RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 CBLBQ13191 982 aa10.09□□□□□ -0.79
GPNMB-208ENST00000470994 SV2AQ7L0J3 742 aa10.09□□□□□ -0.79
GPNMB-208ENST00000470994 KCTD15Q96SI1 283 aaPredicted RBP10.09□□□□□ -0.79
GPNMB-208ENST00000470994 CDC14CA4D256 554 aa10.08□□□□□ -0.8
GPNMB-208ENST00000470994 RTL5Q5HYW3 569 aaPredicted RBP10.08□□□□□ -0.8
GPNMB-208ENST00000470994 ZNF385CQ66K41 422 aaPredicted RBP10.08□□□□□ -0.8
GPNMB-208ENST00000470994 ZBTB33Q86T24 672 aa10.08□□□□□ -0.8
GPNMB-208ENST00000470994 ZC3H4Q9UPT8 1303 aaKnown RBP10.07□□□□□ -0.8
GPNMB-208ENST00000470994 SLC35F4A4IF30 521 aa10.07□□□□□ -0.8
GPNMB-208ENST00000470994 PDE4DQ08499 809 aa10.07□□□□□ -0.8
GPNMB-208ENST00000470994 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
GPNMB-208ENST00000470994 FHAD1B1AJZ9 1412 aa10.07□□□□□ -0.8
GPNMB-208ENST00000470994 GRIN2AQ12879 1464 aa10.06□□□□□ -0.8
GPNMB-208ENST00000470994 SLURP2P0DP57 97 aa10.06□□□□□ -0.8
GPNMB-208ENST00000470994 MARSP56192 900 aaKnown RBP10.06□□□□□ -0.8
GPNMB-208ENST00000470994 FKBPLQ9UIM3 349 aa10.06□□□□□ -0.8
GPNMB-208ENST00000470994 IGHA1P01876 353 aa10.05□□□□□ -0.8
GPNMB-208ENST00000470994 RNFT1Q5M7Z0 435 aa10.05□□□□□ -0.8
GPNMB-208ENST00000470994 KANK3Q6NY19 840 aa10.05□□□□□ -0.8
GPNMB-208ENST00000470994 VWA5B2Q8N398 1253 aa10.05□□□□□ -0.8
GPNMB-208ENST00000470994 POLMQ9NP87 494 aaPredicted RBP10.05□□□□□ -0.8
GPNMB-208ENST00000470994 FOXK2Q01167 660 aa10.04□□□□□ -0.8
GPNMB-208ENST00000470994 SCARF2Q96GP6 870 aaPredicted RBP10.04□□□□□ -0.8
GPNMB-208ENST00000470994 TTBK1Q5TCY1 1321 aaPredicted RBP10.04□□□□□ -0.8
GPNMB-208ENST00000470994 IRS1P35568 1242 aa10.03□□□□□ -0.8
GPNMB-208ENST00000470994 RELBQ01201 579 aa10.03□□□□□ -0.8
GPNMB-208ENST00000470994 NUP160Q12769 1436 aa10.03□□□□□ -0.8
GPNMB-208ENST00000470994 NBPF20Q3BBV1 942 aa10.03□□□□□ -0.8
GPNMB-208ENST00000470994 PRG4Q92954 1404 aaPredicted RBP10.02□□□□□ -0.81
GPNMB-208ENST00000470994 CTSOP43234 321 aaPredicted RBP10.02□□□□□ -0.81
GPNMB-208ENST00000470994 MAP3K10Q02779 954 aa10.02□□□□□ -0.81
GPNMB-208ENST00000470994 PTK2Q05397 1052 aa10.02□□□□□ -0.81
GPNMB-208ENST00000470994 PNMA1Q8ND90 353 aa10.02□□□□□ -0.81
GPNMB-208ENST00000470994 TRIM52Q96A61 297 aa10.02□□□□□ -0.81
GPNMB-208ENST00000470994 INSM2Q96T92 566 aaPredicted RBP10.02□□□□□ -0.81
GPNMB-208ENST00000470994 ABCA5Q8WWZ7 1642 aa10.02□□□□□ -0.81
GPNMB-208ENST00000470994 CTDSPL2Q05D32 466 aa10.01□□□□□ -0.81
GPNMB-208ENST00000470994 INTS6LQ5JSJ4 861 aaKnown RBP10.01□□□□□ -0.81
GPNMB-208ENST00000470994 GPAT2Q6NUI2 795 aa10.01□□□□□ -0.81
GPNMB-208ENST00000470994 AGBL1Q96MI9 1066 aa10.01□□□□□ -0.81
GPNMB-208ENST00000470994 GPSM3Q9Y4H4 160 aa10.01□□□□□ -0.81
GPNMB-208ENST00000470994 ERCC6L2Q5T890 1561 aa10.01□□□□□ -0.81
GPNMB-208ENST00000470994 ARHGEF15O94989 841 aa10□□□□□ -0.81
GPNMB-208ENST00000470994 FAM69CQ0P6D2 419 aa10□□□□□ -0.81
GPNMB-208ENST00000470994 RNF217Q8TC41 542 aa10□□□□□ -0.81
GPNMB-208ENST00000470994 POLR3EQ9NVU0 708 aa10□□□□□ -0.81
GPNMB-208ENST00000470994 PBRM1Q86U86 1689 aa9.99□□□□□ -0.81
GPNMB-208ENST00000470994 WHAMMQ8TF30 809 aa9.99□□□□□ -0.81
GPNMB-208ENST00000470994 TOP2BQ02880 1626 aa9.99□□□□□ -0.81
GPNMB-208ENST00000470994 CEP170Q5SW79 1584 aa9.98□□□□□ -0.81
GPNMB-208ENST00000470994 ADAMTS2O95450 1211 aa9.98□□□□□ -0.81
GPNMB-208ENST00000470994 ENAMQ9NRM1 1142 aa9.98□□□□□ -0.81
GPNMB-208ENST00000470994 ADAMTS12P58397 1594 aa9.97□□□□□ -0.81
GPNMB-208ENST00000470994 SRSF11Q05519 484 aaKnown RBP9.97□□□□□ -0.81
GPNMB-208ENST00000470994 ZNF395Q9H8N7 513 aaPredicted RBP9.97□□□□□ -0.81
GPNMB-208ENST00000470994 IGF1RP08069 1367 aa9.97□□□□□ -0.81
GPNMB-208ENST00000470994 ERICH3Q5RHP9 1530 aa9.97□□□□□ -0.81
GPNMB-208ENST00000470994 ADH1AP07327 375 aa9.96□□□□□ -0.82
GPNMB-208ENST00000470994 LRRN4Q8WUT4 740 aa9.96□□□□□ -0.82
GPNMB-208ENST00000470994 NR6A1Q15406 480 aa9.95□□□□□ -0.82
GPNMB-208ENST00000470994 ADAM32Q8TC27 787 aa9.95□□□□□ -0.82
GPNMB-208ENST00000470994 KIF27Q86VH2 1401 aa9.94□□□□□ -0.82
GPNMB-208ENST00000470994 SENP3-EIF4A1A0A087X0R7 540 aa9.94□□□□□ -0.82
GPNMB-208ENST00000470994 LYSMD3Q7Z3D4 306 aa9.94□□□□□ -0.82
GPNMB-208ENST00000470994 ZNF784Q8NCA9 323 aaPredicted RBP9.94□□□□□ -0.82
GPNMB-208ENST00000470994 BIVM-ERCC5R4GMW8 1640 aa9.93□□□□□ -0.82
GPNMB-208ENST00000470994 RAB15P59190 212 aa9.93□□□□□ -0.82
GPNMB-208ENST00000470994 FOXR1Q6PIV2 292 aa9.93□□□□□ -0.82
GPNMB-208ENST00000470994 ATP1B4Q9UN42 357 aaPredicted RBP9.93□□□□□ -0.82
GPNMB-208ENST00000470994 PTGIRP43119 386 aa9.92□□□□□ -0.82
GPNMB-208ENST00000470994 DZIP3Q86Y13 1208 aaKnown RBP9.92□□□□□ -0.82
GPNMB-208ENST00000470994 GMCL1Q96IK5 515 aa9.92□□□□□ -0.82
GPNMB-208ENST00000470994 CARMIL1Q5VZK9 1371 aa9.91□□□□□ -0.82
GPNMB-208ENST00000470994 PHF20L1A8MW92 1017 aa9.91□□□□□ -0.82
GPNMB-208ENST00000470994 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
GPNMB-208ENST00000470994 LYPD4Q6UWN0 246 aa9.91□□□□□ -0.82
GPNMB-208ENST00000470994 TMPRSS4Q9NRS4 437 aa9.91□□□□□ -0.82
GPNMB-208ENST00000470994 SKIV2LQ15477 1246 aaKnown RBP9.9□□□□□ -0.82
GPNMB-208ENST00000470994 SLC24A3Q9HC58 644 aa9.9□□□□□ -0.82
GPNMB-208ENST00000470994 PTPRGP23470 1445 aa9.9□□□□□ -0.83
GPNMB-208ENST00000470994 KIAA0586Q9BVV6 1533 aa9.89□□□□□ -0.83
GPNMB-208ENST00000470994 CELA2BP08218 269 aaPredicted RBP9.89□□□□□ -0.83
GPNMB-208ENST00000470994 PPP2R2DQ66LE6 453 aa9.89□□□□□ -0.83
GPNMB-208ENST00000470994 PODNQ7Z5L7 613 aa9.89□□□□□ -0.83
GPNMB-208ENST00000470994 OCSTAMPQ9BR26 566 aa9.89□□□□□ -0.83
GPNMB-208ENST00000470994 ERVH48-1M5A8F1 160 aa9.88□□□□□ -0.83
GPNMB-208ENST00000470994 SEPT12Q8IYM1 358 aa9.88□□□□□ -0.83
GPNMB-208ENST00000470994 MBIPQ9NS73 344 aa9.88□□□□□ -0.83
GPNMB-208ENST00000470994 SHROOM2Q13796 1616 aa9.87□□□□□ -0.83
GPNMB-208ENST00000470994 LILRA1O75019 489 aa9.87□□□□□ -0.83
GPNMB-208ENST00000470994 AP1G2O75843 785 aa9.87□□□□□ -0.83
GPNMB-208ENST00000470994 GAS6Q14393 721 aa9.87□□□□□ -0.83
GPNMB-208ENST00000470994 SH3D19Q5HYK7 790 aa9.87□□□□□ -0.83
GPNMB-208ENST00000470994 RNF144AP50876 292 aaPredicted RBP9.86□□□□□ -0.83
GPNMB-208ENST00000470994 TRIM22Q8IYM9 498 aa9.86□□□□□ -0.83
GPNMB-208ENST00000470994 MSTNO14793 375 aa9.85□□□□□ -0.83
GPNMB-208ENST00000470994 PRICKLE2Q7Z3G6 844 aa9.85□□□□□ -0.83
GPNMB-208ENST00000470994 BEND7Q8N7W2 519 aaPredicted RBP9.85□□□□□ -0.83
GPNMB-208ENST00000470994 ZNF837Q96EG3 531 aaPredicted RBP9.85□□□□□ -0.83
GPNMB-208ENST00000470994 ABCC10Q5T3U5 1492 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms