RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 SMARCA5O60264 1052 aaPredicted RBP6.44□□□□□ -1.38
COL3A1-205ENST00000470167 LIG1P18858 919 aa6.44□□□□□ -1.38
COL3A1-205ENST00000470167 LMOD3Q0VAK6 560 aa6.44□□□□□ -1.38
COL3A1-205ENST00000470167 ZNF513Q8N8E2 541 aaPredicted RBP6.44□□□□□ -1.38
COL3A1-205ENST00000470167 CXorf38Q8TB03 319 aa6.44□□□□□ -1.38
COL3A1-205ENST00000470167 RNF217Q8TC41 542 aa6.44□□□□□ -1.38
COL3A1-205ENST00000470167 LRRN4Q8WUT4 740 aa6.44□□□□□ -1.38
COL3A1-205ENST00000470167 CCDC97Q96F63 343 aaPredicted RBP6.44□□□□□ -1.38
COL3A1-205ENST00000470167 BORCS6Q96GS4 357 aa6.44□□□□□ -1.38
COL3A1-205ENST00000470167 PRM3Q9NNZ6 103 aa6.44□□□□□ -1.38
COL3A1-205ENST00000470167 RRAGDQ9NQL2 400 aaPredicted RBP6.44□□□□□ -1.38
COL3A1-205ENST00000470167 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.44□□□□□ -1.38
COL3A1-205ENST00000470167 NDUFB9Q9Y6M9 179 aa6.44□□□□□ -1.38
COL3A1-205ENST00000470167 HRO43593 1189 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 GPR37L1O60883 481 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 RGL3Q3MIN7 710 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 LONRF3Q496Y0 759 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 MORN1Q5T089 497 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 SPNS2Q8IVW8 549 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 TRIM34Q9BYJ4 488 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 TSPYL1Q9H0U9 437 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 EFCC1Q9HA90 598 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 CEP83Q9Y592 693 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 MRVI1Q9Y6F6 885 aa6.43□□□□□ -1.38
COL3A1-205ENST00000470167 ACTN4O43707 911 aaKnown RBP6.42□□□□□ -1.38
COL3A1-205ENST00000470167 ZSCAN20P17040 1043 aaPredicted RBP6.42□□□□□ -1.38
COL3A1-205ENST00000470167 MMRN1Q13201 1228 aa6.42□□□□□ -1.38
COL3A1-205ENST00000470167 ZNF280DQ6N043 979 aa6.42□□□□□ -1.38
COL3A1-205ENST00000470167 PRR7Q8TB68 274 aa6.42□□□□□ -1.38
COL3A1-205ENST00000470167 IGSF5Q9NSI5 407 aa6.42□□□□□ -1.38
COL3A1-205ENST00000470167 DHX16O60231 1041 aaKnown RBP6.41□□□□□ -1.38
COL3A1-205ENST00000470167 PPFIA4O75335 1185 aa6.41□□□□□ -1.38
COL3A1-205ENST00000470167 BCAMP50895 628 aa6.41□□□□□ -1.38
COL3A1-205ENST00000470167 IRF5Q13568 498 aa6.41□□□□□ -1.38
COL3A1-205ENST00000470167 ZRSR2Q15696 482 aaKnown RBP6.41□□□□□ -1.38
COL3A1-205ENST00000470167 ANKRD13DQ6ZTN6 518 aa6.41□□□□□ -1.38
COL3A1-205ENST00000470167 ANKK1Q8NFD2 765 aa6.41□□□□□ -1.38
COL3A1-205ENST00000470167 EPS8L1Q8TE68 723 aa6.41□□□□□ -1.38
COL3A1-205ENST00000470167 EVI5LQ96CN4 794 aa6.41□□□□□ -1.38
COL3A1-205ENST00000470167 IPO9Q96P70 1041 aaKnown RBP6.41□□□□□ -1.38
COL3A1-205ENST00000470167 MAGEC2Q9UBF1 373 aaPredicted RBP6.41□□□□□ -1.38
COL3A1-205ENST00000470167 SERPINA10Q9UK55 444 aa6.41□□□□□ -1.38
COL3A1-205ENST00000470167 SLC27A5Q9Y2P5 690 aa6.41□□□□□ -1.38
COL3A1-205ENST00000470167 LMTK3Q96Q04 1460 aa6.41□□□□□ -1.38
COL3A1-205ENST00000470167 GOLGA8CPA6NN73 597 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 PER1O15534 1290 aaPredicted RBP6.4□□□□□ -1.38
COL3A1-205ENST00000470167 COQ9O75208 318 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 RHBDL3P58872 404 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 WDR78Q5VTH9 848 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 BLOC1S3Q6QNY0 202 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 RNF19BQ6ZMZ0 732 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 RETREG3Q86VR2 466 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 GLMNQ92990 594 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 SYNPO2Q9UMS6 1093 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 HPS5Q9UPZ3 1129 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 AMOTL2Q9Y2J4 779 aa6.4□□□□□ -1.38
COL3A1-205ENST00000470167 SOWAHBA6NEL2 793 aa6.39□□□□□ -1.39
COL3A1-205ENST00000470167 APLP1P51693 650 aa6.39□□□□□ -1.39
COL3A1-205ENST00000470167 CDC37Q16543 378 aaPredicted RBP6.39□□□□□ -1.39
COL3A1-205ENST00000470167 CLEC4GQ6UXB4 293 aa6.39□□□□□ -1.39
COL3A1-205ENST00000470167 CALR3Q96L12 384 aaKnown RBP6.39□□□□□ -1.39
COL3A1-205ENST00000470167 SMC3Q9UQE7 1217 aa6.39□□□□□ -1.39
COL3A1-205ENST00000470167 FRMD4BQ9Y2L6 1034 aa6.39□□□□□ -1.39
COL3A1-205ENST00000470167 EPB41L2O43491 1005 aaKnown RBP6.38□□□□□ -1.39
COL3A1-205ENST00000470167 NEFHP12036 1026 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 CD151P48509 253 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 PPP4CP60510 307 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 NR6A1Q15406 480 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 Q3C1V9 767 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 ZC3H12AQ5D1E8 599 aaKnown RBP6.38□□□□□ -1.39
COL3A1-205ENST00000470167 CCDC181Q5TID7 509 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 ZKSCAN2Q63HK3 967 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 LSM14AQ8ND56 463 aaKnown RBP6.38□□□□□ -1.39
COL3A1-205ENST00000470167 WNT2BQ93097 391 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 PAIP2Q9BPZ3 127 aaKnown RBP6.38□□□□□ -1.39
COL3A1-205ENST00000470167 CCDC94Q9BW85 323 aaPredicted RBP6.38□□□□□ -1.39
COL3A1-205ENST00000470167 PRR14Q9BWN1 585 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 JADE2Q9NQC1 790 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 STK26Q9P289 416 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 ANAPC4Q9UJX5 808 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 KIF16BQ96L93 1317 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 SYNRGQ9UMZ2 1314 aa6.38□□□□□ -1.39
COL3A1-205ENST00000470167 RPGRIP1LQ68CZ1 1315 aa6.37□□□□□ -1.39
COL3A1-205ENST00000470167 IPO8O15397 1037 aaKnown RBP6.37□□□□□ -1.39
COL3A1-205ENST00000470167 KIF1CO43896 1103 aaKnown RBP6.37□□□□□ -1.39
COL3A1-205ENST00000470167 CCDC172P0C7W6 258 aa6.37□□□□□ -1.39
COL3A1-205ENST00000470167 VAC14Q08AM6 782 aa6.37□□□□□ -1.39
COL3A1-205ENST00000470167 C1QTNF12Q5T7M4 302 aa6.37□□□□□ -1.39
COL3A1-205ENST00000470167 GET4Q7L5D6 327 aaPredicted RBP6.37□□□□□ -1.39
COL3A1-205ENST00000470167 ADAMTS19Q8TE59 1207 aa6.37□□□□□ -1.39
COL3A1-205ENST00000470167 MORC4Q8TE76 937 aa6.37□□□□□ -1.39
COL3A1-205ENST00000470167 MYCBPQ99417 103 aaPredicted RBP6.37□□□□□ -1.39
COL3A1-205ENST00000470167 MAF1Q9H063 256 aa6.37□□□□□ -1.39
COL3A1-205ENST00000470167 KLHL33A6NCF5 533 aa6.36□□□□□ -1.39
COL3A1-205ENST00000470167 FAM200BP0CF97 657 aa6.36□□□□□ -1.39
COL3A1-205ENST00000470167 HDGFL1Q5TGJ6 251 aa6.36□□□□□ -1.39
COL3A1-205ENST00000470167 SMC5Q8IY18 1101 aa6.36□□□□□ -1.39
COL3A1-205ENST00000470167 ATL2Q8NHH9 583 aa6.36□□□□□ -1.39
COL3A1-205ENST00000470167 ZCRB1Q8TBF4 217 aaKnown RBP6.36□□□□□ -1.39
COL3A1-205ENST00000470167 CCDC85AQ96PX6 553 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms