RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PPP2R2DQ66LE6 453 aa8.53□□□□□ -1.04
HMGB1P36-201ENST00000487709 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P36-201ENST00000487709 GPR25O00155 361 aa8.52□□□□□ -1.05
HMGB1P36-201ENST00000487709 IGHA1P01876 353 aa8.51□□□□□ -1.05
HMGB1P36-201ENST00000487709 ZNF837Q96EG3 531 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P36-201ENST00000487709 FAM117AQ9C073 453 aa8.51□□□□□ -1.05
HMGB1P36-201ENST00000487709 ESPNB1AK53 854 aa8.5□□□□□ -1.05
HMGB1P36-201ENST00000487709 FOXK2Q01167 660 aa8.5□□□□□ -1.05
HMGB1P36-201ENST00000487709 RIPOR1Q6ZS17 1223 aa8.5□□□□□ -1.05
HMGB1P36-201ENST00000487709 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
HMGB1P36-201ENST00000487709 MEN1O00255 615 aa8.49□□□□□ -1.05
HMGB1P36-201ENST00000487709 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
HMGB1P36-201ENST00000487709 ENAMQ9NRM1 1142 aa8.49□□□□□ -1.05
HMGB1P36-201ENST00000487709 ATP5J2-PTCD1G3V325 749 aa8.48□□□□□ -1.05
HMGB1P36-201ENST00000487709 RNF144AP50876 292 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P36-201ENST00000487709 MBIPQ9NS73 344 aa8.48□□□□□ -1.05
HMGB1P36-201ENST00000487709 IGF1RP08069 1367 aa8.48□□□□□ -1.05
HMGB1P36-201ENST00000487709 FOXR1Q6PIV2 292 aa8.47□□□□□ -1.05
HMGB1P36-201ENST00000487709 TRIM22Q8IYM9 498 aa8.47□□□□□ -1.05
HMGB1P36-201ENST00000487709 CNTNAP5Q8WYK1 1306 aa8.47□□□□□ -1.05
HMGB1P36-201ENST00000487709 SEPT12Q8IYM1 358 aa8.46□□□□□ -1.06
HMGB1P36-201ENST00000487709 NEDD1Q8NHV4 660 aa8.46□□□□□ -1.06
HMGB1P36-201ENST00000487709 GTPBP3Q969Y2 492 aaKnown RBP8.46□□□□□ -1.06
HMGB1P36-201ENST00000487709 GAS2L1Q99501 681 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P36-201ENST00000487709 PCDHB9Q9Y5E1 797 aa8.46□□□□□ -1.06
HMGB1P36-201ENST00000487709 GIGYF1O75420 1035 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P36-201ENST00000487709 RFC5P40937 340 aa8.45□□□□□ -1.06
HMGB1P36-201ENST00000487709 DBN1Q16643 649 aa8.45□□□□□ -1.06
HMGB1P36-201ENST00000487709 PHF20L1A8MW92 1017 aa8.44□□□□□ -1.06
HMGB1P36-201ENST00000487709 PLA2G4EQ3MJ16 856 aa8.44□□□□□ -1.06
HMGB1P36-201ENST00000487709 SLC27A3Q5K4L6 730 aa8.44□□□□□ -1.06
HMGB1P36-201ENST00000487709 PODNQ7Z5L7 613 aa8.44□□□□□ -1.06
HMGB1P36-201ENST00000487709 DCAF5Q96JK2 942 aa8.44□□□□□ -1.06
HMGB1P36-201ENST00000487709 TRIM34Q9BYJ4 488 aa8.44□□□□□ -1.06
HMGB1P36-201ENST00000487709 A0A1W2PRU2 124 aa8.43□□□□□ -1.06
HMGB1P36-201ENST00000487709 POU4F2Q12837 409 aa8.43□□□□□ -1.06
HMGB1P36-201ENST00000487709 TRIM52Q96A61 297 aa8.43□□□□□ -1.06
HMGB1P36-201ENST00000487709 GMCL1Q96IK5 515 aa8.43□□□□□ -1.06
HMGB1P36-201ENST00000487709 TRERF1Q96PN7 1200 aa8.43□□□□□ -1.06
HMGB1P36-201ENST00000487709 MSTNO14793 375 aa8.42□□□□□ -1.06
HMGB1P36-201ENST00000487709 BCRP11274 1271 aa8.42□□□□□ -1.06
HMGB1P36-201ENST00000487709 GPC1P35052 558 aa8.42□□□□□ -1.06
HMGB1P36-201ENST00000487709 ACDQ96AP0 544 aa8.42□□□□□ -1.06
HMGB1P36-201ENST00000487709 NLRP3Q96P20 1036 aa8.42□□□□□ -1.06
HMGB1P36-201ENST00000487709 DYRK1BQ9Y463 629 aa8.42□□□□□ -1.06
HMGB1P36-201ENST00000487709 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
HMGB1P36-201ENST00000487709 H7C1W4 665 aa8.41□□□□□ -1.06
HMGB1P36-201ENST00000487709 BEND7Q8N7W2 519 aaPredicted RBP8.41□□□□□ -1.06
HMGB1P36-201ENST00000487709 FBXO45P0C2W1 286 aa8.4□□□□□ -1.06
HMGB1P36-201ENST00000487709 CC2D2BQ6DHV5 1058 aa8.4□□□□□ -1.06
HMGB1P36-201ENST00000487709 SPOCK3Q9BQ16 436 aa8.4□□□□□ -1.06
HMGB1P36-201ENST00000487709 MX2P20592 715 aa8.39□□□□□ -1.07
HMGB1P36-201ENST00000487709 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
HMGB1P36-201ENST00000487709 NBPF10Q6P3W6 841 aaKnown RBP8.39□□□□□ -1.07
HMGB1P36-201ENST00000487709 NBPF15Q8N660 670 aa8.39□□□□□ -1.07
HMGB1P36-201ENST00000487709 ITGB2P05107 769 aa8.38□□□□□ -1.07
HMGB1P36-201ENST00000487709 CYP2U1Q7Z449 544 aa8.38□□□□□ -1.07
HMGB1P36-201ENST00000487709 GALNT6Q8NCL4 622 aa8.38□□□□□ -1.07
HMGB1P36-201ENST00000487709 ARHGEF10LQ9HCE6 1279 aa8.38□□□□□ -1.07
HMGB1P36-201ENST00000487709 SCTRP47872 440 aa8.37□□□□□ -1.07
HMGB1P36-201ENST00000487709 NUCKS1Q9H1E3 243 aaKnown RBP8.37□□□□□ -1.07
HMGB1P36-201ENST00000487709 TIMMDC1Q9NPL8 285 aa8.37□□□□□ -1.07
HMGB1P36-201ENST00000487709 ADAM23O75077 832 aa8.36□□□□□ -1.07
HMGB1P36-201ENST00000487709 CLN3Q13286 438 aa8.36□□□□□ -1.07
HMGB1P36-201ENST00000487709 GRIP2Q9C0E4 1043 aa8.36□□□□□ -1.07
HMGB1P36-201ENST00000487709 RAB6BQ9NRW1 208 aa8.36□□□□□ -1.07
HMGB1P36-201ENST00000487709 NSFL1CQ9UNZ2 370 aaKnown RBP8.36□□□□□ -1.07
HMGB1P36-201ENST00000487709 PCDHB11Q9Y5F2 797 aa8.36□□□□□ -1.07
HMGB1P36-201ENST00000487709 WASLO00401 505 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P36-201ENST00000487709 PROCP04070 461 aa8.35□□□□□ -1.07
HMGB1P36-201ENST00000487709 RNF20Q5VTR2 975 aa8.35□□□□□ -1.07
HMGB1P36-201ENST00000487709 TAS1R3Q7RTX0 852 aa8.35□□□□□ -1.07
HMGB1P36-201ENST00000487709 GPAMQ9HCL2 828 aa8.35□□□□□ -1.07
HMGB1P36-201ENST00000487709 OIP5O43482 229 aa8.34□□□□□ -1.07
HMGB1P36-201ENST00000487709 F11P03951 625 aa8.34□□□□□ -1.07
HMGB1P36-201ENST00000487709 XP32Q5T750 250 aa8.34□□□□□ -1.07
HMGB1P36-201ENST00000487709 GJD4Q96KN9 370 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P36-201ENST00000487709 PCMTD1Q96MG8 357 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P36-201ENST00000487709 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
HMGB1P36-201ENST00000487709 SPATA31C2B4DYI2 1134 aa8.33□□□□□ -1.08
HMGB1P36-201ENST00000487709 SNRPNP63162 240 aaKnown RBP8.33□□□□□ -1.08
HMGB1P36-201ENST00000487709 TMEM259Q4ZIN3 620 aa8.33□□□□□ -1.08
HMGB1P36-201ENST00000487709 OXCT2Q9BYC2 517 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P36-201ENST00000487709 OSBPL3Q9H4L5 887 aa8.33□□□□□ -1.08
HMGB1P36-201ENST00000487709 PHKA2P46019 1235 aa8.32□□□□□ -1.08
HMGB1P36-201ENST00000487709 CCDC125Q86Z20 511 aa8.32□□□□□ -1.08
HMGB1P36-201ENST00000487709 MAP2K3P46734 347 aa8.31□□□□□ -1.08
HMGB1P36-201ENST00000487709 TPRNQ4KMQ1 711 aa8.31□□□□□ -1.08
HMGB1P36-201ENST00000487709 LRRC4BQ9NT99 713 aa8.31□□□□□ -1.08
HMGB1P36-201ENST00000487709 SHISA8B8ZZ34 492 aa8.3□□□□□ -1.08
HMGB1P36-201ENST00000487709 TRAK2O60296 914 aa8.3□□□□□ -1.08
HMGB1P36-201ENST00000487709 THBS1P07996 1170 aa8.3□□□□□ -1.08
HMGB1P36-201ENST00000487709 NR1H3Q13133 447 aa8.3□□□□□ -1.08
HMGB1P36-201ENST00000487709 WDR44Q5JSH3 913 aa8.3□□□□□ -1.08
HMGB1P36-201ENST00000487709 RRAGCQ9HB90 399 aa8.3□□□□□ -1.08
HMGB1P36-201ENST00000487709 KRBA1A5PL33 1030 aa8.29□□□□□ -1.08
HMGB1P36-201ENST00000487709 CNKSR1Q969H4 720 aa8.29□□□□□ -1.08
HMGB1P36-201ENST00000487709 K7ELQ4 463 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P36-201ENST00000487709 IL2RAP01589 272 aa8.28□□□□□ -1.08
HMGB1P36-201ENST00000487709 C1orf229Q6ZS94 237 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms