RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 TATP17735 454 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC12-217ENST00000473348 TCP11L2Q8N4U5 519 aa16.62■□□□□ 0.25
TRAPPC12-217ENST00000473348 TRPC5Q9UL62 973 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC12-217ENST00000473348 IL2RBP14784 551 aa16.61■□□□□ 0.25
TRAPPC12-217ENST00000473348 ZNF772Q68DY9 489 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC12-217ENST00000473348 PHACTR3Q96KR7 559 aa16.61■□□□□ 0.25
TRAPPC12-217ENST00000473348 THRAP3Q9Y2W1 955 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-217ENST00000473348 TNS2Q63HR2 1409 aa16.6■□□□□ 0.25
TRAPPC12-217ENST00000473348 ADAMTS7Q9UKP4 1686 aa16.59■□□□□ 0.25
TRAPPC12-217ENST00000473348 GJD4Q96KN9 370 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC12-217ENST00000473348 QTRT2Q9H974 415 aaKnown RBP16.59■□□□□ 0.25
TRAPPC12-217ENST00000473348 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
TRAPPC12-217ENST00000473348 KAT6BQ8WYB5 2073 aa16.58■□□□□ 0.25
TRAPPC12-217ENST00000473348 SENP3-EIF4A1A0A087X0R7 540 aa16.58■□□□□ 0.24
TRAPPC12-217ENST00000473348 APAF1O14727 1248 aa16.58■□□□□ 0.24
TRAPPC12-217ENST00000473348 BARGINQ6ZT62 677 aa16.58■□□□□ 0.24
TRAPPC12-217ENST00000473348 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC12-217ENST00000473348 DOT1LQ8TEK3 1739 aa16.58■□□□□ 0.24
TRAPPC12-217ENST00000473348 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC12-217ENST00000473348 ITGB4P16144 1822 aa16.57■□□□□ 0.24
TRAPPC12-217ENST00000473348 FAM98CQ17RN3 349 aaKnown RBP16.57■□□□□ 0.24
TRAPPC12-217ENST00000473348 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC12-217ENST00000473348 CDCA7Q9BWT1 371 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC12-217ENST00000473348 TMPOP42166 694 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-217ENST00000473348 HNRNPUQ00839 825 aaKnown RBP eCLIP16.56■□□□□ 0.24
TRAPPC12-217ENST00000473348 NFE2L2Q16236 605 aa16.56■□□□□ 0.24
TRAPPC12-217ENST00000473348 MTHFSDQ2M296 383 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-217ENST00000473348 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
TRAPPC12-217ENST00000473348 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
TRAPPC12-217ENST00000473348 SPG7Q9UQ90 795 aa16.56■□□□□ 0.24
TRAPPC12-217ENST00000473348 RRP7AQ9Y3A4 280 aaKnown RBP16.56■□□□□ 0.24
TRAPPC12-217ENST00000473348 SBF2Q86WG5 1849 aa16.55■□□□□ 0.24
TRAPPC12-217ENST00000473348 ZNF530Q6P9A1 599 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC12-217ENST00000473348 YTHDC1Q96MU7 727 aaKnown RBP16.55■□□□□ 0.24
TRAPPC12-217ENST00000473348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.55■□□□□ 0.24
TRAPPC12-217ENST00000473348 RGS17Q9UGC6 210 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC12-217ENST00000473348 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
TRAPPC12-217ENST00000473348 PCDH11XQ9BZA7 1347 aa16.53■□□□□ 0.24
TRAPPC12-217ENST00000473348 PCDH11YQ9BZA8 1340 aa16.53■□□□□ 0.24
TRAPPC12-217ENST00000473348 A0A0G2JS52 829 aa16.53■□□□□ 0.24
TRAPPC12-217ENST00000473348 MYT1Q01538 1121 aa16.53■□□□□ 0.24
TRAPPC12-217ENST00000473348 NEUROD2Q15784 382 aa16.53■□□□□ 0.24
TRAPPC12-217ENST00000473348 ZCRB1Q8TBF4 217 aaKnown RBP16.53■□□□□ 0.24
TRAPPC12-217ENST00000473348 RIPK4P57078 832 aa16.52■□□□□ 0.24
TRAPPC12-217ENST00000473348 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.24
TRAPPC12-217ENST00000473348 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
TRAPPC12-217ENST00000473348 SALL2Q9Y467 1007 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC12-217ENST00000473348 DDB1Q16531 1140 aa16.51■□□□□ 0.23
TRAPPC12-217ENST00000473348 EXOC5O00471 708 aa16.5■□□□□ 0.23
TRAPPC12-217ENST00000473348 CYP27B1O15528 508 aa16.5■□□□□ 0.23
TRAPPC12-217ENST00000473348 PHKG2P15735 406 aa16.5■□□□□ 0.23
TRAPPC12-217ENST00000473348 LMOD3Q0VAK6 560 aa16.5■□□□□ 0.23
TRAPPC12-217ENST00000473348 AKAP4Q5JQC9 854 aa16.5■□□□□ 0.23
TRAPPC12-217ENST00000473348 POTEAQ6S8J7 498 aa16.5■□□□□ 0.23
TRAPPC12-217ENST00000473348 IFNL2Q8IZJ0 200 aa16.5■□□□□ 0.23
TRAPPC12-217ENST00000473348 NGEFQ8N5V2 710 aa16.5■□□□□ 0.23
TRAPPC12-217ENST00000473348 KDM3BQ7LBC6 1761 aa16.5■□□□□ 0.23
TRAPPC12-217ENST00000473348 GNAT3A8MTJ3 354 aa16.49■□□□□ 0.23
TRAPPC12-217ENST00000473348 KDM6AO15550 1401 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC12-217ENST00000473348 ONECUT3O60422 494 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC12-217ENST00000473348 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
TRAPPC12-217ENST00000473348 NHSQ6T4R5 1651 aa16.49■□□□□ 0.23
TRAPPC12-217ENST00000473348 MRC1P22897 1456 aa16.48■□□□□ 0.23
TRAPPC12-217ENST00000473348 ZBED9Q6R2W3 1325 aa16.48■□□□□ 0.23
TRAPPC12-217ENST00000473348 RGS12O14924 1447 aa16.48■□□□□ 0.23
TRAPPC12-217ENST00000473348 RXRBP28702 533 aa16.48■□□□□ 0.23
TRAPPC12-217ENST00000473348 CCDC27Q2M243 656 aa16.48■□□□□ 0.23
TRAPPC12-217ENST00000473348 SEPT12Q8IYM1 358 aa16.48■□□□□ 0.23
TRAPPC12-217ENST00000473348 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
TRAPPC12-217ENST00000473348 TRIM35Q9UPQ4 493 aa16.48■□□□□ 0.23
TRAPPC12-217ENST00000473348 RTF1Q92541 710 aaKnown RBP16.47■□□□□ 0.23
TRAPPC12-217ENST00000473348 PAPPAQ13219 1627 aa16.47■□□□□ 0.23
TRAPPC12-217ENST00000473348 HTATSF1O43719 755 aaKnown RBP16.46■□□□□ 0.23
TRAPPC12-217ENST00000473348 HSP90AB1P08238 724 aaKnown RBP16.46■□□□□ 0.23
TRAPPC12-217ENST00000473348 DCTN1Q14203 1278 aa16.46■□□□□ 0.23
TRAPPC12-217ENST00000473348 MCM10Q7L590 875 aa16.46■□□□□ 0.23
TRAPPC12-217ENST00000473348 ZNF521Q96K83 1311 aa16.45■□□□□ 0.22
TRAPPC12-217ENST00000473348 BTAF1O14981 1849 aa16.45■□□□□ 0.22
TRAPPC12-217ENST00000473348 MPRIPQ6WCQ1 1025 aa16.45■□□□□ 0.22
TRAPPC12-217ENST00000473348 WWC1Q8IX03 1113 aa16.45■□□□□ 0.22
TRAPPC12-217ENST00000473348 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
TRAPPC12-217ENST00000473348 UBR2Q8IWV8 1755 aa16.44■□□□□ 0.22
TRAPPC12-217ENST00000473348 CEMIPQ8WUJ3 1361 aa16.44■□□□□ 0.22
TRAPPC12-217ENST00000473348 PDE3BQ13370 1112 aa16.44■□□□□ 0.22
TRAPPC12-217ENST00000473348 NKX1-1Q15270 411 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC12-217ENST00000473348 MARCH10Q8NA82 808 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC12-217ENST00000473348 RNMTO43148 476 aaKnown RBP16.43■□□□□ 0.22
TRAPPC12-217ENST00000473348 IL17REQ8NFR9 667 aa16.43■□□□□ 0.22
TRAPPC12-217ENST00000473348 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
TRAPPC12-217ENST00000473348 LGR6Q9HBX8 967 aa16.43■□□□□ 0.22
TRAPPC12-217ENST00000473348 CALD1Q05682 793 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-217ENST00000473348 WDR63Q8IWG1 891 aa16.41■□□□□ 0.22
TRAPPC12-217ENST00000473348 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
TRAPPC12-217ENST00000473348 KRT27Q7Z3Y8 459 aa16.4■□□□□ 0.22
TRAPPC12-217ENST00000473348 IL16Q14005 1332 aa16.4■□□□□ 0.22
TRAPPC12-217ENST00000473348 BCL9O00512 1426 aa16.39■□□□□ 0.21
TRAPPC12-217ENST00000473348 TEFQ10587 303 aa16.39■□□□□ 0.21
TRAPPC12-217ENST00000473348 C5P01031 1676 aa16.39■□□□□ 0.21
TRAPPC12-217ENST00000473348 LAMB4A4D0S4 1761 aa16.38■□□□□ 0.21
TRAPPC12-217ENST00000473348 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms