RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RETREG2Q8NC44 543 aa7.45□□□□□ -1.22
BRCA1-212ENST00000473961 FAM174AQ8TBP5 190 aa7.45□□□□□ -1.22
BRCA1-212ENST00000473961 PBXIP1Q96AQ6 731 aa7.45□□□□□ -1.22
BRCA1-212ENST00000473961 EVA1BQ9NVM1 165 aa7.45□□□□□ -1.22
BRCA1-212ENST00000473961 CFAP99D6REC4 459 aa7.44□□□□□ -1.22
BRCA1-212ENST00000473961 CELA2BP08218 269 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-212ENST00000473961 MAP3K10Q02779 954 aa7.44□□□□□ -1.22
BRCA1-212ENST00000473961 PTPRNQ16849 979 aa7.44□□□□□ -1.22
BRCA1-212ENST00000473961 DESI1Q6ICB0 168 aa7.44□□□□□ -1.22
BRCA1-212ENST00000473961 VWA5B2Q8N398 1253 aa7.44□□□□□ -1.22
BRCA1-212ENST00000473961 PRR7Q8TB68 274 aa7.44□□□□□ -1.22
BRCA1-212ENST00000473961 CNTNAP5Q8WYK1 1306 aa7.44□□□□□ -1.22
BRCA1-212ENST00000473961 TTLL8A6PVC2 850 aa7.43□□□□□ -1.22
BRCA1-212ENST00000473961 PHF20L1A8MW92 1017 aa7.43□□□□□ -1.22
BRCA1-212ENST00000473961 BAG6P46379 1132 aa7.43□□□□□ -1.22
BRCA1-212ENST00000473961 KCNH2Q12809 1159 aa7.43□□□□□ -1.22
BRCA1-212ENST00000473961 IRF5Q13568 498 aa7.43□□□□□ -1.22
BRCA1-212ENST00000473961 LRRN4Q8WUT4 740 aa7.43□□□□□ -1.22
BRCA1-212ENST00000473961 TRIM34Q9BYJ4 488 aa7.43□□□□□ -1.22
BRCA1-212ENST00000473961 HMX1Q9NP08 348 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-212ENST00000473961 CDC14CA4D256 554 aa7.42□□□□□ -1.22
BRCA1-212ENST00000473961 SLC35F4A4IF30 521 aa7.42□□□□□ -1.22
BRCA1-212ENST00000473961 CSB-PGBD3P0DP91 1061 aa7.42□□□□□ -1.22
BRCA1-212ENST00000473961 ITGA6P23229 1130 aa7.42□□□□□ -1.22
BRCA1-212ENST00000473961 EIF4G2P78344 907 aaKnown RBP eCLIP7.42□□□□□ -1.22
BRCA1-212ENST00000473961 SEMA3FQ13275 785 aa7.42□□□□□ -1.22
BRCA1-212ENST00000473961 NR5A1Q13285 461 aa7.42□□□□□ -1.22
BRCA1-212ENST00000473961 SV2AQ7L0J3 742 aa7.42□□□□□ -1.22
BRCA1-212ENST00000473961 AEBP1Q8IUX7 1158 aa7.42□□□□□ -1.22
BRCA1-212ENST00000473961 ZNF592Q92610 1267 aa7.42□□□□□ -1.22
BRCA1-212ENST00000473961 USTQ9Y2C2 406 aa7.42□□□□□ -1.22
BRCA1-212ENST00000473961 FIGNL2A6NMB9 653 aa7.41□□□□□ -1.22
BRCA1-212ENST00000473961 VAC14Q08AM6 782 aa7.41□□□□□ -1.22
BRCA1-212ENST00000473961 ARID5BQ14865 1188 aa7.41□□□□□ -1.22
BRCA1-212ENST00000473961 KRTAP4-8A0A0G2JLE6 195 aa7.4□□□□□ -1.22
BRCA1-212ENST00000473961 PPP1R12CQ9BZL4 782 aa7.4□□□□□ -1.22
BRCA1-212ENST00000473961 GRM5P41594 1212 aa7.39□□□□□ -1.23
BRCA1-212ENST00000473961 SRSF11Q05519 484 aaKnown RBP7.39□□□□□ -1.23
BRCA1-212ENST00000473961 TSEN34Q9BSV6 310 aaKnown RBP7.39□□□□□ -1.23
BRCA1-212ENST00000473961 ALG2Q9H553 416 aa7.39□□□□□ -1.23
BRCA1-212ENST00000473961 ZC3H4Q9UPT8 1303 aaKnown RBP7.38□□□□□ -1.23
BRCA1-212ENST00000473961 FURINP09958 794 aa7.38□□□□□ -1.23
BRCA1-212ENST00000473961 NR6A1Q15406 480 aa7.38□□□□□ -1.23
BRCA1-212ENST00000473961 SH3RF1Q7Z6J0 888 aa7.38□□□□□ -1.23
BRCA1-212ENST00000473961 FOXJ1Q92949 421 aa7.38□□□□□ -1.23
BRCA1-212ENST00000473961 RFX1P22670 979 aa7.37□□□□□ -1.23
BRCA1-212ENST00000473961 GAS6Q14393 721 aa7.37□□□□□ -1.23
BRCA1-212ENST00000473961 ENAMQ9NRM1 1142 aa7.37□□□□□ -1.23
BRCA1-212ENST00000473961 PALM3A6NDB9 673 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-212ENST00000473961 CFAP70Q5T0N1 1121 aa7.36□□□□□ -1.23
BRCA1-212ENST00000473961 LYPD8Q6UX82 237 aa7.36□□□□□ -1.23
BRCA1-212ENST00000473961 NPM2Q86SE8 214 aaKnown RBP7.36□□□□□ -1.23
BRCA1-212ENST00000473961 ADAMTS19Q8TE59 1207 aa7.36□□□□□ -1.23
BRCA1-212ENST00000473961 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-212ENST00000473961 BTBD11A6QL63 1104 aa7.35□□□□□ -1.23
BRCA1-212ENST00000473961 GPR37L1O60883 481 aa7.35□□□□□ -1.23
BRCA1-212ENST00000473961 BRD1O95696 1058 aa7.35□□□□□ -1.23
BRCA1-212ENST00000473961 LMOD1P29536 600 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-212ENST00000473961 KCNA1Q09470 495 aa7.35□□□□□ -1.23
BRCA1-212ENST00000473961 NR1H3Q13133 447 aa7.35□□□□□ -1.23
BRCA1-212ENST00000473961 BEND7Q8N7W2 519 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-212ENST00000473961 ZBBXA8MT70 800 aa7.34□□□□□ -1.23
BRCA1-212ENST00000473961 PER1O15534 1290 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-212ENST00000473961 C4orf48Q5BLP8 95 aa7.34□□□□□ -1.23
BRCA1-212ENST00000473961 B4GALNT3Q6L9W6 998 aa7.34□□□□□ -1.23
BRCA1-212ENST00000473961 PODNQ7Z5L7 613 aa7.34□□□□□ -1.23
BRCA1-212ENST00000473961 ARMC2Q8NEN0 867 aa7.34□□□□□ -1.23
BRCA1-212ENST00000473961 EPS8L1Q8TE68 723 aa7.34□□□□□ -1.23
BRCA1-212ENST00000473961 MCCD1P59942 119 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-212ENST00000473961 TMCO4Q5TGY1 634 aa7.33□□□□□ -1.24
BRCA1-212ENST00000473961 TFIP11Q9UBB9 837 aaKnown RBP7.33□□□□□ -1.24
BRCA1-212ENST00000473961 FKBPLQ9UIM3 349 aa7.33□□□□□ -1.24
BRCA1-212ENST00000473961 KRBA1A5PL33 1030 aa7.32□□□□□ -1.24
BRCA1-212ENST00000473961 NFATC2IPQ8NCF5 419 aa7.32□□□□□ -1.24
BRCA1-212ENST00000473961 GPKOWQ92917 476 aaPredicted RBP eCLIP7.32□□□□□ -1.24
BRCA1-212ENST00000473961 SPINT1O43278 529 aa7.31□□□□□ -1.24
BRCA1-212ENST00000473961 ATP9BO43861 1147 aa7.31□□□□□ -1.24
BRCA1-212ENST00000473961 ATG7O95352 703 aa7.31□□□□□ -1.24
BRCA1-212ENST00000473961 FSHRP23945 695 aa7.31□□□□□ -1.24
BRCA1-212ENST00000473961 GPSM3Q9Y4H4 160 aa7.31□□□□□ -1.24
BRCA1-212ENST00000473961 MAFBQ9Y5Q3 323 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-212ENST00000473961 SENP3-EIF4A1A0A087X0R7 540 aa7.3□□□□□ -1.24
BRCA1-212ENST00000473961 ITGB7P26010 798 aa7.3□□□□□ -1.24
BRCA1-212ENST00000473961 CTHP32929 405 aa7.3□□□□□ -1.24
BRCA1-212ENST00000473961 NBPF14Q5TI25 921 aa7.3□□□□□ -1.24
BRCA1-212ENST00000473961 UCN2Q96RP3 112 aa7.3□□□□□ -1.24
BRCA1-212ENST00000473961 PTK2Q05397 1052 aa7.29□□□□□ -1.24
BRCA1-212ENST00000473961 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
BRCA1-212ENST00000473961 NEDD1Q8NHV4 660 aa7.29□□□□□ -1.24
BRCA1-212ENST00000473961 VRTNQ9H8Y1 702 aa7.29□□□□□ -1.24
BRCA1-212ENST00000473961 F12P00748 615 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-212ENST00000473961 FBXO45P0C2W1 286 aa7.28□□□□□ -1.24
BRCA1-212ENST00000473961 SRPK2P78362 688 aaKnown RBP7.28□□□□□ -1.24
BRCA1-212ENST00000473961 GZF1Q9H116 711 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-212ENST00000473961 EMILIN1Q9Y6C2 1016 aa7.28□□□□□ -1.24
BRCA1-212ENST00000473961 BCRP11274 1271 aa7.27□□□□□ -1.25
BRCA1-212ENST00000473961 CUEDC1Q9NWM3 386 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-212ENST00000473961 LZTS3O60299 673 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-212ENST00000473961 CTSOP43234 321 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-212ENST00000473961 CBLBQ13191 982 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms