RNA–Protein interactions for RNA: ENST00000473662.1

AMMECR1-204, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

TSL 3

Gene AMMECR1, Length 418 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-204ENST00000473662 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
AMMECR1-204ENST00000473662 CDCA7Q9BWT1 371 aaPredicted RBP16.11■□□□□ 0.17
AMMECR1-204ENST00000473662 SHANK3Q9BYB0 1731 aa16.11■□□□□ 0.17
AMMECR1-204ENST00000473662 U2AF1L5P0DN76 240 aaPredicted RBP16.1■□□□□ 0.17
AMMECR1-204ENST00000473662 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
AMMECR1-204ENST00000473662 U2AF1Q01081 240 aaKnown RBP eCLIP16.1■□□□□ 0.17
AMMECR1-204ENST00000473662 DDB1Q16531 1140 aa16.1■□□□□ 0.17
AMMECR1-204ENST00000473662 FAM182BQ5T319 152 aa16.1■□□□□ 0.17
AMMECR1-204ENST00000473662 NUDCQ9Y266 331 aa16.1■□□□□ 0.17
AMMECR1-204ENST00000473662 TNS2Q63HR2 1409 aa16.09■□□□□ 0.17
AMMECR1-204ENST00000473662 EXOC5O00471 708 aa16.08■□□□□ 0.16
AMMECR1-204ENST00000473662 KRT27Q7Z3Y8 459 aa16.08■□□□□ 0.16
AMMECR1-204ENST00000473662 RSPH6AQ9H0K4 717 aa16.08■□□□□ 0.16
AMMECR1-204ENST00000473662 PKD1L3Q7Z443 1732 aa16.08■□□□□ 0.16
AMMECR1-204ENST00000473662 MIER1Q8N108 512 aa16.07■□□□□ 0.16
AMMECR1-204ENST00000473662 MARCH10Q8NA82 808 aaPredicted RBP16.07■□□□□ 0.16
AMMECR1-204ENST00000473662 ZCRB1Q8TBF4 217 aaKnown RBP16.07■□□□□ 0.16
AMMECR1-204ENST00000473662 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
AMMECR1-204ENST00000473662 PRKAR2BP31323 418 aa16.06■□□□□ 0.16
AMMECR1-204ENST00000473662 PDE3BQ13370 1112 aa16.06■□□□□ 0.16
AMMECR1-204ENST00000473662 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
AMMECR1-204ENST00000473662 CYP27B1O15528 508 aa16.04■□□□□ 0.16
AMMECR1-204ENST00000473662 PHACTR3Q96KR7 559 aa16.04■□□□□ 0.16
AMMECR1-204ENST00000473662 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
AMMECR1-204ENST00000473662 FCHSD2O94868 740 aa16.03■□□□□ 0.16
AMMECR1-204ENST00000473662 PNISRQ8TF01 805 aaKnown RBP16.03■□□□□ 0.16
AMMECR1-204ENST00000473662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.03■□□□□ 0.16
AMMECR1-204ENST00000473662 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.16
AMMECR1-204ENST00000473662 MTHFSDQ2M296 383 aaKnown RBP16.02■□□□□ 0.16
AMMECR1-204ENST00000473662 PLEKHO1Q53GL0 409 aaPredicted RBP16.02■□□□□ 0.16
AMMECR1-204ENST00000473662 PLEKHF1Q96S99 279 aa16.02■□□□□ 0.16
AMMECR1-204ENST00000473662 SPG7Q9UQ90 795 aa16.02■□□□□ 0.16
AMMECR1-204ENST00000473662 PCDH11XQ9BZA7 1347 aa16.01■□□□□ 0.15
AMMECR1-204ENST00000473662 PCDH11YQ9BZA8 1340 aa16.01■□□□□ 0.15
AMMECR1-204ENST00000473662 ZNF530Q6P9A1 599 aaPredicted RBP16.01■□□□□ 0.15
AMMECR1-204ENST00000473662 PLEKHG2Q9H7P9 1386 aa16■□□□□ 0.15
AMMECR1-204ENST00000473662 KAT6BQ8WYB5 2073 aa16■□□□□ 0.15
AMMECR1-204ENST00000473662 PHKG2P15735 406 aa16■□□□□ 0.15
AMMECR1-204ENST00000473662 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
AMMECR1-204ENST00000473662 CCDC146Q8IYE0 955 aa16■□□□□ 0.15
AMMECR1-204ENST00000473662 SBF2Q86WG5 1849 aa15.99■□□□□ 0.15
AMMECR1-204ENST00000473662 EP400Q96L91 3159 aa15.99■□□□□ 0.15
AMMECR1-204ENST00000473662 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
AMMECR1-204ENST00000473662 FAM196AQ6ZSG2 479 aa15.98■□□□□ 0.15
AMMECR1-204ENST00000473662 PTF1AQ7RTS3 328 aa15.98■□□□□ 0.15
AMMECR1-204ENST00000473662 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
AMMECR1-204ENST00000473662 TOGARAM1Q9Y4F4 1720 aa15.97■□□□□ 0.15
AMMECR1-204ENST00000473662 ACSBG1Q96GR2 724 aa15.97■□□□□ 0.15
AMMECR1-204ENST00000473662 DOT1LQ8TEK3 1739 aa15.97■□□□□ 0.15
AMMECR1-204ENST00000473662 BCL9O00512 1426 aa15.96■□□□□ 0.15
AMMECR1-204ENST00000473662 KCNQ2O43526 872 aa15.96■□□□□ 0.15
AMMECR1-204ENST00000473662 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.15
AMMECR1-204ENST00000473662 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.15
AMMECR1-204ENST00000473662 KDM6AO15550 1401 aaPredicted RBP15.95■□□□□ 0.14
AMMECR1-204ENST00000473662 TRIM37O94972 964 aa15.95■□□□□ 0.14
AMMECR1-204ENST00000473662 AKAP4Q5JQC9 854 aa15.95■□□□□ 0.14
AMMECR1-204ENST00000473662 C1orf141Q5JVX7 400 aa15.95■□□□□ 0.14
AMMECR1-204ENST00000473662 MPRIPQ6WCQ1 1025 aa15.95■□□□□ 0.14
AMMECR1-204ENST00000473662 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
AMMECR1-204ENST00000473662 DLG5Q8TDM6 1919 aa15.95■□□□□ 0.14
AMMECR1-204ENST00000473662 VIRMAQ69YN4 1812 aaKnown RBP15.94■□□□□ 0.14
AMMECR1-204ENST00000473662 SENP3-EIF4A1A0A087X0R7 540 aa15.94■□□□□ 0.14
AMMECR1-204ENST00000473662 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
AMMECR1-204ENST00000473662 PNNQ9H307 717 aaKnown RBP15.94■□□□□ 0.14
AMMECR1-204ENST00000473662 MAPK8IP3Q9UPT6 1336 aa15.94■□□□□ 0.14
AMMECR1-204ENST00000473662 NHSQ6T4R5 1651 aa15.93■□□□□ 0.14
AMMECR1-204ENST00000473662 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
AMMECR1-204ENST00000473662 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
AMMECR1-204ENST00000473662 LGR6Q9HBX8 967 aa15.93■□□□□ 0.14
AMMECR1-204ENST00000473662 RRP7AQ9Y3A4 280 aaKnown RBP15.93■□□□□ 0.14
AMMECR1-204ENST00000473662 ITGB4P16144 1822 aa15.93■□□□□ 0.14
AMMECR1-204ENST00000473662 SCN11AQ9UI33 1791 aa15.92■□□□□ 0.14
AMMECR1-204ENST00000473662 MAP3K5Q99683 1374 aa15.92■□□□□ 0.14
AMMECR1-204ENST00000473662 TNS1Q9HBL0 1735 aaKnown RBP15.92■□□□□ 0.14
AMMECR1-204ENST00000473662 NFE2L2Q16236 605 aa15.92■□□□□ 0.14
AMMECR1-204ENST00000473662 UPF1Q92900 1129 aaKnown RBP eCLIP15.92■□□□□ 0.14
AMMECR1-204ENST00000473662 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
AMMECR1-204ENST00000473662 RNMTO43148 476 aaKnown RBP15.91■□□□□ 0.14
AMMECR1-204ENST00000473662 NEFMP07197 916 aa15.91■□□□□ 0.14
AMMECR1-204ENST00000473662 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
AMMECR1-204ENST00000473662 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
AMMECR1-204ENST00000473662 IL17REQ8NFR9 667 aa15.91■□□□□ 0.14
AMMECR1-204ENST00000473662 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
AMMECR1-204ENST00000473662 SYTL4Q96C24 671 aaPredicted RBP15.91■□□□□ 0.14
AMMECR1-204ENST00000473662 DCAF5Q96JK2 942 aa15.91■□□□□ 0.14
AMMECR1-204ENST00000473662 ADAMTS7Q9UKP4 1686 aa15.91■□□□□ 0.14
AMMECR1-204ENST00000473662 BTAF1O14981 1849 aa15.9■□□□□ 0.14
AMMECR1-204ENST00000473662 APAF1O14727 1248 aa15.9■□□□□ 0.14
AMMECR1-204ENST00000473662 DCTN1Q14203 1278 aa15.9■□□□□ 0.14
AMMECR1-204ENST00000473662 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
AMMECR1-204ENST00000473662 NEUROD2Q15784 382 aa15.89■□□□□ 0.13
AMMECR1-204ENST00000473662 MCM10Q7L590 875 aa15.89■□□□□ 0.13
AMMECR1-204ENST00000473662 RIPK4P57078 832 aa15.88■□□□□ 0.13
AMMECR1-204ENST00000473662 PIGBQ92521 554 aa15.88■□□□□ 0.13
AMMECR1-204ENST00000473662 THUMPD2Q9BTF0 503 aaKnown RBP15.88■□□□□ 0.13
AMMECR1-204ENST00000473662 ERVV-2B6SEH9 535 aa15.87■□□□□ 0.13
AMMECR1-204ENST00000473662 CEMIPQ8WUJ3 1361 aa15.87■□□□□ 0.13
AMMECR1-204ENST00000473662 MRC1P22897 1456 aa15.86■□□□□ 0.13
AMMECR1-204ENST00000473662 APBA3O96018 575 aa15.86■□□□□ 0.13
AMMECR1-204ENST00000473662 CABP4P57796 275 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms