RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 PPM1GO15355 546 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 FBLN1P23142 703 aa5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 TNNT2P45379 298 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 LTV1Q96GA3 475 aaPredicted RBP5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 PLEKHG2Q9H7P9 1386 aa5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 DISP2A7MBM2 1401 aa5.56□□□□□ -1.52
GAPVD1-216ENST00000474637 IL2RBP14784 551 aa5.55□□□□□ -1.52
GAPVD1-216ENST00000474637 PDE3BQ13370 1112 aa5.55□□□□□ -1.52
GAPVD1-216ENST00000474637 LRRC37A3O60309 1634 aa5.55□□□□□ -1.52
GAPVD1-216ENST00000474637 RALBP1Q15311 655 aa5.55□□□□□ -1.52
GAPVD1-216ENST00000474637 HSP90AB2PQ58FF8 381 aa5.55□□□□□ -1.52
GAPVD1-216ENST00000474637 EXOC5O00471 708 aa5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 DDB1Q16531 1140 aa5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 CCDC125Q86Z20 511 aa5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 CFAP53Q96M91 514 aa5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 NCAPD2Q15021 1401 aa5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 TNS2Q63HR2 1409 aa5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 RGPD2P0DJD1 1756 aa5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 TATP17735 454 aaPredicted RBP5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 EIF4A2Q14240 407 aaKnown RBP5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 NBPF6Q5VWK0 638 aa5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 FAM196AQ6ZSG2 479 aa5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 NBPF4Q96M43 638 aa5.54□□□□□ -1.52
GAPVD1-216ENST00000474637 OVOS2A0A0G2JMS6 1433 aa5.53□□□□□ -1.52
GAPVD1-216ENST00000474637 BCL9O00512 1426 aa5.53□□□□□ -1.52
GAPVD1-216ENST00000474637 PARD3Q8TEW0 1356 aa5.53□□□□□ -1.52
GAPVD1-216ENST00000474637 SENP3-EIF4A1A0A087X0R7 540 aa5.53□□□□□ -1.52
GAPVD1-216ENST00000474637 MTHFSP49914 203 aa5.53□□□□□ -1.52
GAPVD1-216ENST00000474637 RAPGEF4Q8WZA2 1011 aa5.53□□□□□ -1.52
GAPVD1-216ENST00000474637 RGPD1P0DJD0 1748 aa5.53□□□□□ -1.52
GAPVD1-216ENST00000474637 IGSF1Q8N6C5 1336 aa5.53□□□□□ -1.52
GAPVD1-216ENST00000474637 PPP2R1AP30153 589 aa5.53□□□□□ -1.52
GAPVD1-216ENST00000474637 ERICH6Q7L0X2 663 aa5.53□□□□□ -1.52
GAPVD1-216ENST00000474637 DIAPH1O60610 1272 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 IL13P35225 146 aa5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 SF3B2Q13435 895 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 UPF1Q92900 1129 aaKnown RBP eCLIP5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 EYA1Q99502 592 aa5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 PKD1L3Q7Z443 1732 aa5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 ZBED9Q6R2W3 1325 aa5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 ZCRB1Q8TBF4 217 aaKnown RBP5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.52□□□□□ -1.532e-6■■■□□ 15.6
GAPVD1-216ENST00000474637 SPG7Q9UQ90 795 aa5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 NUDCQ9Y266 331 aa5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 COL3A1P02461 1466 aaPredicted RBP5.52□□□□□ -1.53
GAPVD1-216ENST00000474637 PCDH11XQ9BZA7 1347 aa5.51□□□□□ -1.53
GAPVD1-216ENST00000474637 PCDH11YQ9BZA8 1340 aa5.51□□□□□ -1.53
GAPVD1-216ENST00000474637 MYCNP04198 464 aaPredicted RBP5.51□□□□□ -1.53
GAPVD1-216ENST00000474637 USHBP1Q8N6Y0 703 aa5.51□□□□□ -1.53
GAPVD1-216ENST00000474637 ANO8Q9HCE9 1232 aaPredicted RBP5.51□□□□□ -1.53
GAPVD1-216ENST00000474637 MEGF6O75095 1541 aa5.51□□□□□ -1.53
GAPVD1-216ENST00000474637 MYBBP1AQ9BQG0 1328 aaKnown RBP5.51□□□□□ -1.53
GAPVD1-216ENST00000474637 MARCH10Q8NA82 808 aaPredicted RBP5.51□□□□□ -1.53
GAPVD1-216ENST00000474637 KDRP35968 1356 aa5.51□□□□□ -1.53
GAPVD1-216ENST00000474637 SHANK3Q9BYB0 1731 aa5.51□□□□□ -1.53
GAPVD1-216ENST00000474637 AMOTQ4VCS5 1084 aa5.5□□□□□ -1.53
GAPVD1-216ENST00000474637 PLEKHO1Q53GL0 409 aaPredicted RBP5.5□□□□□ -1.53
GAPVD1-216ENST00000474637 PPP4R2Q9NY27 417 aa5.5□□□□□ -1.53
GAPVD1-216ENST00000474637 SBF2Q86WG5 1849 aa5.5□□□□□ -1.53
GAPVD1-216ENST00000474637 ERICH6BQ5W0A0 696 aa5.5□□□□□ -1.53
GAPVD1-216ENST00000474637 PNISRQ8TF01 805 aaKnown RBP5.5□□□□□ -1.53
GAPVD1-216ENST00000474637 TNS1Q9HBL0 1735 aaKnown RBP5.5□□□□□ -1.53
GAPVD1-216ENST00000474637 NHSQ6T4R5 1651 aa5.5□□□□□ -1.53
GAPVD1-216ENST00000474637 RGPD3A6NKT7 1758 aaPredicted RBP5.5□□□□□ -1.53
GAPVD1-216ENST00000474637 RGPD4Q7Z3J3 1758 aa5.5□□□□□ -1.53
GAPVD1-216ENST00000474637 HSP90AB1P08238 724 aaKnown RBP5.49□□□□□ -1.53
GAPVD1-216ENST00000474637 BAG6P46379 1132 aa5.49□□□□□ -1.53
GAPVD1-216ENST00000474637 SULT6B1Q6IMI4 303 aa5.49□□□□□ -1.53
GAPVD1-216ENST00000474637 B4GALNT3Q6L9W6 998 aa5.49□□□□□ -1.53
GAPVD1-216ENST00000474637 DDX54Q8TDD1 881 aaKnown RBP5.49□□□□□ -1.53
GAPVD1-216ENST00000474637 BCL11BQ9C0K0 894 aaPredicted RBP5.49□□□□□ -1.53
GAPVD1-216ENST00000474637 PNNQ9H307 717 aaKnown RBP5.49□□□□□ -1.53
GAPVD1-216ENST00000474637 U2SURPO15042 1029 aaKnown RBP5.49□□□□□ -1.53
GAPVD1-216ENST00000474637 IFNL2Q8IZJ0 200 aa5.49□□□□□ -1.53
GAPVD1-216ENST00000474637 TRIM37O94972 964 aa5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 NKX1-1Q15270 411 aaPredicted RBP5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 FAM182BQ5T319 152 aa5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 U3KPZ7 1027 aaPredicted RBP5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 DOT1LQ8TEK3 1739 aa5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 FCHSD2O94868 740 aa5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 APBA3O96018 575 aa5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 NEFMP07197 916 aa5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 HMGB2P26583 209 aaKnown RBP5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 DEKP35659 375 aaKnown RBP5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 C1orf141Q5JVX7 400 aa5.48□□□□□ -1.53
GAPVD1-216ENST00000474637 U2AF1L5P0DN76 240 aaPredicted RBP5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 PHKG2P15735 406 aa5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 U2AF1Q01081 240 aaKnown RBP eCLIP5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 AKAP4Q5JQC9 854 aa5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 ZNF530Q6P9A1 599 aaPredicted RBP5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 AEBP1Q8IUX7 1158 aa5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 GAS2L2Q8NHY3 880 aa5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 PLSCR1O15162 318 aa5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 CYP27B1O15528 508 aa5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 HMOX1P09601 288 aa5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 DCAF5Q96JK2 942 aa5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 SALL2Q9Y467 1007 aaPredicted RBP5.47□□□□□ -1.53
GAPVD1-216ENST00000474637 ERVV-2B6SEH9 535 aa5.46□□□□□ -1.53
GAPVD1-216ENST00000474637 ACSBG1Q96GR2 724 aa5.46□□□□□ -1.53
GAPVD1-216ENST00000474637 RSPH6AQ9H0K4 717 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms