RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 NR6A1Q15406 480 aa7.31□□□□□ -1.24
PTCD3-212ENST00000477520 LYSMD3Q7Z3D4 306 aa7.31□□□□□ -1.24
PTCD3-212ENST00000477520 ADAM32Q8TC27 787 aa7.31□□□□□ -1.24
PTCD3-212ENST00000477520 ZNF837Q96EG3 531 aaPredicted RBP7.31□□□□□ -1.24
PTCD3-212ENST00000477520 ERVH48-1M5A8F1 160 aa7.3□□□□□ -1.24
PTCD3-212ENST00000477520 RHOQP17081 205 aa7.3□□□□□ -1.24
PTCD3-212ENST00000477520 PRICKLE2Q7Z3G6 844 aa7.3□□□□□ -1.24
PTCD3-212ENST00000477520 ENAMQ9NRM1 1142 aa7.3□□□□□ -1.24
PTCD3-212ENST00000477520 MBIPQ9NS73 344 aa7.29□□□□□ -1.24
PTCD3-212ENST00000477520 IGF1RP08069 1367 aa7.29□□□□□ -1.24
PTCD3-212ENST00000477520 ACDQ96AP0 544 aa7.28□□□□□ -1.24
PTCD3-212ENST00000477520 ZC3H4Q9UPT8 1303 aaKnown RBP7.27□□□□□ -1.24
PTCD3-212ENST00000477520 PHF20L1A8MW92 1017 aa7.27□□□□□ -1.25
PTCD3-212ENST00000477520 PTK2Q05397 1052 aa7.27□□□□□ -1.25
PTCD3-212ENST00000477520 DBN1Q16643 649 aa7.27□□□□□ -1.25
PTCD3-212ENST00000477520 TRIM22Q8IYM9 498 aa7.27□□□□□ -1.25
PTCD3-212ENST00000477520 BEND7Q8N7W2 519 aaPredicted RBP7.27□□□□□ -1.25
PTCD3-212ENST00000477520 EPS8L1Q8TE68 723 aa7.27□□□□□ -1.25
PTCD3-212ENST00000477520 BCRP11274 1271 aa7.26□□□□□ -1.25
PTCD3-212ENST00000477520 RNF144AP50876 292 aaPredicted RBP7.26□□□□□ -1.25
PTCD3-212ENST00000477520 NBPF20Q3BBV1 942 aa7.26□□□□□ -1.25
PTCD3-212ENST00000477520 NEDD1Q8NHV4 660 aa7.26□□□□□ -1.25
PTCD3-212ENST00000477520 ESPNB1AK53 854 aa7.25□□□□□ -1.25
PTCD3-212ENST00000477520 GPSM3Q9Y4H4 160 aa7.25□□□□□ -1.25
PTCD3-212ENST00000477520 RIPOR1Q6ZS17 1223 aa7.24□□□□□ -1.25
PTCD3-212ENST00000477520 ERICH6Q7L0X2 663 aa7.24□□□□□ -1.25
PTCD3-212ENST00000477520 GTPBP3Q969Y2 492 aaKnown RBP7.24□□□□□ -1.25
PTCD3-212ENST00000477520 PCGF6Q9BYE7 350 aa7.24□□□□□ -1.25
PTCD3-212ENST00000477520 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
PTCD3-212ENST00000477520 RSPH6AQ9H0K4 717 aa7.24□□□□□ -1.25
PTCD3-212ENST00000477520 CYLDQ9NQC7 956 aa7.24□□□□□ -1.25
PTCD3-212ENST00000477520 CENPBP07199 599 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-212ENST00000477520 PODNQ7Z5L7 613 aa7.23□□□□□ -1.25
PTCD3-212ENST00000477520 GALNT6Q8NCL4 622 aa7.23□□□□□ -1.25
PTCD3-212ENST00000477520 GMCL1Q96IK5 515 aa7.23□□□□□ -1.25
PTCD3-212ENST00000477520 DZIP3Q86Y13 1208 aaKnown RBP7.22□□□□□ -1.25
PTCD3-212ENST00000477520 PROCA1Q8NCQ7 364 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-212ENST00000477520 K7ELQ4 463 aaPredicted RBP7.21□□□□□ -1.26
PTCD3-212ENST00000477520 SNRPNP63162 240 aaKnown RBP7.21□□□□□ -1.26
PTCD3-212ENST00000477520 FOXR1Q6PIV2 292 aa7.21□□□□□ -1.26
PTCD3-212ENST00000477520 HMX1Q9NP08 348 aaPredicted RBP7.21□□□□□ -1.26
PTCD3-212ENST00000477520 ACIN1Q9UKV3 1341 aaKnown RBP7.21□□□□□ -1.26
PTCD3-212ENST00000477520 KRBA1A5PL33 1030 aa7.2□□□□□ -1.26
PTCD3-212ENST00000477520 POU4F2Q12837 409 aa7.2□□□□□ -1.26
PTCD3-212ENST00000477520 TRIM26Q12899 539 aaPredicted RBP7.2□□□□□ -1.26
PTCD3-212ENST00000477520 PPP2R2DQ66LE6 453 aa7.2□□□□□ -1.26
PTCD3-212ENST00000477520 GAS2L1Q99501 681 aaPredicted RBP7.2□□□□□ -1.26
PTCD3-212ENST00000477520 SLC24A3Q9HC58 644 aa7.2□□□□□ -1.26
PTCD3-212ENST00000477520 DYRK1BQ9Y463 629 aa7.2□□□□□ -1.26
PTCD3-212ENST00000477520 ATP5J2-PTCD1G3V325 749 aa7.19□□□□□ -1.26
PTCD3-212ENST00000477520 MEN1O00255 615 aa7.19□□□□□ -1.26
PTCD3-212ENST00000477520 OIP5O43482 229 aa7.19□□□□□ -1.26
PTCD3-212ENST00000477520 MX2P20592 715 aa7.19□□□□□ -1.26
PTCD3-212ENST00000477520 BAG6P46379 1132 aa7.19□□□□□ -1.26
PTCD3-212ENST00000477520 A0A1W2PRU2 124 aa7.18□□□□□ -1.26
PTCD3-212ENST00000477520 AP1G2O75843 785 aa7.18□□□□□ -1.26
PTCD3-212ENST00000477520 GPC1P35052 558 aa7.18□□□□□ -1.26
PTCD3-212ENST00000477520 PPARGC1BQ86YN6 1023 aaKnown RBP7.18□□□□□ -1.26
PTCD3-212ENST00000477520 Q8N3U1 123 aa7.18□□□□□ -1.26
PTCD3-212ENST00000477520 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.18□□□□□ -1.26
PTCD3-212ENST00000477520 LRRC4BQ9NT99 713 aa7.18□□□□□ -1.26
PTCD3-212ENST00000477520 SHISA8B8ZZ34 492 aa7.17□□□□□ -1.26
PTCD3-212ENST00000477520 THBS1P07996 1170 aa7.17□□□□□ -1.26
PTCD3-212ENST00000477520 FURINP09958 794 aa7.17□□□□□ -1.26
PTCD3-212ENST00000477520 COL8A1P27658 744 aa7.17□□□□□ -1.26
PTCD3-212ENST00000477520 SKIV2LQ15477 1246 aaKnown RBP7.17□□□□□ -1.26
PTCD3-212ENST00000477520 TRERF1Q96PN7 1200 aa7.17□□□□□ -1.26
PTCD3-212ENST00000477520 BAZ1AQ9NRL2 1556 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-212ENST00000477520 H7C1W4 665 aa7.16□□□□□ -1.26
PTCD3-212ENST00000477520 C1orf229Q6ZS94 237 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-212ENST00000477520 SEPT12Q8IYM1 358 aa7.16□□□□□ -1.26
PTCD3-212ENST00000477520 EIF4G1Q04637 1599 aaKnown RBP7.16□□□□□ -1.26
PTCD3-212ENST00000477520 GIGYF1O75420 1035 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-212ENST00000477520 NBPF10Q6P3W6 841 aaKnown RBP7.15□□□□□ -1.26
PTCD3-212ENST00000477520 NBPF15Q8N660 670 aa7.15□□□□□ -1.26
PTCD3-212ENST00000477520 OXCT2Q9BYC2 517 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-212ENST00000477520 GRIP2Q9C0E4 1043 aa7.15□□□□□ -1.26
PTCD3-212ENST00000477520 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-212ENST00000477520 USP17L8P0C7I0 530 aa7.14□□□□□ -1.27
PTCD3-212ENST00000477520 SH3D19Q5HYK7 790 aa7.14□□□□□ -1.27
PTCD3-212ENST00000477520 SLC27A3Q5K4L6 730 aa7.14□□□□□ -1.27
PTCD3-212ENST00000477520 CECR2Q9BXF3 1484 aa7.14□□□□□ -1.27
PTCD3-212ENST00000477520 NUCKS1Q9H1E3 243 aaKnown RBP7.14□□□□□ -1.27
PTCD3-212ENST00000477520 SMARCA4P51532 1647 aa7.13□□□□□ -1.27
PTCD3-212ENST00000477520 SPATA31C2B4DYI2 1134 aa7.13□□□□□ -1.27
PTCD3-212ENST00000477520 KRTAP9-2Q9BYQ4 174 aa7.13□□□□□ -1.27
PTCD3-212ENST00000477520 NSFL1CQ9UNZ2 370 aaKnown RBP7.13□□□□□ -1.27
PTCD3-212ENST00000477520 CLSPNQ9HAW4 1339 aa7.12□□□□□ -1.27
PTCD3-212ENST00000477520 HOXB4P17483 251 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-212ENST00000477520 SCTRP47872 440 aa7.12□□□□□ -1.27
PTCD3-212ENST00000477520 ERVK-9P63128 1117 aa7.12□□□□□ -1.27
PTCD3-212ENST00000477520 KLRG1Q96E93 195 aa7.12□□□□□ -1.27
PTCD3-212ENST00000477520 TRIM34Q9BYJ4 488 aa7.12□□□□□ -1.27
PTCD3-212ENST00000477520 MKL2Q9ULH7 1088 aa7.12□□□□□ -1.27
PTCD3-212ENST00000477520 F11P03951 625 aa7.11□□□□□ -1.27
PTCD3-212ENST00000477520 MAP2K3P46734 347 aa7.11□□□□□ -1.27
PTCD3-212ENST00000477520 CLN3Q13286 438 aa7.11□□□□□ -1.27
PTCD3-212ENST00000477520 PNMA1Q8ND90 353 aa7.11□□□□□ -1.27
PTCD3-212ENST00000477520 NLRP3Q96P20 1036 aa7.11□□□□□ -1.27
PTCD3-212ENST00000477520 PSMG3-AS1Q96PY0 264 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms