RNA–Protein interactions for RNA: ENST00000484006.1

THUMPD3-209, Transcript of THUMP domain containing 3, humanhuman

TSL 4

Gene THUMPD3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-209ENST00000484006 CNTNAP3Q9BZ76 1288 aa9.25□□□□□ -0.93
THUMPD3-209ENST00000484006 ITGA6P23229 1130 aa9.24□□□□□ -0.93
THUMPD3-209ENST00000484006 SV2AQ7L0J3 742 aa9.24□□□□□ -0.93
THUMPD3-209ENST00000484006 RNF217Q8TC41 542 aa9.24□□□□□ -0.93
THUMPD3-209ENST00000484006 PCDHB9Q9Y5E1 797 aa9.24□□□□□ -0.93
THUMPD3-209ENST00000484006 GIGYF1O75420 1035 aaPredicted RBP9.23□□□□□ -0.93
THUMPD3-209ENST00000484006 MCCD1P59942 119 aaPredicted RBP9.23□□□□□ -0.93
THUMPD3-209ENST00000484006 VWA5B2Q8N398 1253 aa9.23□□□□□ -0.93
THUMPD3-209ENST00000484006 ZNF592Q92610 1267 aa9.23□□□□□ -0.93
THUMPD3-209ENST00000484006 GJD4Q96KN9 370 aaPredicted RBP9.23□□□□□ -0.93
THUMPD3-209ENST00000484006 COL25A1Q9BXS0 654 aaPredicted RBP9.23□□□□□ -0.93
THUMPD3-209ENST00000484006 RNF20Q5VTR2 975 aa9.22□□□□□ -0.93
THUMPD3-209ENST00000484006 LYSMD3Q7Z3D4 306 aa9.22□□□□□ -0.93
THUMPD3-209ENST00000484006 CDC14CA4D256 554 aa9.21□□□□□ -0.94
THUMPD3-209ENST00000484006 KRT76Q01546 638 aa9.21□□□□□ -0.94
THUMPD3-209ENST00000484006 KDF1Q8NAX2 398 aaPredicted RBP9.21□□□□□ -0.94
THUMPD3-209ENST00000484006 BANK1Q8NDB2 785 aa9.21□□□□□ -0.94
THUMPD3-209ENST00000484006 CYLDQ9NQC7 956 aa9.21□□□□□ -0.94
THUMPD3-209ENST00000484006 ZNF330Q9Y3S2 320 aaPredicted RBP9.21□□□□□ -0.94
THUMPD3-209ENST00000484006 ATP5J2-PTCD1G3V325 749 aa9.2□□□□□ -0.94
THUMPD3-209ENST00000484006 FBXO45P0C2W1 286 aa9.2□□□□□ -0.94
THUMPD3-209ENST00000484006 FOXD4L5Q5VV16 416 aaPredicted RBP9.2□□□□□ -0.94
THUMPD3-209ENST00000484006 CCDC88BA6NC98 1476 aa9.2□□□□□ -0.94
THUMPD3-209ENST00000484006 NESP48681 1621 aa9.2□□□□□ -0.94
THUMPD3-209ENST00000484006 RNF144AP50876 292 aaPredicted RBP9.19□□□□□ -0.94
THUMPD3-209ENST00000484006 SENP3-EIF4A1A0A087X0R7 540 aa9.18□□□□□ -0.94
THUMPD3-209ENST00000484006 BRPF1P55201 1214 aaPredicted RBP9.18□□□□□ -0.94
THUMPD3-209ENST00000484006 NR1H3Q13133 447 aa9.18□□□□□ -0.94
THUMPD3-209ENST00000484006 APBB1O00213 710 aa9.17□□□□□ -0.94
THUMPD3-209ENST00000484006 SOCS7O14512 581 aa9.17□□□□□ -0.94
THUMPD3-209ENST00000484006 PRICKLE2Q7Z3G6 844 aa9.17□□□□□ -0.94
THUMPD3-209ENST00000484006 ERCC6Q03468 1493 aa9.16□□□□□ -0.94
THUMPD3-209ENST00000484006 GPC1P35052 558 aa9.16□□□□□ -0.94
THUMPD3-209ENST00000484006 KCNMA1Q12791 1236 aa9.16□□□□□ -0.94
THUMPD3-209ENST00000484006 RNFT1Q5M7Z0 435 aa9.16□□□□□ -0.94
THUMPD3-209ENST00000484006 CC2D2BQ6DHV5 1058 aa9.16□□□□□ -0.94
THUMPD3-209ENST00000484006 ERVK-9P63128 1117 aa9.15□□□□□ -0.94
THUMPD3-209ENST00000484006 ESF1Q9H501 851 aaKnown RBP9.15□□□□□ -0.94
THUMPD3-209ENST00000484006 ADAMTS8Q9UP79 889 aa9.15□□□□□ -0.94
THUMPD3-209ENST00000484006 NDUFB9Q9Y6M9 179 aa9.15□□□□□ -0.94
THUMPD3-209ENST00000484006 A0A1W2PRU2 124 aa9.14□□□□□ -0.95
THUMPD3-209ENST00000484006 MEN1O00255 615 aa9.14□□□□□ -0.95
THUMPD3-209ENST00000484006 SLURP2P0DP57 97 aa9.14□□□□□ -0.95
THUMPD3-209ENST00000484006 SVOPQ8N4V2 548 aa9.14□□□□□ -0.95
THUMPD3-209ENST00000484006 GMCL1Q96IK5 515 aa9.14□□□□□ -0.95
THUMPD3-209ENST00000484006 CADPSQ9ULU8 1353 aa9.13□□□□□ -0.95
THUMPD3-209ENST00000484006 NLRP3Q96P20 1036 aa9.13□□□□□ -0.95
THUMPD3-209ENST00000484006 RHOQP17081 205 aa9.12□□□□□ -0.95
THUMPD3-209ENST00000484006 ZNF385CQ66K41 422 aaPredicted RBP9.12□□□□□ -0.95
THUMPD3-209ENST00000484006 CYP2U1Q7Z449 544 aa9.12□□□□□ -0.95
THUMPD3-209ENST00000484006 RNF225M0QZC1 329 aaPredicted RBP9.11□□□□□ -0.95
THUMPD3-209ENST00000484006 SLC27A3Q5K4L6 730 aa9.11□□□□□ -0.95
THUMPD3-209ENST00000484006 FOXR1Q6PIV2 292 aa9.11□□□□□ -0.95
THUMPD3-209ENST00000484006 MTMR14Q8NCE2 650 aa9.11□□□□□ -0.95
THUMPD3-209ENST00000484006 PCDHB11Q9Y5F2 797 aa9.11□□□□□ -0.95
THUMPD3-209ENST00000484006 SNRKQ9NRH2 765 aa9.1□□□□□ -0.95
THUMPD3-209ENST00000484006 DYRK1BQ9Y463 629 aa9.1□□□□□ -0.95
THUMPD3-209ENST00000484006 PDS5BQ9NTI5 1447 aa9.09□□□□□ -0.95
THUMPD3-209ENST00000484006 H7C1W4 665 aa9.09□□□□□ -0.95
THUMPD3-209ENST00000484006 SRSF11Q05519 484 aaKnown RBP9.09□□□□□ -0.95
THUMPD3-209ENST00000484006 TRIM22Q8IYM9 498 aa9.09□□□□□ -0.95
THUMPD3-209ENST00000484006 GRIP2Q9C0E4 1043 aa9.09□□□□□ -0.95
THUMPD3-209ENST00000484006 PRM3Q9NNZ6 103 aa9.09□□□□□ -0.95
THUMPD3-209ENST00000484006 CUEDC1Q9NWM3 386 aaPredicted RBP9.09□□□□□ -0.95
THUMPD3-209ENST00000484006 LAMC3Q9Y6N6 1575 aa9.08□□□□□ -0.96
THUMPD3-209ENST00000484006 ADAMTS2O95450 1211 aa9.08□□□□□ -0.96
THUMPD3-209ENST00000484006 POU4F2Q12837 409 aa9.08□□□□□ -0.96
THUMPD3-209ENST00000484006 CLN3Q13286 438 aa9.08□□□□□ -0.96
THUMPD3-209ENST00000484006 RIPOR1Q6ZS17 1223 aa9.08□□□□□ -0.96
THUMPD3-209ENST00000484006 TMEM151AQ8N4L1 468 aa9.08□□□□□ -0.96
THUMPD3-209ENST00000484006 TRAK2O60296 914 aa9.07□□□□□ -0.96
THUMPD3-209ENST00000484006 SCTRP47872 440 aa9.07□□□□□ -0.96
THUMPD3-209ENST00000484006 RASSF7Q02833 373 aa9.07□□□□□ -0.96
THUMPD3-209ENST00000484006 WDR44Q5JSH3 913 aa9.07□□□□□ -0.96
THUMPD3-209ENST00000484006 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
THUMPD3-209ENST00000484006 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
THUMPD3-209ENST00000484006 CEP126Q9P2H0 1117 aa9.07□□□□□ -0.96
THUMPD3-209ENST00000484006 GPR37L1O60883 481 aa9.06□□□□□ -0.96
THUMPD3-209ENST00000484006 ARHGEF15O94989 841 aa9.06□□□□□ -0.96
THUMPD3-209ENST00000484006 GSK3AP49840 483 aa9.06□□□□□ -0.96
THUMPD3-209ENST00000484006 MARSP56192 900 aaKnown RBP9.06□□□□□ -0.96
THUMPD3-209ENST00000484006 DBN1Q16643 649 aa9.06□□□□□ -0.96
THUMPD3-209ENST00000484006 ZNF837Q96EG3 531 aaPredicted RBP9.06□□□□□ -0.96
THUMPD3-209ENST00000484006 GAS2L1Q99501 681 aaPredicted RBP9.06□□□□□ -0.96
THUMPD3-209ENST00000484006 CFTRP13569 1480 aa9.06□□□□□ -0.96
THUMPD3-209ENST00000484006 FANCD2Q9BXW9 1451 aa9.05□□□□□ -0.96
THUMPD3-209ENST00000484006 SPATA31C2B4DYI2 1134 aa9.05□□□□□ -0.96
THUMPD3-209ENST00000484006 GDF11O95390 407 aa9.05□□□□□ -0.96
THUMPD3-209ENST00000484006 MYCP01106 439 aaPredicted RBP9.05□□□□□ -0.96
THUMPD3-209ENST00000484006 GNRH1P01148 92 aa9.05□□□□□ -0.96
THUMPD3-209ENST00000484006 MAP3K10Q02779 954 aa9.05□□□□□ -0.96
THUMPD3-209ENST00000484006 NBPF10Q6P3W6 841 aaKnown RBP9.05□□□□□ -0.96
THUMPD3-209ENST00000484006 NBPF15Q8N660 670 aa9.05□□□□□ -0.96
THUMPD3-209ENST00000484006 ARHGEF10LQ9HCE6 1279 aa9.05□□□□□ -0.96
THUMPD3-209ENST00000484006 ENAMQ9NRM1 1142 aa9.05□□□□□ -0.96
THUMPD3-209ENST00000484006 GAS6Q14393 721 aa9.04□□□□□ -0.96
THUMPD3-209ENST00000484006 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
THUMPD3-209ENST00000484006 LYPD4Q6UWN0 246 aa9.04□□□□□ -0.96
THUMPD3-209ENST00000484006 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
THUMPD3-209ENST00000484006 CEP164Q9UPV0 1460 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms