENST00000488035 RIPOR1Q6ZS17 1223 aa6.49□□□□□ -1.37
R3HDM1-219ENST00000488035 SEPT12Q8IYM1 358 aa6.49□□□□□ -1.37
R3HDM1-219ENST00000488035 OCSTAMPQ9BR26 566 aa6.49□□□□□ -1.37
R3HDM1-219ENST00000488035 MKL2Q9ULH7 1088 aa6.49□□□□□ -1.37
R3HDM1-219ENST00000488035 GPR25O00155 361 aa6.48□□□□□ -1.37
R3HDM1-219ENST00000488035 DYRK1BQ9Y463 629 aa6.48□□□□□ -1.37
R3HDM1-219ENST00000488035 ESPNB1AK53 854 aa6.47□□□□□ -1.37
R3HDM1-219ENST00000488035 RHOQP17081 205 aa6.47□□□□□ -1.37
R3HDM1-219ENST00000488035 MAP2K3P46734 347 aa6.47□□□□□ -1.37
R3HDM1-219ENST00000488035 ATP5J2-PTCD1G3V325 749 aa6.46□□□□□ -1.38
R3HDM1-219ENST00000488035 HOXB4P17483 251 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-219ENST00000488035 MX2P20592 715 aa6.46□□□□□ -1.38
R3HDM1-219ENST00000488035 CCDC125Q86Z20 511 aa6.46□□□□□ -1.38
R3HDM1-219ENST00000488035 GTPBP3Q969Y2 492 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-219ENST00000488035 OXCT2Q9BYC2 517 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-219ENST00000488035 SLC24A3Q9HC58 644 aa6.46□□□□□ -1.38
R3HDM1-219ENST00000488035 SHISA8B8ZZ34 492 aa6.45□□□□□ -1.38
R3HDM1-219ENST00000488035 LINC00114Q6XXX2 140 aa6.45□□□□□ -1.38
R3HDM1-219ENST00000488035 CYLDQ9NQC7 956 aa6.45□□□□□ -1.38
R3HDM1-219ENST00000488035 MEN1O00255 615 aa6.44□□□□□ -1.38
R3HDM1-219ENST00000488035 SKIV2LQ15477 1246 aaKnown RBP6.44□□□□□ -1.38
R3HDM1-219ENST00000488035 WDR44Q5JSH3 913 aa6.44□□□□□ -1.38
R3HDM1-219ENST00000488035 SLC27A3Q5K4L6 730 aa6.44□□□□□ -1.38
R3HDM1-219ENST00000488035 GAS2L1Q99501 681 aaPredicted RBP6.44□□□□□ -1.38
R3HDM1-219ENST00000488035 C1orf229Q6ZS94 237 aaPredicted RBP6.43□□□□□ -1.38
R3HDM1-219ENST00000488035 NLRP3Q96P20 1036 aa6.43□□□□□ -1.38
R3HDM1-219ENST00000488035 CFHR5Q9BXR6 569 aa6.43□□□□□ -1.38
R3HDM1-219ENST00000488035 ATP1B4Q9UN42 357 aaPredicted RBP6.43□□□□□ -1.38
R3HDM1-219ENST00000488035 A0A1W2PRU2 124 aa6.42□□□□□ -1.38
R3HDM1-219ENST00000488035 C1QTNF9BB2RNN3 333 aa6.42□□□□□ -1.38
R3HDM1-219ENST00000488035 AP1G2O75843 785 aa6.42□□□□□ -1.38
R3HDM1-219ENST00000488035 POU4F2Q12837 409 aa6.42□□□□□ -1.38
R3HDM1-219ENST00000488035 CD163Q86VB7 1156 aa6.42□□□□□ -1.38
R3HDM1-219ENST00000488035 NUCKS1Q9H1E3 243 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-219ENST00000488035 GDF2Q9UK05 429 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-219ENST00000488035 PIK3R2O00459 728 aa6.41□□□□□ -1.38
R3HDM1-219ENST00000488035 F11P03951 625 aa6.41□□□□□ -1.38
R3HDM1-219ENST00000488035 NBPF10Q6P3W6 841 aaKnown RBP6.41□□□□□ -1.38
R3HDM1-219ENST00000488035 NBPF15Q8N660 670 aa6.41□□□□□ -1.38
R3HDM1-219ENST00000488035 PHF24Q9UPV7 400 aa6.41□□□□□ -1.38
R3HDM1-219ENST00000488035 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
R3HDM1-219ENST00000488035 SPATA31C2B4DYI2 1134 aa6.4□□□□□ -1.38
R3HDM1-219ENST00000488035 SH3D19Q5HYK7 790 aa6.4□□□□□ -1.38
R3HDM1-219ENST00000488035 TIMMDC1Q9NPL8 285 aa6.4□□□□□ -1.38
R3HDM1-219ENST00000488035 THBS1P07996 1170 aa6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 BRPF1P55201 1214 aaPredicted RBP6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 CLN3Q13286 438 aa6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 ZMYM1Q5SVZ6 1142 aa6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 RNF20Q5VTR2 975 aa6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 TAS1R3Q7RTX0 852 aa6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 CYP2U1Q7Z449 544 aa6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 EDARADDQ8WWZ3 215 aa6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 KLRG1Q96E93 195 aa6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 GRIP2Q9C0E4 1043 aa6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 SUV39H2Q9H5I1 410 aa6.39□□□□□ -1.39
R3HDM1-219ENST00000488035 BTBD11A6QL63 1104 aa6.38□□□□□ -1.39
R3HDM1-219ENST00000488035 GNB5O14775 395 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms