RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 U2AF1Q01081 240 aaKnown RBP eCLIP25.49■■□□□ 1.67
PCCB-208ENST00000468777 FAM182BQ5T319 152 aa25.49■■□□□ 1.67
PCCB-208ENST00000468777 OVOS2A0A0G2JMS6 1433 aa25.49■■□□□ 1.67
PCCB-208ENST00000468777 TATP17735 454 aaPredicted RBP25.49■■□□□ 1.67
PCCB-208ENST00000468777 TNS2Q63HR2 1409 aa25.47■■□□□ 1.67
PCCB-208ENST00000468777 EXOC5O00471 708 aa25.47■■□□□ 1.67
PCCB-208ENST00000468777 PDE3BQ13370 1112 aa25.46■■□□□ 1.67
PCCB-208ENST00000468777 KRT27Q7Z3Y8 459 aa25.46■■□□□ 1.67
PCCB-208ENST00000468777 SHANK3Q9BYB0 1731 aa25.46■■□□□ 1.67
PCCB-208ENST00000468777 MRS2Q9HD23 443 aa25.45■■□□□ 1.66
PCCB-208ENST00000468777 ZCRB1Q8TBF4 217 aaKnown RBP25.44■■□□□ 1.66
PCCB-208ENST00000468777 PKD1L3Q7Z443 1732 aa25.43■■□□□ 1.66
PCCB-208ENST00000468777 DDX54Q8TDD1 881 aaKnown RBP25.43■■□□□ 1.66
PCCB-208ENST00000468777 MARCH10Q8NA82 808 aaPredicted RBP25.42■■□□□ 1.66
PCCB-208ENST00000468777 RSPH6AQ9H0K4 717 aa25.42■■□□□ 1.66
PCCB-208ENST00000468777 PRKAR2BP31323 418 aa25.4■■□□□ 1.66
PCCB-208ENST00000468777 CCER2I3L3R5 266 aa25.4■■□□□ 1.66
PCCB-208ENST00000468777 WDR43Q15061 677 aaKnown RBP eCLIP25.39■■□□□ 1.66
PCCB-208ENST00000468777 YTHDC1Q96MU7 727 aaKnown RBP25.39■■□□□ 1.66
PCCB-208ENST00000468777 CYP27B1O15528 508 aa25.37■■□□□ 1.65
PCCB-208ENST00000468777 FCHSD2O94868 740 aa25.37■■□□□ 1.65
PCCB-208ENST00000468777 ADAMTS8Q9UP79 889 aa25.37■■□□□ 1.65
PCCB-208ENST00000468777 SPG7Q9UQ90 795 aa25.37■■□□□ 1.65
PCCB-208ENST00000468777 PHACTR3Q96KR7 559 aa25.36■■□□□ 1.65
PCCB-208ENST00000468777 PCDH11XQ9BZA7 1347 aa25.36■■□□□ 1.65
PCCB-208ENST00000468777 PCDH11YQ9BZA8 1340 aa25.36■■□□□ 1.65
PCCB-208ENST00000468777 PLEKHO1Q53GL0 409 aaPredicted RBP25.36■■□□□ 1.65
PCCB-208ENST00000468777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.35■■□□□ 1.65
PCCB-208ENST00000468777 KAT6BQ8WYB5 2073 aa25.34■■□□□ 1.65
PCCB-208ENST00000468777 ZNF530Q6P9A1 599 aaPredicted RBP25.34■■□□□ 1.65
PCCB-208ENST00000468777 MTHFSDQ2M296 383 aaKnown RBP25.33■■□□□ 1.65
PCCB-208ENST00000468777 AMOTQ4VCS5 1084 aa25.33■■□□□ 1.65
PCCB-208ENST00000468777 CCDC146Q8IYE0 955 aa25.33■■□□□ 1.65
PCCB-208ENST00000468777 PNISRQ8TF01 805 aaKnown RBP25.33■■□□□ 1.65
PCCB-208ENST00000468777 PLEKHG2Q9H7P9 1386 aa25.32■■□□□ 1.64
PCCB-208ENST00000468777 PLEKHF1Q96S99 279 aa25.32■■□□□ 1.64
PCCB-208ENST00000468777 PHKG2P15735 406 aa25.31■■□□□ 1.64
PCCB-208ENST00000468777 FAM196AQ6ZSG2 479 aa25.3■■□□□ 1.64
PCCB-208ENST00000468777 CENPBP07199 599 aaPredicted RBP25.3■■□□□ 1.64
PCCB-208ENST00000468777 IFNL2Q8IZJ0 200 aa25.3■■□□□ 1.64
PCCB-208ENST00000468777 ACSBG1Q96GR2 724 aa25.29■■□□□ 1.64
PCCB-208ENST00000468777 SBF2Q86WG5 1849 aa25.29■■□□□ 1.64
PCCB-208ENST00000468777 DOT1LQ8TEK3 1739 aa25.28■■□□□ 1.64
PCCB-208ENST00000468777 FAM9BQ8IZU0 186 aa25.28■■□□□ 1.64
PCCB-208ENST00000468777 C1orf141Q5JVX7 400 aa25.27■■□□□ 1.64
PCCB-208ENST00000468777 MAPK8IP3Q9UPT6 1336 aa25.26■■□□□ 1.63
PCCB-208ENST00000468777 TOGARAM1Q9Y4F4 1720 aa25.26■■□□□ 1.63
PCCB-208ENST00000468777 TRIM37O94972 964 aa25.26■■□□□ 1.63
PCCB-208ENST00000468777 PTF1AQ7RTS3 328 aa25.26■■□□□ 1.63
PCCB-208ENST00000468777 KCNQ2O43526 872 aa25.25■■□□□ 1.63
PCCB-208ENST00000468777 NEFMP07197 916 aa25.25■■□□□ 1.63
PCCB-208ENST00000468777 GAS2L2Q8NHY3 880 aa25.25■■□□□ 1.63
PCCB-208ENST00000468777 PNNQ9H307 717 aaKnown RBP25.25■■□□□ 1.63
PCCB-208ENST00000468777 AKAP4Q5JQC9 854 aa25.24■■□□□ 1.63
PCCB-208ENST00000468777 MPRIPQ6WCQ1 1025 aa25.24■■□□□ 1.63
PCCB-208ENST00000468777 BCL9O00512 1426 aa25.24■■□□□ 1.63
PCCB-208ENST00000468777 NKX1-1Q15270 411 aaPredicted RBP25.23■■□□□ 1.63
PCCB-208ENST00000468777 KDM6AO15550 1401 aaPredicted RBP25.23■■□□□ 1.63
PCCB-208ENST00000468777 SENP3-EIF4A1A0A087X0R7 540 aa25.23■■□□□ 1.63
PCCB-208ENST00000468777 SYTL4Q96C24 671 aaPredicted RBP25.23■■□□□ 1.63
PCCB-208ENST00000468777 DLG5Q8TDM6 1919 aa25.23■■□□□ 1.63
PCCB-208ENST00000468777 VIRMAQ69YN4 1812 aaKnown RBP25.23■■□□□ 1.63
PCCB-208ENST00000468777 RUNDC1Q96C34 613 aa25.22■■□□□ 1.63
PCCB-208ENST00000468777 NHSQ6T4R5 1651 aa25.21■■□□□ 1.63
PCCB-208ENST00000468777 MAP3K5Q99683 1374 aa25.2■■□□□ 1.63
PCCB-208ENST00000468777 PRIM1P49642 420 aaKnown RBP25.2■■□□□ 1.62
PCCB-208ENST00000468777 LGR6Q9HBX8 967 aa25.2■■□□□ 1.62
PCCB-208ENST00000468777 RRP7AQ9Y3A4 280 aaKnown RBP25.2■■□□□ 1.62
PCCB-208ENST00000468777 DCAF5Q96JK2 942 aa25.19■■□□□ 1.62
PCCB-208ENST00000468777 ITGB4P16144 1822 aa25.19■■□□□ 1.62
PCCB-208ENST00000468777 SCN11AQ9UI33 1791 aa25.19■■□□□ 1.62
PCCB-208ENST00000468777 GNAT3A8MTJ3 354 aa25.19■■□□□ 1.62
PCCB-208ENST00000468777 HSP90AB1P08238 724 aaKnown RBP25.19■■□□□ 1.62
PCCB-208ENST00000468777 NEUROD2Q15784 382 aa25.19■■□□□ 1.62
PCCB-208ENST00000468777 NFE2L2Q16236 605 aa25.19■■□□□ 1.62
PCCB-208ENST00000468777 UPF1Q92900 1129 aaKnown RBP eCLIP25.19■■□□□ 1.62
PCCB-208ENST00000468777 TNS1Q9HBL0 1735 aaKnown RBP25.19■■□□□ 1.62
PCCB-208ENST00000468777 APAF1O14727 1248 aa25.16■■□□□ 1.62
PCCB-208ENST00000468777 TMPOP42166 694 aaKnown RBP25.16■■□□□ 1.62
PCCB-208ENST00000468777 DCTN1Q14203 1278 aa25.16■■□□□ 1.62
PCCB-208ENST00000468777 BTAF1O14981 1849 aa25.15■■□□□ 1.62
PCCB-208ENST00000468777 RNMTO43148 476 aaKnown RBP25.15■■□□□ 1.62
PCCB-208ENST00000468777 BCL11BQ9C0K0 894 aaPredicted RBP25.15■■□□□ 1.62
PCCB-208ENST00000468777 RIPK4P57078 832 aa25.15■■□□□ 1.62
PCCB-208ENST00000468777 MCM10Q7L590 875 aa25.15■■□□□ 1.62
PCCB-208ENST00000468777 IL17REQ8NFR9 667 aa25.15■■□□□ 1.62
PCCB-208ENST00000468777 ADAMTS7Q9UKP4 1686 aa25.15■■□□□ 1.62
PCCB-208ENST00000468777 APBA3O96018 575 aa25.12■■□□□ 1.61
PCCB-208ENST00000468777 RTF1Q92541 710 aaKnown RBP25.12■■□□□ 1.61
PCCB-208ENST00000468777 TMOD3Q9NYL9 352 aa25.12■■□□□ 1.61
PCCB-208ENST00000468777 ERVV-2B6SEH9 535 aa25.11■■□□□ 1.61
PCCB-208ENST00000468777 CABP4P57796 275 aa25.11■■□□□ 1.61
PCCB-208ENST00000468777 SF3B2Q13435 895 aaKnown RBP25.11■■□□□ 1.61
PCCB-208ENST00000468777 NFATC2IPQ8NCF5 419 aa25.11■■□□□ 1.61
PCCB-208ENST00000468777 PIGBQ92521 554 aa25.11■■□□□ 1.61
PCCB-208ENST00000468777 THUMPD2Q9BTF0 503 aaKnown RBP25.11■■□□□ 1.61
PCCB-208ENST00000468777 DEFB132Q7Z7B7 95 aa25.11■■□□□ 1.61
PCCB-208ENST00000468777 CEMIPQ8WUJ3 1361 aa25.09■■□□□ 1.61
PCCB-208ENST00000468777 SLC52A2Q9HAB3 445 aa25.09■■□□□ 1.61
PCCB-208ENST00000468777 MRC1P22897 1456 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms