RNA–Protein interactions for RNA: ENST00000473333.1

GTF2I-206, Transcript of general transcription factor IIi, humanhuman

TSL 3

Gene GTF2I, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-206ENST00000473333 AEBP2Q6ZN18 517 aaPredicted RBP32.61■■■□□ 2.81
GTF2I-206ENST00000473333 CHIC1Q5VXU3 224 aa31.01■■■□□ 2.55
GTF2I-206ENST00000473333 SENP3Q9H4L4 574 aaPredicted RBP27.68■■■□□ 2.02
GTF2I-206ENST00000473333 PHF23Q9BUL5 403 aaPredicted RBP27.42■■□□□ 1.98
GTF2I-206ENST00000473333 FOXD1Q16676 465 aa25.87■■□□□ 1.73
GTF2I-206ENST00000473333 PLPPR3Q6T4P5 718 aa24.8■■□□□ 1.56
GTF2I-206ENST00000473333 PPP6R1Q9UPN7 881 aa24.34■■□□□ 1.49
GTF2I-206ENST00000473333 ADRA2BP18089 450 aa24.26■■□□□ 1.47
GTF2I-206ENST00000473333 PIAS4Q8N2W9 510 aaPredicted RBP24.18■■□□□ 1.46
GTF2I-206ENST00000473333 MSH5O43196 834 aa24.07■■□□□ 1.44
GTF2I-206ENST00000473333 POTEDQ86YR6 584 aa23.37■■□□□ 1.33
GTF2I-206ENST00000473333 MAPK8IP2Q13387 824 aaPredicted RBP22.28■■□□□ 1.16
GTF2I-206ENST00000473333 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
GTF2I-206ENST00000473333 DMRT2Q9Y5R5 561 aa21.99■■□□□ 1.11
GTF2I-206ENST00000473333 PPP4R3CPQ6ZMV5 832 aa21.8■■□□□ 1.08
GTF2I-206ENST00000473333 CNKSR2Q8WXI2 1034 aa21.33■■□□□ 1.01
GTF2I-206ENST00000473333 HOXD11P31277 338 aaPredicted RBP21.23■□□□□ 0.99
GTF2I-206ENST00000473333 DCAF8L1A6NGE4 600 aa21.15■□□□□ 0.98
GTF2I-206ENST00000473333 RNF216Q9NWF9 866 aaPredicted RBP21.09■□□□□ 0.97
GTF2I-206ENST00000473333 NCBP3Q53F19 620 aaKnown RBP20.94■□□□□ 0.94
GTF2I-206ENST00000473333 NPM3O75607 178 aaKnown RBP20.7■□□□□ 0.9
GTF2I-206ENST00000473333 CACNB1Q02641 598 aaPredicted RBP20.65■□□□□ 0.9
GTF2I-206ENST00000473333 RNF39Q9H2S5 420 aa20.6■□□□□ 0.89
GTF2I-206ENST00000473333 KCNA4P22459 653 aa20.45■□□□□ 0.86
GTF2I-206ENST00000473333 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
GTF2I-206ENST00000473333 C1QBPQ07021 282 aaKnown RBP20.26■□□□□ 0.83
GTF2I-206ENST00000473333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.25■□□□□ 0.83
GTF2I-206ENST00000473333 U3KPZ7 1027 aaPredicted RBP19.86■□□□□ 0.77
GTF2I-206ENST00000473333 SLC4A2P04920 1241 aa19.77■□□□□ 0.76
GTF2I-206ENST00000473333 SPINK5Q9NQ38 1064 aaPredicted RBP19.57■□□□□ 0.72
GTF2I-206ENST00000473333 CAPN15O75808 1086 aa19.49■□□□□ 0.71
GTF2I-206ENST00000473333 DSG3P32926 999 aa19.34■□□□□ 0.69
GTF2I-206ENST00000473333 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
GTF2I-206ENST00000473333 TRHP20396 242 aaPredicted RBP19.24■□□□□ 0.67
GTF2I-206ENST00000473333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
GTF2I-206ENST00000473333 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
GTF2I-206ENST00000473333 APLP2Q06481 763 aa19.18■□□□□ 0.66
GTF2I-206ENST00000473333 SAMD1Q6SPF0 538 aaPredicted RBP19.16■□□□□ 0.66
GTF2I-206ENST00000473333 ZNF219Q9P2Y4 722 aaPredicted RBP19.11■□□□□ 0.65
GTF2I-206ENST00000473333 ABCB7O75027 752 aa19.1■□□□□ 0.65
GTF2I-206ENST00000473333 MYCNP04198 464 aaPredicted RBP19.09■□□□□ 0.65
GTF2I-206ENST00000473333 FOXD4L1Q9NU39 408 aa18.97■□□□□ 0.63
GTF2I-206ENST00000473333 ZBTB22O15209 634 aa18.82■□□□□ 0.6
GTF2I-206ENST00000473333 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
GTF2I-206ENST00000473333 POLA2Q14181 598 aa18.74■□□□□ 0.59
GTF2I-206ENST00000473333 RBM42Q9BTD8 480 aaKnown RBP18.37■□□□□ 0.53
GTF2I-206ENST00000473333 ATXN8OSP0DMR3 200 aa18.34■□□□□ 0.53
GTF2I-206ENST00000473333 POTEHQ6S545 545 aa18.33■□□□□ 0.52
GTF2I-206ENST00000473333 ZBTB12Q9Y330 459 aaPredicted RBP18.24■□□□□ 0.51
GTF2I-206ENST00000473333 OSCARQ8IYS5 282 aa18.12■□□□□ 0.49
GTF2I-206ENST00000473333 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
GTF2I-206ENST00000473333 AKT1S1Q96B36 256 aa18.01■□□□□ 0.47
GTF2I-206ENST00000473333 CHRDL2Q6WN34 429 aa17.99■□□□□ 0.47
GTF2I-206ENST00000473333 FBLN2P98095 1184 aa17.9■□□□□ 0.46
GTF2I-206ENST00000473333 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
GTF2I-206ENST00000473333 REM2Q8IYK8 340 aaPredicted RBP17.89■□□□□ 0.45
GTF2I-206ENST00000473333 MKRN4PQ13434 485 aaPredicted RBP17.87■□□□□ 0.45
GTF2I-206ENST00000473333 SPDYE2BA6NHP3 402 aa17.74■□□□□ 0.43
GTF2I-206ENST00000473333 SPDYE6P0CI01 402 aa17.74■□□□□ 0.43
GTF2I-206ENST00000473333 SPDYE2Q495Y8 402 aa17.74■□□□□ 0.43
GTF2I-206ENST00000473333 PITPNM1O00562 1244 aa17.7■□□□□ 0.42
GTF2I-206ENST00000473333 PIP4P2Q8N4L2 257 aa17.61■□□□□ 0.41
GTF2I-206ENST00000473333 ZNF692Q9BU19 519 aaPredicted RBP17.6■□□□□ 0.41
GTF2I-206ENST00000473333 SSUH2Q9Y2M2 353 aa17.54■□□□□ 0.4
GTF2I-206ENST00000473333 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
GTF2I-206ENST00000473333 CLEC11AQ9Y240 323 aa17.44■□□□□ 0.38
GTF2I-206ENST00000473333 SPDYE1Q8NFV5 336 aaPredicted RBP17.41■□□□□ 0.38
GTF2I-206ENST00000473333 PABPN1Q86U42 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
GTF2I-206ENST00000473333 HAX1O00165 279 aa17.27■□□□□ 0.36
GTF2I-206ENST00000473333 PRKAR2AP13861 404 aaKnown RBP17.24■□□□□ 0.35
GTF2I-206ENST00000473333 SP7Q8TDD2 431 aaPredicted RBP17.22■□□□□ 0.35
GTF2I-206ENST00000473333 PRR29P0C7W0 189 aa17.14■□□□□ 0.33
GTF2I-206ENST00000473333 EVX2Q03828 476 aa17.13■□□□□ 0.33
GTF2I-206ENST00000473333 CHADLQ6NUI6 762 aa17.13■□□□□ 0.33
GTF2I-206ENST00000473333 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
GTF2I-206ENST00000473333 C19orf67A6NJJ6 358 aa16.94■□□□□ 0.3
GTF2I-206ENST00000473333 FARP1Q9Y4F1 1045 aaPredicted RBP16.83■□□□□ 0.28
GTF2I-206ENST00000473333 STAG3Q9UJ98 1225 aa16.82■□□□□ 0.28
GTF2I-206ENST00000473333 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
GTF2I-206ENST00000473333 GABBR2O75899 941 aa16.69■□□□□ 0.26
GTF2I-206ENST00000473333 CD44P16070 742 aaKnown RBP16.69■□□□□ 0.26
GTF2I-206ENST00000473333 PROM2Q8N271 834 aa16.62■□□□□ 0.25
GTF2I-206ENST00000473333 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
GTF2I-206ENST00000473333 ZRANB1Q9UGI0 708 aa16.49■□□□□ 0.23
GTF2I-206ENST00000473333 ZNF579Q8NAF0 562 aaKnown RBP16.41■□□□□ 0.22
GTF2I-206ENST00000473333 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
GTF2I-206ENST00000473333 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
GTF2I-206ENST00000473333 FKBP8Q14318 412 aa16.35■□□□□ 0.21
GTF2I-206ENST00000473333 CLCN6P51797 869 aa16.33■□□□□ 0.2
GTF2I-206ENST00000473333 PAK3O75914 559 aaPredicted RBP16.32■□□□□ 0.2
GTF2I-206ENST00000473333 PHF12Q96QT6 1004 aa16.31■□□□□ 0.2
GTF2I-206ENST00000473333 MIER1Q8N108 512 aa16.28■□□□□ 0.2
GTF2I-206ENST00000473333 GALR2O43603 387 aaPredicted RBP16.27■□□□□ 0.2
GTF2I-206ENST00000473333 DCBLD2Q96PD2 775 aa16.24■□□□□ 0.19
GTF2I-206ENST00000473333 TSPYL2Q9H2G4 693 aaPredicted RBP16.19■□□□□ 0.18
GTF2I-206ENST00000473333 LHX8Q68G74 356 aa16.18■□□□□ 0.18
GTF2I-206ENST00000473333 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
GTF2I-206ENST00000473333 PLCD3Q8N3E9 789 aa16.14■□□□□ 0.17
GTF2I-206ENST00000473333 RASEFQ8IZ41 740 aa16.07■□□□□ 0.16
GTF2I-206ENST00000473333 MS4A3Q96HJ5 214 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms