RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 CTSOP43234 321 aaPredicted RBP9.8□□□□□ -0.84
GCFC2-209ENST00000486016 GIGYF1O75420 1035 aaPredicted RBP9.79□□□□□ -0.84
GCFC2-209ENST00000486016 ADH1AP07327 375 aa9.79□□□□□ -0.84
GCFC2-209ENST00000486016 RELBQ01201 579 aa9.79□□□□□ -0.84
GCFC2-209ENST00000486016 SCARF2Q96GP6 870 aaPredicted RBP9.79□□□□□ -0.84
GCFC2-209ENST00000486016 RAB15P59190 212 aa9.78□□□□□ -0.84
GCFC2-209ENST00000486016 XP32Q5T750 250 aa9.78□□□□□ -0.84
GCFC2-209ENST00000486016 INSM2Q96T92 566 aaPredicted RBP9.78□□□□□ -0.84
GCFC2-209ENST00000486016 SNRKQ9NRH2 765 aa9.78□□□□□ -0.84
GCFC2-209ENST00000486016 ITGA6P23229 1130 aa9.77□□□□□ -0.85
GCFC2-209ENST00000486016 SV2AQ7L0J3 742 aa9.77□□□□□ -0.85
GCFC2-209ENST00000486016 PTGIRP43119 386 aa9.76□□□□□ -0.85
GCFC2-209ENST00000486016 RNF217Q8TC41 542 aa9.76□□□□□ -0.85
GCFC2-209ENST00000486016 ZNF395Q9H8N7 513 aaPredicted RBP9.76□□□□□ -0.85
GCFC2-209ENST00000486016 NR1H3Q13133 447 aa9.75□□□□□ -0.85
GCFC2-209ENST00000486016 PCDHB9Q9Y5E1 797 aa9.75□□□□□ -0.85
GCFC2-209ENST00000486016 FOXD4L5Q5VV16 416 aaPredicted RBP9.74□□□□□ -0.85
GCFC2-209ENST00000486016 SENP3-EIF4A1A0A087X0R7 540 aa9.73□□□□□ -0.85
GCFC2-209ENST00000486016 ADAMTS2O95450 1211 aa9.73□□□□□ -0.85
GCFC2-209ENST00000486016 LYPD4Q6UWN0 246 aa9.73□□□□□ -0.85
GCFC2-209ENST00000486016 CYLDQ9NQC7 956 aa9.73□□□□□ -0.85
GCFC2-209ENST00000486016 CCDC125Q86Z20 511 aa9.72□□□□□ -0.85
GCFC2-209ENST00000486016 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
GCFC2-209ENST00000486016 MCCD1P59942 119 aaPredicted RBP9.71□□□□□ -0.86
GCFC2-209ENST00000486016 ERVK-9P63128 1117 aa9.71□□□□□ -0.86
GCFC2-209ENST00000486016 POLMQ9NP87 494 aaPredicted RBP9.71□□□□□ -0.86
GCFC2-209ENST00000486016 MAP3K10Q02779 954 aa9.7□□□□□ -0.86
GCFC2-209ENST00000486016 MSTNO14793 375 aa9.69□□□□□ -0.86
GCFC2-209ENST00000486016 ADAM23O75077 832 aa9.69□□□□□ -0.86
GCFC2-209ENST00000486016 SRSF11Q05519 484 aaKnown RBP9.69□□□□□ -0.86
GCFC2-209ENST00000486016 RNF144AP50876 292 aaPredicted RBP9.68□□□□□ -0.86
GCFC2-209ENST00000486016 CELA2BP08218 269 aaPredicted RBP9.67□□□□□ -0.86
GCFC2-209ENST00000486016 SCTRP47872 440 aa9.67□□□□□ -0.86
GCFC2-209ENST00000486016 PLA2G4EQ3MJ16 856 aa9.67□□□□□ -0.86
GCFC2-209ENST00000486016 RNF20Q5VTR2 975 aa9.67□□□□□ -0.86
GCFC2-209ENST00000486016 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
GCFC2-209ENST00000486016 TRAK2O60296 914 aa9.66□□□□□ -0.86
GCFC2-209ENST00000486016 CC2D2BQ6DHV5 1058 aa9.66□□□□□ -0.86
GCFC2-209ENST00000486016 ENAMQ9NRM1 1142 aa9.66□□□□□ -0.86
GCFC2-209ENST00000486016 APBB1O00213 710 aa9.65□□□□□ -0.86
GCFC2-209ENST00000486016 IRF5Q13568 498 aa9.65□□□□□ -0.86
GCFC2-209ENST00000486016 TRIM52Q96A61 297 aa9.65□□□□□ -0.86
GCFC2-209ENST00000486016 SPOCK3Q9BQ16 436 aa9.65□□□□□ -0.86
GCFC2-209ENST00000486016 OSBPL3Q9H4L5 887 aa9.65□□□□□ -0.86
GCFC2-209ENST00000486016 TBC1D2BQ9UPU7 963 aa9.65□□□□□ -0.86
GCFC2-209ENST00000486016 CNTNAP5Q8WYK1 1306 aa9.64□□□□□ -0.87
GCFC2-209ENST00000486016 A0A1W2PRU2 124 aa9.64□□□□□ -0.87
GCFC2-209ENST00000486016 GPC1P35052 558 aa9.64□□□□□ -0.87
GCFC2-209ENST00000486016 LYSMD3Q7Z3D4 306 aa9.64□□□□□ -0.87
GCFC2-209ENST00000486016 ZNF592Q92610 1267 aa9.64□□□□□ -0.87
GCFC2-209ENST00000486016 DCAF5Q96JK2 942 aa9.64□□□□□ -0.87
GCFC2-209ENST00000486016 CUEDC1Q9NWM3 386 aaPredicted RBP9.64□□□□□ -0.87
GCFC2-209ENST00000486016 CEP126Q9P2H0 1117 aa9.64□□□□□ -0.87
GCFC2-209ENST00000486016 ZNF330Q9Y3S2 320 aaPredicted RBP9.64□□□□□ -0.87
GCFC2-209ENST00000486016 PHF20L1A8MW92 1017 aa9.63□□□□□ -0.87
GCFC2-209ENST00000486016 PCDHB11Q9Y5F2 797 aa9.63□□□□□ -0.87
GCFC2-209ENST00000486016 GAS6Q14393 721 aa9.62□□□□□ -0.87
GCFC2-209ENST00000486016 PRICKLE2Q7Z3G6 844 aa9.62□□□□□ -0.87
GCFC2-209ENST00000486016 CCDC85AQ96PX6 553 aaPredicted RBP9.62□□□□□ -0.87
GCFC2-209ENST00000486016 ITGB2P05107 769 aa9.61□□□□□ -0.87
GCFC2-209ENST00000486016 CLN3Q13286 438 aa9.61□□□□□ -0.87
GCFC2-209ENST00000486016 PHTF2Q8N3S3 785 aa9.61□□□□□ -0.87
GCFC2-209ENST00000486016 GRIP2Q9C0E4 1043 aa9.61□□□□□ -0.87
GCFC2-209ENST00000486016 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
GCFC2-209ENST00000486016 MEN1O00255 615 aa9.59□□□□□ -0.87
GCFC2-209ENST00000486016 RHOQP17081 205 aa9.59□□□□□ -0.87
GCFC2-209ENST00000486016 CYP2U1Q7Z449 544 aa9.59□□□□□ -0.87
GCFC2-209ENST00000486016 GALNT6Q8NCL4 622 aa9.59□□□□□ -0.87
GCFC2-209ENST00000486016 CDCA7Q9BWT1 371 aaPredicted RBP9.59□□□□□ -0.87
GCFC2-209ENST00000486016 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
GCFC2-209ENST00000486016 BEND7Q8N7W2 519 aaPredicted RBP9.58□□□□□ -0.88
GCFC2-209ENST00000486016 CHIC2Q9UKJ5 165 aa9.58□□□□□ -0.88
GCFC2-209ENST00000486016 HRH3Q9Y5N1 445 aa9.58□□□□□ -0.88
GCFC2-209ENST00000486016 PROCP04070 461 aa9.57□□□□□ -0.88
GCFC2-209ENST00000486016 NEDD1Q8NHV4 660 aa9.57□□□□□ -0.88
GCFC2-209ENST00000486016 MBIPQ9NS73 344 aa9.57□□□□□ -0.88
GCFC2-209ENST00000486016 SPATA31C2B4DYI2 1134 aa9.56□□□□□ -0.88
GCFC2-209ENST00000486016 PODNQ7Z5L7 613 aa9.56□□□□□ -0.88
GCFC2-209ENST00000486016 GMCL1Q96IK5 515 aa9.56□□□□□ -0.88
GCFC2-209ENST00000486016 ARHGEF10LQ9HCE6 1279 aa9.56□□□□□ -0.88
GCFC2-209ENST00000486016 IL2RAP01589 272 aa9.55□□□□□ -0.88
GCFC2-209ENST00000486016 POU4F2Q12837 409 aa9.55□□□□□ -0.88
GCFC2-209ENST00000486016 GDPD2Q9HCC8 539 aa9.55□□□□□ -0.88
GCFC2-209ENST00000486016 IGF1RP08069 1367 aa9.54□□□□□ -0.88
GCFC2-209ENST00000486016 GPR25O00155 361 aa9.54□□□□□ -0.88
GCFC2-209ENST00000486016 GNRH1P01148 92 aa9.54□□□□□ -0.88
GCFC2-209ENST00000486016 DBN1Q16643 649 aa9.54□□□□□ -0.88
GCFC2-209ENST00000486016 WDR44Q5JSH3 913 aa9.54□□□□□ -0.88
GCFC2-209ENST00000486016 NBPF10Q6P3W6 841 aaKnown RBP9.54□□□□□ -0.88
GCFC2-209ENST00000486016 TRIM22Q8IYM9 498 aa9.54□□□□□ -0.88
GCFC2-209ENST00000486016 NBPF15Q8N660 670 aa9.54□□□□□ -0.88
GCFC2-209ENST00000486016 ZNF837Q96EG3 531 aaPredicted RBP9.54□□□□□ -0.88
GCFC2-209ENST00000486016 NLRP3Q96P20 1036 aa9.54□□□□□ -0.88
GCFC2-209ENST00000486016 KRTAP4-8Q9BYQ9 185 aa9.54□□□□□ -0.88
GCFC2-209ENST00000486016 DYRK1BQ9Y463 629 aa9.54□□□□□ -0.88
GCFC2-209ENST00000486016 BCRP11274 1271 aa9.53□□□□□ -0.88
GCFC2-209ENST00000486016 EIF4G2P78344 907 aaKnown RBP eCLIP9.53□□□□□ -0.88
GCFC2-209ENST00000486016 MCM6Q14566 821 aa9.53□□□□□ -0.88
GCFC2-209ENST00000486016 ESYT1Q9BSJ8 1104 aa9.53□□□□□ -0.88
GCFC2-209ENST00000486016 RAB6BQ9NRW1 208 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms