RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 SOX11P35716 441 aa10.44□□□□□ -0.74
CUL3-211ENST00000487558 GPR161Q8N6U8 529 aaKnown RBP10.44□□□□□ -0.74
CUL3-211ENST00000487558 ADAM32Q8TC27 787 aa10.44□□□□□ -0.74
CUL3-211ENST00000487558 GPR37L1O60883 481 aa10.43□□□□□ -0.74
CUL3-211ENST00000487558 ZBTB7CA1YPR0 619 aa10.42□□□□□ -0.74
CUL3-211ENST00000487558 KRT76Q01546 638 aa10.42□□□□□ -0.74
CUL3-211ENST00000487558 AGBL1Q96MI9 1066 aa10.42□□□□□ -0.74
CUL3-211ENST00000487558 TRAIPQ9BWF2 469 aa10.42□□□□□ -0.74
CUL3-211ENST00000487558 PDE4CQ08493 712 aa10.41□□□□□ -0.74
CUL3-211ENST00000487558 NANOS1Q8WY41 292 aaKnown RBP10.41□□□□□ -0.74
CUL3-211ENST00000487558 ALG2Q9H553 416 aa10.41□□□□□ -0.74
CUL3-211ENST00000487558 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.74
CUL3-211ENST00000487558 ADAMTS19Q8TE59 1207 aa10.4□□□□□ -0.74
CUL3-211ENST00000487558 SLC35F4A4IF30 521 aa10.39□□□□□ -0.75
CUL3-211ENST00000487558 CTSOP43234 321 aaPredicted RBP10.39□□□□□ -0.75
CUL3-211ENST00000487558 SEMA3FQ13275 785 aa10.39□□□□□ -0.75
CUL3-211ENST00000487558 EIF4G2P78344 907 aaKnown RBP eCLIP10.38□□□□□ -0.75
CUL3-211ENST00000487558 RELBQ01201 579 aa10.38□□□□□ -0.75
CUL3-211ENST00000487558 NBPF20Q3BBV1 942 aa10.38□□□□□ -0.75
CUL3-211ENST00000487558 INSM2Q96T92 566 aaPredicted RBP10.38□□□□□ -0.75
CUL3-211ENST00000487558 TMPRSS4Q9NRS4 437 aa10.38□□□□□ -0.75
CUL3-211ENST00000487558 RETREG2Q8NC44 543 aa10.37□□□□□ -0.75
CUL3-211ENST00000487558 PBXIP1Q96AQ6 731 aa10.37□□□□□ -0.75
CUL3-211ENST00000487558 PPP1R12CQ9BZL4 782 aa10.37□□□□□ -0.75
CUL3-211ENST00000487558 ESPNB1AK53 854 aa10.36□□□□□ -0.75
CUL3-211ENST00000487558 LILRA1O75019 489 aa10.36□□□□□ -0.75
CUL3-211ENST00000487558 KCTD17Q8N5Z5 321 aa10.36□□□□□ -0.75
CUL3-211ENST00000487558 ZNF784Q8NCA9 323 aaPredicted RBP10.36□□□□□ -0.75
CUL3-211ENST00000487558 CNTNAP3BQ96NU0 1288 aa10.36□□□□□ -0.75
CUL3-211ENST00000487558 CNTNAP3Q9BZ76 1288 aa10.36□□□□□ -0.75
CUL3-211ENST00000487558 ERVH48-1M5A8F1 160 aa10.35□□□□□ -0.75
CUL3-211ENST00000487558 RFX1P22670 979 aa10.35□□□□□ -0.75
CUL3-211ENST00000487558 ADD1P35611 737 aaKnown RBP10.35□□□□□ -0.75
CUL3-211ENST00000487558 KDF1Q8NAX2 398 aaPredicted RBP10.35□□□□□ -0.75
CUL3-211ENST00000487558 RNF217Q8TC41 542 aa10.35□□□□□ -0.75
CUL3-211ENST00000487558 COL25A1Q9BXS0 654 aaPredicted RBP10.35□□□□□ -0.75
CUL3-211ENST00000487558 ZNF395Q9H8N7 513 aaPredicted RBP10.35□□□□□ -0.75
CUL3-211ENST00000487558 ITGA6P23229 1130 aa10.34□□□□□ -0.75
CUL3-211ENST00000487558 GSK3AP49840 483 aa10.34□□□□□ -0.75
CUL3-211ENST00000487558 NR1H3Q13133 447 aa10.34□□□□□ -0.75
CUL3-211ENST00000487558 CFAP70Q5T0N1 1121 aa10.34□□□□□ -0.75
CUL3-211ENST00000487558 DZIP3Q86Y13 1208 aaKnown RBP10.34□□□□□ -0.75
CUL3-211ENST00000487558 PALM3A6NDB9 673 aaPredicted RBP10.33□□□□□ -0.76
CUL3-211ENST00000487558 ADH1AP07327 375 aa10.33□□□□□ -0.76
CUL3-211ENST00000487558 KCNMA1Q12791 1236 aa10.33□□□□□ -0.76
CUL3-211ENST00000487558 RNFT1Q5M7Z0 435 aa10.33□□□□□ -0.76
CUL3-211ENST00000487558 POLMQ9NP87 494 aaPredicted RBP10.33□□□□□ -0.76
CUL3-211ENST00000487558 SENP3-EIF4A1A0A087X0R7 540 aa10.32□□□□□ -0.76
CUL3-211ENST00000487558 ZBBXA8MT70 800 aa10.32□□□□□ -0.76
CUL3-211ENST00000487558 VWA5B2Q8N398 1253 aa10.32□□□□□ -0.76
CUL3-211ENST00000487558 TFIP11Q9UBB9 837 aaKnown RBP10.32□□□□□ -0.76
CUL3-211ENST00000487558 LMOD1P29536 600 aaPredicted RBP10.31□□□□□ -0.76
CUL3-211ENST00000487558 PTGIRP43119 386 aa10.31□□□□□ -0.76
CUL3-211ENST00000487558 RAB15P59190 212 aa10.31□□□□□ -0.76
CUL3-211ENST00000487558 FOXD4L5Q5VV16 416 aaPredicted RBP10.31□□□□□ -0.76
CUL3-211ENST00000487558 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.3□□□□□ -0.76
CUL3-211ENST00000487558 CSB-PGBD3P0DP91 1061 aa10.29□□□□□ -0.76
CUL3-211ENST00000487558 SV2AQ7L0J3 742 aa10.29□□□□□ -0.76
CUL3-211ENST00000487558 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
CUL3-211ENST00000487558 FBXO45P0C2W1 286 aa10.28□□□□□ -0.76
CUL3-211ENST00000487558 SLURP2P0DP57 97 aa10.28□□□□□ -0.76
CUL3-211ENST00000487558 SRPK2P78362 688 aaKnown RBP10.28□□□□□ -0.76
CUL3-211ENST00000487558 AEBP1Q8IUX7 1158 aa10.28□□□□□ -0.76
CUL3-211ENST00000487558 ZNF592Q92610 1267 aa10.28□□□□□ -0.76
CUL3-211ENST00000487558 UCN2Q96RP3 112 aa10.28□□□□□ -0.76
CUL3-211ENST00000487558 ADAMTS8Q9UP79 889 aa10.28□□□□□ -0.76
CUL3-211ENST00000487558 ZNF385CQ66K41 422 aaPredicted RBP10.27□□□□□ -0.77
CUL3-211ENST00000487558 CDC14CA4D256 554 aa10.26□□□□□ -0.77
CUL3-211ENST00000487558 ATP9BO43861 1147 aa10.25□□□□□ -0.77
CUL3-211ENST00000487558 MCCD1P59942 119 aaPredicted RBP10.25□□□□□ -0.77
CUL3-211ENST00000487558 TBC1D9Q6ZT07 1266 aa10.25□□□□□ -0.77
CUL3-211ENST00000487558 WHAMMQ8TF30 809 aa10.25□□□□□ -0.77
CUL3-211ENST00000487558 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
CUL3-211ENST00000487558 USTQ9Y2C2 406 aa10.25□□□□□ -0.77
CUL3-211ENST00000487558 MAFBQ9Y5Q3 323 aaPredicted RBP10.25□□□□□ -0.77
CUL3-211ENST00000487558 RNF144AP50876 292 aaPredicted RBP10.24□□□□□ -0.77
CUL3-211ENST00000487558 LYSMD3Q7Z3D4 306 aa10.24□□□□□ -0.77
CUL3-211ENST00000487558 GIGYF1O75420 1035 aaPredicted RBP10.23□□□□□ -0.77
CUL3-211ENST00000487558 ARHGEF15O94989 841 aa10.23□□□□□ -0.77
CUL3-211ENST00000487558 NFATC2IPQ8NCF5 419 aa10.23□□□□□ -0.77
CUL3-211ENST00000487558 CUEDC1Q9NWM3 386 aaPredicted RBP10.23□□□□□ -0.77
CUL3-211ENST00000487558 PATL2C9JE40 543 aaKnown RBP10.22□□□□□ -0.77
CUL3-211ENST00000487558 RASSF7Q02833 373 aa10.22□□□□□ -0.77
CUL3-211ENST00000487558 VRTNQ9H8Y1 702 aa10.22□□□□□ -0.77
CUL3-211ENST00000487558 CCDC9Q9Y3X0 531 aaKnown RBP10.22□□□□□ -0.77
CUL3-211ENST00000487558 ATG7O95352 703 aa10.21□□□□□ -0.77
CUL3-211ENST00000487558 TMEM151AQ8N4L1 468 aa10.21□□□□□ -0.77
CUL3-211ENST00000487558 SVOPQ8N4V2 548 aa10.21□□□□□ -0.77
CUL3-211ENST00000487558 TRIM52Q96A61 297 aa10.21□□□□□ -0.77
CUL3-211ENST00000487558 PCDHB9Q9Y5E1 797 aa10.21□□□□□ -0.77
CUL3-211ENST00000487558 CDCA8Q53HL2 280 aa10.2□□□□□ -0.78
CUL3-211ENST00000487558 CCDC125Q86Z20 511 aa10.2□□□□□ -0.78
CUL3-211ENST00000487558 ATP5J2-PTCD1G3V325 749 aa10.19□□□□□ -0.78
CUL3-211ENST00000487558 GDF11O95390 407 aa10.19□□□□□ -0.78
CUL3-211ENST00000487558 GAS6Q14393 721 aa10.19□□□□□ -0.78
CUL3-211ENST00000487558 PRICKLE2Q7Z3G6 844 aa10.19□□□□□ -0.78
CUL3-211ENST00000487558 RNF225M0QZC1 329 aaPredicted RBP10.18□□□□□ -0.78
CUL3-211ENST00000487558 SKIP12755 728 aa10.18□□□□□ -0.78
CUL3-211ENST00000487558 ERVK-9P63128 1117 aa10.18□□□□□ -0.78
CUL3-211ENST00000487558 CEP126Q9P2H0 1117 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms