RNA–Protein interactions for RNA: ENST00000476948.1

PWP2-204, Transcript of PWP2, small subunit processome component, humanhuman

TSL 3

Gene PWP2, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PWP2-204ENST00000476948 USP35Q9P2H5 1018 aa18.44■□□□□ 0.54
PWP2-204ENST00000476948 VPS72Q15906 364 aa18.43■□□□□ 0.54
PWP2-204ENST00000476948 TOM1L2Q6ZVM7 507 aa18.43■□□□□ 0.54
PWP2-204ENST00000476948 MRS2Q9HD23 443 aa18.43■□□□□ 0.54
PWP2-204ENST00000476948 EVA1CP58658 441 aa18.42■□□□□ 0.54
PWP2-204ENST00000476948 KDRP35968 1356 aa18.42■□□□□ 0.54
PWP2-204ENST00000476948 HMOX1P09601 288 aa18.41■□□□□ 0.54
PWP2-204ENST00000476948 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
PWP2-204ENST00000476948 RGS12O14924 1447 aa18.4■□□□□ 0.54
PWP2-204ENST00000476948 U2SURPO15042 1029 aaKnown RBP18.4■□□□□ 0.54
PWP2-204ENST00000476948 CARD10Q9BWT7 1032 aa18.4■□□□□ 0.54
PWP2-204ENST00000476948 CCDC9Q9Y3X0 531 aaKnown RBP18.4■□□□□ 0.54
PWP2-204ENST00000476948 TRPC5Q9UL62 973 aaPredicted RBP18.39■□□□□ 0.53
PWP2-204ENST00000476948 OVOS2A0A0G2JMS6 1433 aa18.39■□□□□ 0.53
PWP2-204ENST00000476948 VIRMAQ69YN4 1812 aaKnown RBP18.38■□□□□ 0.53
PWP2-204ENST00000476948 QTRT2Q9H974 415 aaKnown RBP18.38■□□□□ 0.53
PWP2-204ENST00000476948 DLG5Q8TDM6 1919 aa18.38■□□□□ 0.53
PWP2-204ENST00000476948 FAM98CQ17RN3 349 aaKnown RBP18.37■□□□□ 0.53
PWP2-204ENST00000476948 SULT6B1Q6IMI4 303 aa18.37■□□□□ 0.53
PWP2-204ENST00000476948 GJD4Q96KN9 370 aaPredicted RBP18.37■□□□□ 0.53
PWP2-204ENST00000476948 RSPH6AQ9H0K4 717 aa18.37■□□□□ 0.53
PWP2-204ENST00000476948 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
PWP2-204ENST00000476948 TNS2Q63HR2 1409 aa18.36■□□□□ 0.53
PWP2-204ENST00000476948 ZNF772Q68DY9 489 aaPredicted RBP18.36■□□□□ 0.53
PWP2-204ENST00000476948 TCP11L2Q8N4U5 519 aa18.36■□□□□ 0.53
PWP2-204ENST00000476948 CCER2I3L3R5 266 aa18.35■□□□□ 0.53
PWP2-204ENST00000476948 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
PWP2-204ENST00000476948 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
PWP2-204ENST00000476948 PNISRQ8TF01 805 aaKnown RBP18.35■□□□□ 0.53
PWP2-204ENST00000476948 SENP3-EIF4A1A0A087X0R7 540 aa18.34■□□□□ 0.53
PWP2-204ENST00000476948 PRKAR2BP31323 418 aa18.33■□□□□ 0.52
PWP2-204ENST00000476948 ADAMTS8Q9UP79 889 aa18.33■□□□□ 0.52
PWP2-204ENST00000476948 DOT1LQ8TEK3 1739 aa18.32■□□□□ 0.52
PWP2-204ENST00000476948 BARGINQ6ZT62 677 aa18.32■□□□□ 0.52
PWP2-204ENST00000476948 CCDC146Q8IYE0 955 aa18.32■□□□□ 0.52
PWP2-204ENST00000476948 IL2RBP14784 551 aa18.31■□□□□ 0.52
PWP2-204ENST00000476948 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
PWP2-204ENST00000476948 NUDCQ9Y266 331 aa18.31■□□□□ 0.52
PWP2-204ENST00000476948 WDR43Q15061 677 aaKnown RBP eCLIP18.3■□□□□ 0.52
PWP2-204ENST00000476948 PHACTR3Q96KR7 559 aa18.3■□□□□ 0.52
PWP2-204ENST00000476948 ADAMTS7Q9UKP4 1686 aa18.29■□□□□ 0.52
PWP2-204ENST00000476948 RBM6P78332 1123 aaKnown RBP18.29■□□□□ 0.52
PWP2-204ENST00000476948 FAM9BQ8IZU0 186 aa18.29■□□□□ 0.52
PWP2-204ENST00000476948 THRAP3Q9Y2W1 955 aaKnown RBP18.29■□□□□ 0.52
PWP2-204ENST00000476948 SCN11AQ9UI33 1791 aa18.27■□□□□ 0.52
PWP2-204ENST00000476948 SEPT12Q8IYM1 358 aa18.27■□□□□ 0.52
PWP2-204ENST00000476948 SBF2Q86WG5 1849 aa18.27■□□□□ 0.52
PWP2-204ENST00000476948 A0A0G2JS52 829 aa18.26■□□□□ 0.51
PWP2-204ENST00000476948 TATP17735 454 aaPredicted RBP18.26■□□□□ 0.51
PWP2-204ENST00000476948 RXRBP28702 533 aa18.26■□□□□ 0.51
PWP2-204ENST00000476948 MYT1Q01538 1121 aa18.26■□□□□ 0.51
PWP2-204ENST00000476948 RAPGEF4Q8WZA2 1011 aa18.26■□□□□ 0.51
PWP2-204ENST00000476948 KDM6AO15550 1401 aaPredicted RBP18.25■□□□□ 0.51
PWP2-204ENST00000476948 ONECUT3O60422 494 aaPredicted RBP18.25■□□□□ 0.51
PWP2-204ENST00000476948 MTHFSDQ2M296 383 aaKnown RBP18.25■□□□□ 0.51
PWP2-204ENST00000476948 FAM182BQ5T319 152 aa18.25■□□□□ 0.51
PWP2-204ENST00000476948 ITGB4P16144 1822 aa18.25■□□□□ 0.51
PWP2-204ENST00000476948 CYP27B1O15528 508 aa18.24■□□□□ 0.51
PWP2-204ENST00000476948 FCHSD2O94868 740 aa18.24■□□□□ 0.51
PWP2-204ENST00000476948 SIPA1L3O60292 1781 aaPredicted RBP18.24■□□□□ 0.51
PWP2-204ENST00000476948 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
PWP2-204ENST00000476948 NHSQ6T4R5 1651 aa18.22■□□□□ 0.51
PWP2-204ENST00000476948 PLEKHG2Q9H7P9 1386 aa18.22■□□□□ 0.51
PWP2-204ENST00000476948 MARCH10Q8NA82 808 aaPredicted RBP18.22■□□□□ 0.51
PWP2-204ENST00000476948 DDB1Q16531 1140 aa18.21■□□□□ 0.51
PWP2-204ENST00000476948 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
PWP2-204ENST00000476948 ZCRB1Q8TBF4 217 aaKnown RBP18.21■□□□□ 0.51
PWP2-204ENST00000476948 TNS1Q9HBL0 1735 aaKnown RBP18.2■□□□□ 0.5
PWP2-204ENST00000476948 RUNDC1Q96C34 613 aa18.2■□□□□ 0.5
PWP2-204ENST00000476948 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
PWP2-204ENST00000476948 PCDH11XQ9BZA7 1347 aa18.2■□□□□ 0.5
PWP2-204ENST00000476948 PCDH11YQ9BZA8 1340 aa18.2■□□□□ 0.5
PWP2-204ENST00000476948 MRC1P22897 1456 aa18.2■□□□□ 0.5
PWP2-204ENST00000476948 PHKG2P15735 406 aa18.19■□□□□ 0.5
PWP2-204ENST00000476948 DDX54Q8TDD1 881 aaKnown RBP18.19■□□□□ 0.5
PWP2-204ENST00000476948 CDCA7Q9BWT1 371 aaPredicted RBP18.19■□□□□ 0.5
PWP2-204ENST00000476948 MAP3K5Q99683 1374 aa18.18■□□□□ 0.5
PWP2-204ENST00000476948 APAF1O14727 1248 aa18.18■□□□□ 0.5
PWP2-204ENST00000476948 PAPPAQ13219 1627 aa18.18■□□□□ 0.5
PWP2-204ENST00000476948 BTAF1O14981 1849 aa18.18■□□□□ 0.5
PWP2-204ENST00000476948 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
PWP2-204ENST00000476948 EXOC5O00471 708 aa18.17■□□□□ 0.5
PWP2-204ENST00000476948 PLEKHO1Q53GL0 409 aaPredicted RBP18.17■□□□□ 0.5
PWP2-204ENST00000476948 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
PWP2-204ENST00000476948 DCTN1Q14203 1278 aa18.16■□□□□ 0.5
PWP2-204ENST00000476948 NFE2L2Q16236 605 aa18.16■□□□□ 0.5
PWP2-204ENST00000476948 PTF1AQ7RTS3 328 aa18.16■□□□□ 0.5
PWP2-204ENST00000476948 THUMPD2Q9BTF0 503 aaKnown RBP18.16■□□□□ 0.5
PWP2-204ENST00000476948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.16■□□□□ 0.5
PWP2-204ENST00000476948 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
PWP2-204ENST00000476948 AMOTQ4VCS5 1084 aa18.15■□□□□ 0.5
PWP2-204ENST00000476948 ILDR2Q71H61 639 aa18.15■□□□□ 0.5
PWP2-204ENST00000476948 KRT27Q7Z3Y8 459 aa18.15■□□□□ 0.5
PWP2-204ENST00000476948 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
PWP2-204ENST00000476948 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
PWP2-204ENST00000476948 GAS2L2Q8NHY3 880 aa18.14■□□□□ 0.49
PWP2-204ENST00000476948 KDM3BQ7LBC6 1761 aa18.14■□□□□ 0.49
PWP2-204ENST00000476948 SPDYE2BA6NHP3 402 aa18.13■□□□□ 0.49
PWP2-204ENST00000476948 SPDYE6P0CI01 402 aa18.13■□□□□ 0.49
PWP2-204ENST00000476948 PDE3BQ13370 1112 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms