RNA–Protein interactions for RNA: ENST00000473333.1

GTF2I-206, Transcript of general transcription factor IIi, humanhuman

TSL 3

Gene GTF2I, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-206ENST00000473333 Q6ZVU0 165 aa11.12□□□□□ -0.63
GTF2I-206ENST00000473333 HMX1Q9NP08 348 aaPredicted RBP11.12□□□□□ -0.63
GTF2I-206ENST00000473333 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
GTF2I-206ENST00000473333 BIVM-ERCC5R4GMW8 1640 aa11.11□□□□□ -0.63
GTF2I-206ENST00000473333 PTK2Q05397 1052 aa11.11□□□□□ -0.63
GTF2I-206ENST00000473333 INTS6LQ5JSJ4 861 aaKnown RBP11.11□□□□□ -0.63
GTF2I-206ENST00000473333 ADAM32Q8TC27 787 aa11.11□□□□□ -0.63
GTF2I-206ENST00000473333 GRIN2AQ12879 1464 aa11.11□□□□□ -0.63
GTF2I-206ENST00000473333 CEP170Q5SW79 1584 aa11.11□□□□□ -0.63
GTF2I-206ENST00000473333 ZC3H4Q9UPT8 1303 aaKnown RBP11.1□□□□□ -0.63
GTF2I-206ENST00000473333 AGBL1Q96MI9 1066 aa11.1□□□□□ -0.63
GTF2I-206ENST00000473333 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.09□□□□□ -0.63
GTF2I-206ENST00000473333 CDV3Q9UKY7 258 aaKnown RBP11.09□□□□□ -0.63
GTF2I-206ENST00000473333 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
GTF2I-206ENST00000473333 SHROOM2Q13796 1616 aa11.09□□□□□ -0.63
GTF2I-206ENST00000473333 SPINT1O43278 529 aa11.08□□□□□ -0.64
GTF2I-206ENST00000473333 USP17L8P0C7I0 530 aa11.08□□□□□ -0.64
GTF2I-206ENST00000473333 PTSQ03393 145 aa11.08□□□□□ -0.64
GTF2I-206ENST00000473333 BCANQ96GW7 911 aa11.08□□□□□ -0.64
GTF2I-206ENST00000473333 NUP160Q12769 1436 aa11.08□□□□□ -0.64
GTF2I-206ENST00000473333 RAB15P59190 212 aa11.07□□□□□ -0.64
GTF2I-206ENST00000473333 GPR161Q8N6U8 529 aaKnown RBP11.07□□□□□ -0.64
GTF2I-206ENST00000473333 TMPRSS4Q9NRS4 437 aa11.07□□□□□ -0.64
GTF2I-206ENST00000473333 GPSM3Q9Y4H4 160 aa11.07□□□□□ -0.64
GTF2I-206ENST00000473333 RFC5P40937 340 aa11.06□□□□□ -0.64
GTF2I-206ENST00000473333 RELBQ01201 579 aa11.06□□□□□ -0.64
GTF2I-206ENST00000473333 DHX9Q08211 1270 aaKnown RBP11.06□□□□□ -0.64
GTF2I-206ENST00000473333 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
GTF2I-206ENST00000473333 CTSOP43234 321 aaPredicted RBP11.05□□□□□ -0.64
GTF2I-206ENST00000473333 ZNF395Q9H8N7 513 aaPredicted RBP11.04□□□□□ -0.64
GTF2I-206ENST00000473333 FHAD1B1AJZ9 1412 aa11.03□□□□□ -0.64
GTF2I-206ENST00000473333 KRT76Q01546 638 aa11.03□□□□□ -0.64
GTF2I-206ENST00000473333 INSM2Q96T92 566 aaPredicted RBP11.03□□□□□ -0.64
GTF2I-206ENST00000473333 ERICH3Q5RHP9 1530 aa11.03□□□□□ -0.64
GTF2I-206ENST00000473333 DZIP3Q86Y13 1208 aaKnown RBP11.02□□□□□ -0.65
GTF2I-206ENST00000473333 CCDC155Q8N6L0 562 aa11.02□□□□□ -0.65
GTF2I-206ENST00000473333 ZNF784Q8NCA9 323 aaPredicted RBP11.02□□□□□ -0.65
GTF2I-206ENST00000473333 KIF13AQ9H1H9 1805 aa11.02□□□□□ -0.65
GTF2I-206ENST00000473333 ADD1P35611 737 aaKnown RBP11.01□□□□□ -0.65
GTF2I-206ENST00000473333 TRIM34Q9BYJ4 488 aa11.01□□□□□ -0.65
GTF2I-206ENST00000473333 ERVH48-1M5A8F1 160 aa11□□□□□ -0.65
GTF2I-206ENST00000473333 NBPF20Q3BBV1 942 aa11□□□□□ -0.65
GTF2I-206ENST00000473333 PNMA1Q8ND90 353 aa11□□□□□ -0.65
GTF2I-206ENST00000473333 SUPT5HO00267 1087 aaKnown RBP10.99□□□□□ -0.65
GTF2I-206ENST00000473333 LILRA1O75019 489 aa10.99□□□□□ -0.65
GTF2I-206ENST00000473333 CNTNAP3BQ96NU0 1288 aa10.99□□□□□ -0.65
GTF2I-206ENST00000473333 CNTNAP3Q9BZ76 1288 aa10.99□□□□□ -0.65
GTF2I-206ENST00000473333 POLMQ9NP87 494 aaPredicted RBP10.99□□□□□ -0.65
GTF2I-206ENST00000473333 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
GTF2I-206ENST00000473333 SLC35F4A4IF30 521 aa10.98□□□□□ -0.65
GTF2I-206ENST00000473333 KDF1Q8NAX2 398 aaPredicted RBP10.98□□□□□ -0.65
GTF2I-206ENST00000473333 IL27Q8NEV9 243 aa10.97□□□□□ -0.65
GTF2I-206ENST00000473333 PCMTD1Q96MG8 357 aaPredicted RBP10.97□□□□□ -0.65
GTF2I-206ENST00000473333 ESPNB1AK53 854 aa10.96□□□□□ -0.65
GTF2I-206ENST00000473333 RNF217Q8TC41 542 aa10.96□□□□□ -0.65
GTF2I-206ENST00000473333 NANOS1Q8WY41 292 aaKnown RBP10.96□□□□□ -0.65
GTF2I-206ENST00000473333 COL25A1Q9BXS0 654 aaPredicted RBP10.96□□□□□ -0.65
GTF2I-206ENST00000473333 ADH1AP07327 375 aa10.95□□□□□ -0.66
GTF2I-206ENST00000473333 VWA5B2Q8N398 1253 aa10.95□□□□□ -0.66
GTF2I-206ENST00000473333 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
GTF2I-206ENST00000473333 PRG4Q92954 1404 aaPredicted RBP10.94□□□□□ -0.66
GTF2I-206ENST00000473333 ITGA6P23229 1130 aa10.94□□□□□ -0.66
GTF2I-206ENST00000473333 PTGIRP43119 386 aa10.94□□□□□ -0.66
GTF2I-206ENST00000473333 TMEM259Q4ZIN3 620 aa10.94□□□□□ -0.66
GTF2I-206ENST00000473333 RNFT1Q5M7Z0 435 aa10.94□□□□□ -0.66
GTF2I-206ENST00000473333 CYLDQ9NQC7 956 aa10.94□□□□□ -0.66
GTF2I-206ENST00000473333 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
GTF2I-206ENST00000473333 NEUROD2Q15784 382 aa10.93□□□□□ -0.66
GTF2I-206ENST00000473333 FOXD4L5Q5VV16 416 aaPredicted RBP10.93□□□□□ -0.66
GTF2I-206ENST00000473333 CDC14CA4D256 554 aa10.92□□□□□ -0.66
GTF2I-206ENST00000473333 GJD4Q96KN9 370 aaPredicted RBP10.92□□□□□ -0.66
GTF2I-206ENST00000473333 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
GTF2I-206ENST00000473333 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
GTF2I-206ENST00000473333 MAPKBP1O60336 1514 aa10.9□□□□□ -0.66
GTF2I-206ENST00000473333 ZBBXA8MT70 800 aa10.9□□□□□ -0.66
GTF2I-206ENST00000473333 FBXO45P0C2W1 286 aa10.9□□□□□ -0.66
GTF2I-206ENST00000473333 ADCY10Q96PN6 1610 aa10.9□□□□□ -0.66
GTF2I-206ENST00000473333 DIP2BQ9P265 1576 aa10.9□□□□□ -0.67
GTF2I-206ENST00000473333 SV2AQ7L0J3 742 aa10.89□□□□□ -0.67
GTF2I-206ENST00000473333 ABCC10Q5T3U5 1492 aa10.88□□□□□ -0.67
GTF2I-206ENST00000473333 CUL7Q14999 1698 aa10.88□□□□□ -0.67
GTF2I-206ENST00000473333 GSK3AP49840 483 aa10.87□□□□□ -0.67
GTF2I-206ENST00000473333 PRICKLE2Q7Z3G6 844 aa10.87□□□□□ -0.67
GTF2I-206ENST00000473333 SEPT12Q8IYM1 358 aa10.87□□□□□ -0.67
GTF2I-206ENST00000473333 WHAMMQ8TF30 809 aa10.87□□□□□ -0.67
GTF2I-206ENST00000473333 ADAMTS8Q9UP79 889 aa10.87□□□□□ -0.67
GTF2I-206ENST00000473333 RHOQP17081 205 aa10.86□□□□□ -0.67
GTF2I-206ENST00000473333 ZNF385CQ66K41 422 aaPredicted RBP10.86□□□□□ -0.67
GTF2I-206ENST00000473333 LYSMD3Q7Z3D4 306 aa10.86□□□□□ -0.67
GTF2I-206ENST00000473333 CUEDC1Q9NWM3 386 aaPredicted RBP10.86□□□□□ -0.67
GTF2I-206ENST00000473333 KIAA0586Q9BVV6 1533 aa10.84□□□□□ -0.67
GTF2I-206ENST00000473333 KCNMA1Q12791 1236 aa10.84□□□□□ -0.67
GTF2I-206ENST00000473333 SLC24A1O60721 1099 aa10.83□□□□□ -0.68
GTF2I-206ENST00000473333 RNF144AP50876 292 aaPredicted RBP10.83□□□□□ -0.68
GTF2I-206ENST00000473333 ATP5J2-PTCD1G3V325 749 aa10.82□□□□□ -0.68
GTF2I-206ENST00000473333 BRPF1P55201 1214 aaPredicted RBP10.82□□□□□ -0.68
GTF2I-206ENST00000473333 SVOPQ8N4V2 548 aa10.82□□□□□ -0.68
GTF2I-206ENST00000473333 KDM6BO15054 1643 aa10.82□□□□□ -0.68
GTF2I-206ENST00000473333 TSPOAP1O95153 1857 aa10.82□□□□□ -0.68
GTF2I-206ENST00000473333 A0A1W2PRU2 124 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms