RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 TRIM66O15016 1216 aa7.91□□□□□ -1.14
XRN1-211ENST00000477237 CTDSPL2Q05D32 466 aa7.91□□□□□ -1.14
XRN1-211ENST00000477237 FURINP09958 794 aa7.9□□□□□ -1.14
XRN1-211ENST00000477237 RAB15P59190 212 aa7.9□□□□□ -1.14
XRN1-211ENST00000477237 GMCL1Q96IK5 515 aa7.9□□□□□ -1.14
XRN1-211ENST00000477237 FOXR1Q6PIV2 292 aa7.89□□□□□ -1.15
XRN1-211ENST00000477237 RIPOR1Q6ZS17 1223 aa7.89□□□□□ -1.15
XRN1-211ENST00000477237 ZC3H15Q8WU90 426 aaKnown RBP7.89□□□□□ -1.15
XRN1-211ENST00000477237 GTPBP3Q969Y2 492 aaKnown RBP7.89□□□□□ -1.15
XRN1-211ENST00000477237 ERVH48-1M5A8F1 160 aa7.88□□□□□ -1.15
XRN1-211ENST00000477237 RNF144AP50876 292 aaPredicted RBP7.88□□□□□ -1.15
XRN1-211ENST00000477237 SNRPNP63162 240 aaKnown RBP7.88□□□□□ -1.15
XRN1-211ENST00000477237 ADAM32Q8TC27 787 aa7.88□□□□□ -1.15
XRN1-211ENST00000477237 LRRN4Q8WUT4 740 aa7.88□□□□□ -1.15
XRN1-211ENST00000477237 LRRC4BQ9NT99 713 aa7.88□□□□□ -1.15
XRN1-211ENST00000477237 OIP5O43482 229 aa7.86□□□□□ -1.15
XRN1-211ENST00000477237 NR6A1Q15406 480 aa7.86□□□□□ -1.15
XRN1-211ENST00000477237 ZC3H4Q9UPT8 1303 aaKnown RBP7.85□□□□□ -1.15
XRN1-211ENST00000477237 COL8A1P27658 744 aa7.85□□□□□ -1.15
XRN1-211ENST00000477237 CLK2P49760 499 aaKnown RBP7.85□□□□□ -1.15
XRN1-211ENST00000477237 PTK2Q05397 1052 aa7.85□□□□□ -1.15
XRN1-211ENST00000477237 NBPF20Q3BBV1 942 aa7.85□□□□□ -1.15
XRN1-211ENST00000477237 MX2P20592 715 aa7.84□□□□□ -1.15
XRN1-211ENST00000477237 TRERF1Q96PN7 1200 aa7.84□□□□□ -1.15
XRN1-211ENST00000477237 H7C1W4 665 aa7.83□□□□□ -1.16
XRN1-211ENST00000477237 GAS2L1Q99501 681 aaPredicted RBP7.83□□□□□ -1.16
XRN1-211ENST00000477237 CYLDQ9NQC7 956 aa7.83□□□□□ -1.16
XRN1-211ENST00000477237 DYRK1BQ9Y463 629 aa7.83□□□□□ -1.16
XRN1-211ENST00000477237 GPSM3Q9Y4H4 160 aa7.83□□□□□ -1.16
XRN1-211ENST00000477237 ESPNB1AK53 854 aa7.82□□□□□ -1.16
XRN1-211ENST00000477237 SHISA8B8ZZ34 492 aa7.82□□□□□ -1.16
XRN1-211ENST00000477237 POLR3EQ9NVU0 708 aa7.82□□□□□ -1.16
XRN1-211ENST00000477237 POU4F2Q12837 409 aa7.81□□□□□ -1.16
XRN1-211ENST00000477237 C1orf229Q6ZS94 237 aaPredicted RBP7.81□□□□□ -1.16
XRN1-211ENST00000477237 AK7Q96M32 723 aa7.81□□□□□ -1.16
XRN1-211ENST00000477237 OXCT2Q9BYC2 517 aaPredicted RBP7.81□□□□□ -1.16
XRN1-211ENST00000477237 MKL2Q9ULH7 1088 aa7.81□□□□□ -1.16
XRN1-211ENST00000477237 NSFL1CQ9UNZ2 370 aaKnown RBP7.81□□□□□ -1.16
XRN1-211ENST00000477237 GPC1P35052 558 aa7.8□□□□□ -1.16
XRN1-211ENST00000477237 KRTAP1-3Q8IUG1 177 aa7.8□□□□□ -1.16
XRN1-211ENST00000477237 MEN1O00255 615 aa7.79□□□□□ -1.16
XRN1-211ENST00000477237 FBXO31Q5XUX0 539 aaPredicted RBP7.79□□□□□ -1.16
XRN1-211ENST00000477237 ALYREFQ86V81 257 aaKnown RBP7.79□□□□□ -1.16
XRN1-211ENST00000477237 DZIP3Q86Y13 1208 aaKnown RBP7.79□□□□□ -1.16
XRN1-211ENST00000477237 ATP5J2-PTCD1G3V325 749 aa7.78□□□□□ -1.16
XRN1-211ENST00000477237 ITGB7P26010 798 aa7.78□□□□□ -1.16
XRN1-211ENST00000477237 A0A1W2PRU2 124 aa7.77□□□□□ -1.17
XRN1-211ENST00000477237 MAP2K3P46734 347 aa7.77□□□□□ -1.17
XRN1-211ENST00000477237 PDE4DQ08499 809 aa7.77□□□□□ -1.17
XRN1-211ENST00000477237 PPP2R2DQ66LE6 453 aa7.77□□□□□ -1.17
XRN1-211ENST00000477237 VSIG10Q8N0Z9 540 aa7.77□□□□□ -1.17
XRN1-211ENST00000477237 EPS8L1Q8TE68 723 aa7.77□□□□□ -1.17
XRN1-211ENST00000477237 NUCKS1Q9H1E3 243 aaKnown RBP7.77□□□□□ -1.17
XRN1-211ENST00000477237 SUV39H2Q9H5I1 410 aa7.77□□□□□ -1.17
XRN1-211ENST00000477237 RRAGCQ9HB90 399 aa7.77□□□□□ -1.17
XRN1-211ENST00000477237 THBS1P07996 1170 aa7.76□□□□□ -1.17
XRN1-211ENST00000477237 HOXB4P17483 251 aaPredicted RBP7.76□□□□□ -1.17
XRN1-211ENST00000477237 GRIN2CQ14957 1233 aa7.76□□□□□ -1.17
XRN1-211ENST00000477237 NBPF10Q6P3W6 841 aaKnown RBP7.76□□□□□ -1.17
XRN1-211ENST00000477237 NBPF15Q8N660 670 aa7.76□□□□□ -1.17
XRN1-211ENST00000477237 KLRG1Q96E93 195 aa7.76□□□□□ -1.17
XRN1-211ENST00000477237 C1QTNF9BB2RNN3 333 aa7.75□□□□□ -1.17
XRN1-211ENST00000477237 SLC27A3Q5K4L6 730 aa7.75□□□□□ -1.17
XRN1-211ENST00000477237 LINC00114Q6XXX2 140 aa7.75□□□□□ -1.17
XRN1-211ENST00000477237 GRIP2Q9C0E4 1043 aa7.75□□□□□ -1.17
XRN1-211ENST00000477237 SEPT12Q8IYM1 358 aa7.74□□□□□ -1.17
XRN1-211ENST00000477237 EDARADDQ8WWZ3 215 aa7.74□□□□□ -1.17
XRN1-211ENST00000477237 CFHR5Q9BXR6 569 aa7.74□□□□□ -1.17
XRN1-211ENST00000477237 RSPH6AQ9H0K4 717 aa7.74□□□□□ -1.17
XRN1-211ENST00000477237 F11P03951 625 aa7.73□□□□□ -1.17
XRN1-211ENST00000477237 CD163Q86VB7 1156 aa7.73□□□□□ -1.17
XRN1-211ENST00000477237 TIMMDC1Q9NPL8 285 aa7.73□□□□□ -1.17
XRN1-211ENST00000477237 SPATA31C2B4DYI2 1134 aa7.72□□□□□ -1.17
XRN1-211ENST00000477237 NLRP3Q96P20 1036 aa7.72□□□□□ -1.17
XRN1-211ENST00000477237 WDR44Q5JSH3 913 aa7.71□□□□□ -1.18
XRN1-211ENST00000477237 HMX1Q9NP08 348 aaPredicted RBP7.71□□□□□ -1.18
XRN1-211ENST00000477237 GDF2Q9UK05 429 aaPredicted RBP7.71□□□□□ -1.18
XRN1-211ENST00000477237 WASLO00401 505 aaPredicted RBP7.7□□□□□ -1.18
XRN1-211ENST00000477237 GIGYF1O75420 1035 aaPredicted RBP7.7□□□□□ -1.18
XRN1-211ENST00000477237 CHRNA4P43681 627 aa7.7□□□□□ -1.18
XRN1-211ENST00000477237 TAS1R3Q7RTX0 852 aa7.7□□□□□ -1.18
XRN1-211ENST00000477237 SEMA6BQ9H3T3 888 aa7.7□□□□□ -1.18
XRN1-211ENST00000477237 AP1G2O75843 785 aa7.69□□□□□ -1.18
XRN1-211ENST00000477237 ERVK-9P63128 1117 aa7.69□□□□□ -1.18
XRN1-211ENST00000477237 CLN3Q13286 438 aa7.69□□□□□ -1.18
XRN1-211ENST00000477237 PROCA1Q8NCQ7 364 aaPredicted RBP7.69□□□□□ -1.18
XRN1-211ENST00000477237 TRIM52Q96A61 297 aa7.69□□□□□ -1.18
XRN1-211ENST00000477237 GPAMQ9HCL2 828 aa7.69□□□□□ -1.18
XRN1-211ENST00000477237 C2CD2LO14523 706 aa7.68□□□□□ -1.18
XRN1-211ENST00000477237 AMPD1P23109 780 aa7.68□□□□□ -1.18
XRN1-211ENST00000477237 UBAP2LQ14157 1087 aaKnown RBP7.68□□□□□ -1.18
XRN1-211ENST00000477237 DOC2BQ14184 412 aa7.68□□□□□ -1.18
XRN1-211ENST00000477237 ZMYM1Q5SVZ6 1142 aa7.68□□□□□ -1.18
XRN1-211ENST00000477237 LCE3BQ5TA77 95 aa7.68□□□□□ -1.18
XRN1-211ENST00000477237 CC2D2BQ6DHV5 1058 aa7.68□□□□□ -1.18
XRN1-211ENST00000477237 GOLGA6L1Q8N7Z2 621 aa7.68□□□□□ -1.18
XRN1-211ENST00000477237 PNMA1Q8ND90 353 aa7.68□□□□□ -1.18
XRN1-211ENST00000477237 GNB5O14775 395 aa7.67□□□□□ -1.18
XRN1-211ENST00000477237 KRTAP4-12Q9BQ66 201 aa7.67□□□□□ -1.18
XRN1-211ENST00000477237 PHF24Q9UPV7 400 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms