RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 JAZF1Q86VZ6 243 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 ZBED2Q9BTP6 218 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 MRS2Q9HD23 443 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 COL4A3BPQ9Y5P4 624 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 ITGAEP38570 1179 aa10.97□□□□□ -0.65
LSM5-210ENST00000480956 FANCCQ00597 558 aa10.97□□□□□ -0.65
LSM5-210ENST00000480956 XPCQ01831 940 aaPredicted RBP10.97□□□□□ -0.65
LSM5-210ENST00000480956 NR1H3Q13133 447 aa10.97□□□□□ -0.65
LSM5-210ENST00000480956 NR6A1Q15406 480 aa10.97□□□□□ -0.65
LSM5-210ENST00000480956 PROX2Q3B8N5 592 aa10.97□□□□□ -0.65
LSM5-210ENST00000480956 APBB1IPQ7Z5R6 666 aaPredicted RBP10.97□□□□□ -0.65
LSM5-210ENST00000480956 DPYDQ12882 1025 aa10.96□□□□□ -0.65
LSM5-210ENST00000480956 PPP1R18Q6NYC8 613 aa10.96□□□□□ -0.65
LSM5-210ENST00000480956 DMGDHQ9UI17 866 aaKnown RBP10.96□□□□□ -0.65
LSM5-210ENST00000480956 EIF3JO75822 258 aaKnown RBP10.95□□□□□ -0.66
LSM5-210ENST00000480956 LSM11P83369 360 aaKnown RBP eCLIP10.95□□□□□ -0.66
LSM5-210ENST00000480956 MTMR2Q13614 643 aa10.95□□□□□ -0.66
LSM5-210ENST00000480956 RALBP1Q15311 655 aa10.95□□□□□ -0.66
LSM5-210ENST00000480956 TAS1R3Q7RTX0 852 aa10.95□□□□□ -0.66
LSM5-210ENST00000480956 PRMT3O60678 531 aa10.95□□□□□ -0.66
LSM5-210ENST00000480956 SPTY2D1Q68D10 685 aaPredicted RBP10.95□□□□□ -0.66
LSM5-210ENST00000480956 A0A0U1RQG5 324 aaPredicted RBP10.94□□□□□ -0.66
LSM5-210ENST00000480956 TNNI2P48788 182 aa10.94□□□□□ -0.66
LSM5-210ENST00000480956 ARHGAP4P98171 946 aa10.94□□□□□ -0.66
LSM5-210ENST00000480956 NCOA4Q13772 614 aa10.94□□□□□ -0.66
LSM5-210ENST00000480956 FAM174AQ8TBP5 190 aa10.94□□□□□ -0.66
LSM5-210ENST00000480956 TSKSQ9UJT2 592 aa10.94□□□□□ -0.66
LSM5-210ENST00000480956 MAFGO15525 162 aa10.93□□□□□ -0.66
LSM5-210ENST00000480956 HOXA2O43364 376 aa10.93□□□□□ -0.66
LSM5-210ENST00000480956 USP46P62068 366 aa10.93□□□□□ -0.66
LSM5-210ENST00000480956 ARID5AQ03989 594 aa10.93□□□□□ -0.66
LSM5-210ENST00000480956 BMS1Q14692 1282 aaKnown RBP10.93□□□□□ -0.66
LSM5-210ENST00000480956 ECM1Q16610 540 aa10.93□□□□□ -0.66
LSM5-210ENST00000480956 PCDHGC3Q9UN70 934 aa10.93□□□□□ -0.66
LSM5-210ENST00000480956 ZNF76P36508 570 aa10.92□□□□□ -0.66
LSM5-210ENST00000480956 PMM1Q92871 262 aa10.92□□□□□ -0.66
LSM5-210ENST00000480956 FAM161BQ96MY7 647 aa10.92□□□□□ -0.66
LSM5-210ENST00000480956 UBA5Q9GZZ9 404 aa10.92□□□□□ -0.66
LSM5-210ENST00000480956 PCDH12Q9NPG4 1184 aa10.92□□□□□ -0.66
LSM5-210ENST00000480956 CXXC1Q9P0U4 656 aaPredicted RBP10.92□□□□□ -0.66
LSM5-210ENST00000480956 MRPL42Q9Y6G3 142 aaKnown RBP10.92□□□□□ -0.66
LSM5-210ENST00000480956 U2SURPO15042 1029 aaKnown RBP10.92□□□□□ -0.66
LSM5-210ENST00000480956 FILIP1Q7Z7B0 1213 aa10.92□□□□□ -0.66
LSM5-210ENST00000480956 VPS9D1Q9Y2B5 631 aa10.92□□□□□ -0.66
LSM5-210ENST00000480956 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.92□□□□□ -0.66
LSM5-210ENST00000480956 CFAP99D6REC4 459 aa10.91□□□□□ -0.66
LSM5-210ENST00000480956 FGD1P98174 961 aa10.91□□□□□ -0.66
LSM5-210ENST00000480956 FKBP4Q02790 459 aaKnown RBP eCLIP10.91□□□□□ -0.66
LSM5-210ENST00000480956 PLEKHG6Q3KR16 790 aa10.91□□□□□ -0.66
LSM5-210ENST00000480956 CCAR1Q8IX12 1150 aaKnown RBP10.91□□□□□ -0.66
LSM5-210ENST00000480956 GTF3C2Q8WUA4 911 aaPredicted RBP10.91□□□□□ -0.66
LSM5-210ENST00000480956 HRO43593 1189 aa10.9□□□□□ -0.66
LSM5-210ENST00000480956 CREB3O43889 395 aa10.9□□□□□ -0.66
LSM5-210ENST00000480956 FMNL1O95466 1100 aaPredicted RBP10.9□□□□□ -0.66
LSM5-210ENST00000480956 SF3B2Q13435 895 aaKnown RBP10.9□□□□□ -0.66
LSM5-210ENST00000480956 CDCA7LQ96GN5 454 aa10.9□□□□□ -0.66
LSM5-210ENST00000480956 SLC4A5Q9BY07 1137 aa10.9□□□□□ -0.66
LSM5-210ENST00000480956 IRF2BPLQ9H1B7 796 aa10.9□□□□□ -0.66
LSM5-210ENST00000480956 IFT57Q9NWB7 429 aa10.9□□□□□ -0.66
LSM5-210ENST00000480956 GABBR1Q9UBS5 961 aa10.9□□□□□ -0.66
LSM5-210ENST00000480956 BHMG1C9JSJ3 638 aaPredicted RBP10.89□□□□□ -0.67
LSM5-210ENST00000480956 SORBS3O60504 671 aa10.89□□□□□ -0.67
LSM5-210ENST00000480956 PRSS12P56730 875 aa10.89□□□□□ -0.67
LSM5-210ENST00000480956 OGFOD1Q8N543 542 aa10.89□□□□□ -0.67
LSM5-210ENST00000480956 RDH13Q8NBN7 331 aa10.89□□□□□ -0.67
LSM5-210ENST00000480956 ZNF594Q96JF6 807 aaPredicted RBP10.89□□□□□ -0.67
LSM5-210ENST00000480956 SPOCK3Q9BQ16 436 aa10.89□□□□□ -0.67
LSM5-210ENST00000480956 PARP2Q9UGN5 583 aa10.89□□□□□ -0.67
LSM5-210ENST00000480956 FBXO45P0C2W1 286 aa10.89□□□□□ -0.67
LSM5-210ENST00000480956 ADGRD1Q6QNK2 874 aa10.89□□□□□ -0.67
LSM5-210ENST00000480956 ANKRD13DQ6ZTN6 518 aa10.89□□□□□ -0.67
LSM5-210ENST00000480956 NFE2L2Q16236 605 aa10.88□□□□□ -0.67
LSM5-210ENST00000480956 OCLNQ16625 522 aa10.88□□□□□ -0.67
LSM5-210ENST00000480956 CCDC146Q8IYE0 955 aa10.88□□□□□ -0.67
LSM5-210ENST00000480956 PRIMPOLQ96LW4 560 aa10.88□□□□□ -0.67
LSM5-210ENST00000480956 TERF2IPQ9NYB0 399 aa10.88□□□□□ -0.67
LSM5-210ENST00000480956 VTI1BQ9UEU0 232 aa10.88□□□□□ -0.67
LSM5-210ENST00000480956 INPP5FQ9Y2H2 1132 aa10.88□□□□□ -0.67
LSM5-210ENST00000480956 TRIM6-TRIM34B2RNG4 842 aa10.87□□□□□ -0.67
LSM5-210ENST00000480956 STK10O94804 968 aaKnown RBP10.87□□□□□ -0.67
LSM5-210ENST00000480956 TMC4Q7Z404 712 aa10.87□□□□□ -0.67
LSM5-210ENST00000480956 G3BP2Q9UN86 482 aaKnown RBP10.87□□□□□ -0.67
LSM5-210ENST00000480956 DNMT3AQ9Y6K1 912 aaPredicted RBP10.87□□□□□ -0.67
LSM5-210ENST00000480956 ZBBXA8MT70 800 aa10.87□□□□□ -0.67
LSM5-210ENST00000480956 TK2O00142 265 aa10.87□□□□□ -0.67
LSM5-210ENST00000480956 S100BP04271 92 aaPredicted RBP10.87□□□□□ -0.67
LSM5-210ENST00000480956 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
LSM5-210ENST00000480956 PDE3BQ13370 1112 aa10.87□□□□□ -0.67
LSM5-210ENST00000480956 TMC7Q7Z402 723 aa10.87□□□□□ -0.67
LSM5-210ENST00000480956 MRFAP1L1Q96HT8 127 aa10.87□□□□□ -0.67
LSM5-210ENST00000480956 PCDH10Q9P2E7 1040 aa10.86□□□□□ -0.67
LSM5-210ENST00000480956 PRPF40AO75400 957 aaKnown RBP10.85□□□□□ -0.67
LSM5-210ENST00000480956 LDHBP07195 334 aaKnown RBP10.85□□□□□ -0.67
LSM5-210ENST00000480956 MTMR3Q13615 1198 aa10.85□□□□□ -0.67
LSM5-210ENST00000480956 FAM50AQ14320 339 aaKnown RBP10.85□□□□□ -0.67
LSM5-210ENST00000480956 SLFNL1Q499Z3 407 aa10.85□□□□□ -0.67
LSM5-210ENST00000480956 EYA1Q99502 592 aa10.85□□□□□ -0.67
LSM5-210ENST00000480956 DUSP9Q99956 384 aaKnown RBP10.85□□□□□ -0.67
LSM5-210ENST00000480956 PLCD4Q9BRC7 762 aa10.85□□□□□ -0.67
LSM5-210ENST00000480956 RBCK1Q9BYM8 510 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms