RNA–Protein interactions for RNA: ENST00000483954.1

ATXN1-207, Transcript of ataxin 1, humanhuman

TSL 3

Gene ATXN1, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-207ENST00000483954 TOPBP1Q92547 1522 aa7.33□□□□□ -1.24
ATXN1-207ENST00000483954 PALM3A6NDB9 673 aaPredicted RBP7.33□□□□□ -1.24
ATXN1-207ENST00000483954 ATP9BO43861 1147 aa7.33□□□□□ -1.24
ATXN1-207ENST00000483954 RANGAP1P46060 587 aaPredicted RBP7.33□□□□□ -1.24
ATXN1-207ENST00000483954 SLFNL1Q499Z3 407 aa7.33□□□□□ -1.24
ATXN1-207ENST00000483954 RNF20Q5VTR2 975 aa7.33□□□□□ -1.24
ATXN1-207ENST00000483954 TRAF7Q6Q0C0 670 aa7.33□□□□□ -1.24
ATXN1-207ENST00000483954 ARID3AQ99856 593 aa7.33□□□□□ -1.24
ATXN1-207ENST00000483954 TOR4AQ9NXH8 423 aa7.33□□□□□ -1.24
ATXN1-207ENST00000483954 FHAD1B1AJZ9 1412 aa7.33□□□□□ -1.24
ATXN1-207ENST00000483954 SETD5Q9C0A6 1442 aa7.33□□□□□ -1.24
ATXN1-207ENST00000483954 FGD5Q6ZNL6 1462 aa7.32□□□□□ -1.24
ATXN1-207ENST00000483954 PRXQ9BXM0 1461 aa7.32□□□□□ -1.24
ATXN1-207ENST00000483954 LZTS3O60299 673 aaPredicted RBP7.32□□□□□ -1.24
ATXN1-207ENST00000483954 CFAP70Q5T0N1 1121 aa7.32□□□□□ -1.24
ATXN1-207ENST00000483954 TBC1D9Q6ZT07 1266 aa7.32□□□□□ -1.24
ATXN1-207ENST00000483954 MRGPRX2Q96LB1 330 aa7.32□□□□□ -1.24
ATXN1-207ENST00000483954 KCTD15Q96SI1 283 aaPredicted RBP7.32□□□□□ -1.24
ATXN1-207ENST00000483954 TFIP11Q9UBB9 837 aaKnown RBP7.32□□□□□ -1.24
ATXN1-207ENST00000483954 FANCIQ9NVI1 1328 aa7.31□□□□□ -1.24
ATXN1-207ENST00000483954 PIK3CDO00329 1044 aa7.31□□□□□ -1.24
ATXN1-207ENST00000483954 GIGYF1O75420 1035 aaPredicted RBP7.31□□□□□ -1.24
ATXN1-207ENST00000483954 DGAT1O75907 488 aa7.31□□□□□ -1.24
ATXN1-207ENST00000483954 MAP7D1Q3KQU3 841 aa7.31□□□□□ -1.24
ATXN1-207ENST00000483954 VASH1Q7L8A9 365 aaPredicted RBP7.31□□□□□ -1.24
ATXN1-207ENST00000483954 RNF135Q8IUD6 432 aa7.31□□□□□ -1.24
ATXN1-207ENST00000483954 PLEKHM2Q8IWE5 1019 aa7.31□□□□□ -1.24
ATXN1-207ENST00000483954 CYP4X1Q8N118 509 aa7.31□□□□□ -1.24
ATXN1-207ENST00000483954 MAFBQ9Y5Q3 323 aaPredicted RBP7.31□□□□□ -1.24
ATXN1-207ENST00000483954 ARAP1Q96P48 1450 aa7.3□□□□□ -1.24
ATXN1-207ENST00000483954 FAM187AA6NFU0 413 aa7.3□□□□□ -1.24
ATXN1-207ENST00000483954 PPP1R15AO75807 674 aaPredicted RBP7.3□□□□□ -1.24
ATXN1-207ENST00000483954 GRM5P41594 1212 aa7.3□□□□□ -1.24
ATXN1-207ENST00000483954 PKDCCQ504Y2 493 aa7.3□□□□□ -1.24
ATXN1-207ENST00000483954 RBM19Q9Y4C8 960 aaKnown RBP7.3□□□□□ -1.24
ATXN1-207ENST00000483954 TONSLQ96HA7 1378 aa7.3□□□□□ -1.24
ATXN1-207ENST00000483954 RAB3GAP2Q9H2M9 1393 aa7.3□□□□□ -1.24
ATXN1-207ENST00000483954 POLA1P09884 1462 aaPredicted RBP7.3□□□□□ -1.24
ATXN1-207ENST00000483954 THOC2Q8NI27 1593 aaKnown RBP7.29□□□□□ -1.24
ATXN1-207ENST00000483954 ADH1CP00326 375 aa7.29□□□□□ -1.24
ATXN1-207ENST00000483954 SKIP12755 728 aa7.29□□□□□ -1.24
ATXN1-207ENST00000483954 SRPK2P78362 688 aaKnown RBP7.29□□□□□ -1.24
ATXN1-207ENST00000483954 NR5A1Q13285 461 aa7.29□□□□□ -1.24
ATXN1-207ENST00000483954 PLPP7Q8NBV4 271 aa7.29□□□□□ -1.24
ATXN1-207ENST00000483954 ARXQ96QS3 562 aa7.29□□□□□ -1.24
ATXN1-207ENST00000483954 MRC2Q9UBG0 1479 aa7.29□□□□□ -1.24
ATXN1-207ENST00000483954 WDR97A6NE52 1622 aa7.28□□□□□ -1.24
ATXN1-207ENST00000483954 USP17L5A8MUK1 530 aa7.28□□□□□ -1.24
ATXN1-207ENST00000483954 LMOD1P29536 600 aaPredicted RBP7.28□□□□□ -1.24
ATXN1-207ENST00000483954 DDX10Q13206 875 aaKnown RBP7.28□□□□□ -1.24
ATXN1-207ENST00000483954 INTS6LQ5JSJ4 861 aaKnown RBP7.28□□□□□ -1.24
ATXN1-207ENST00000483954 SNIP1Q8TAD8 396 aaKnown RBP7.28□□□□□ -1.24
ATXN1-207ENST00000483954 TLL2Q9Y6L7 1015 aa7.28□□□□□ -1.24
ATXN1-207ENST00000483954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.28□□□□□ -1.243e-8■■□□□ 14
ATXN1-207ENST00000483954 ERCC6Q03468 1493 aa7.28□□□□□ -1.24
ATXN1-207ENST00000483954 RAD54L2Q9Y4B4 1467 aa7.28□□□□□ -1.24
ATXN1-207ENST00000483954 WDR62O43379 1518 aa7.27□□□□□ -1.25
ATXN1-207ENST00000483954 TTC24A2A3L6 582 aaPredicted RBP7.27□□□□□ -1.25
ATXN1-207ENST00000483954 USP17L3A6NCW0 530 aa7.27□□□□□ -1.25
ATXN1-207ENST00000483954 USP17L4A6NCW7 530 aa7.27□□□□□ -1.25
ATXN1-207ENST00000483954 ITGAEP38570 1179 aa7.27□□□□□ -1.25
ATXN1-207ENST00000483954 ARID5BQ14865 1188 aa7.27□□□□□ -1.25
ATXN1-207ENST00000483954 USP17L2Q6R6M4 530 aa7.27□□□□□ -1.25
ATXN1-207ENST00000483954 USP17L1Q7RTZ2 530 aa7.27□□□□□ -1.25
ATXN1-207ENST00000483954 TRIM52Q96A61 297 aa7.27□□□□□ -1.25
ATXN1-207ENST00000483954 PBXIP1Q96AQ6 731 aa7.27□□□□□ -1.25
ATXN1-207ENST00000483954 CCDC85AQ96PX6 553 aaPredicted RBP7.27□□□□□ -1.25
ATXN1-207ENST00000483954 TIAM1Q13009 1591 aa7.26□□□□□ -1.25
ATXN1-207ENST00000483954 J3QL48 77 aa7.26□□□□□ -1.25
ATXN1-207ENST00000483954 SMPD1P17405 629 aa7.26□□□□□ -1.25
ATXN1-207ENST00000483954 DHX9Q08211 1270 aaKnown RBP7.26□□□□□ -1.25
ATXN1-207ENST00000483954 TSGA10IPQ3SY00 556 aa7.26□□□□□ -1.25
ATXN1-207ENST00000483954 DOLKQ9UPQ8 538 aa7.26□□□□□ -1.25
ATXN1-207ENST00000483954 FSHRP23945 695 aa7.25□□□□□ -1.25
ATXN1-207ENST00000483954 FAM50AQ14320 339 aaKnown RBP7.25□□□□□ -1.25
ATXN1-207ENST00000483954 KANK4Q5T7N3 995 aaPredicted RBP7.25□□□□□ -1.25
ATXN1-207ENST00000483954 ARHGAP35Q9NRY4 1499 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 TARBP1Q13395 1621 aaKnown RBP7.24□□□□□ -1.25
ATXN1-207ENST00000483954 ABCA10Q8WWZ4 1543 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 ERVH48-1M5A8F1 160 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 ALDH1A1P00352 501 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 AVPP01185 164 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 RFX1P22670 979 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 NCOA4Q13772 614 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 EML3Q32P44 896 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 CCDC116Q8IYX3 515 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 SIRT1Q96EB6 747 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 VRTNQ9H8Y1 702 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 PPP4R2Q9NY27 417 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 PCDHB11Q9Y5F2 797 aa7.24□□□□□ -1.25
ATXN1-207ENST00000483954 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.23□□□□□ -1.25
ATXN1-207ENST00000483954 ATP5J2-PTCD1G3V325 749 aa7.23□□□□□ -1.25
ATXN1-207ENST00000483954 USP4Q13107 963 aa7.23□□□□□ -1.25
ATXN1-207ENST00000483954 DEPDC4Q8N2C3 294 aa7.23□□□□□ -1.25
ATXN1-207ENST00000483954 CDCA7Q9BWT1 371 aaPredicted RBP7.23□□□□□ -1.25
ATXN1-207ENST00000483954 AAASQ9NRG9 546 aa7.23□□□□□ -1.25
ATXN1-207ENST00000483954 LRRC9Q6ZRR7 1453 aa7.23□□□□□ -1.25
ATXN1-207ENST00000483954 ABCA5Q8WWZ7 1642 aa7.23□□□□□ -1.25
ATXN1-207ENST00000483954 ST8SIA5O15466 376 aa7.22□□□□□ -1.25
ATXN1-207ENST00000483954 ATG7O95352 703 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms