RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 ZNF511Q8NB15 262 aa8.29□□□□□ -1.08
U2AF1-207ENST00000468039 EPS8L1Q8TE68 723 aa8.29□□□□□ -1.08
U2AF1-207ENST00000468039 GJD4Q96KN9 370 aaPredicted RBP8.28□□□□□ -1.08
U2AF1-207ENST00000468039 TRIM34Q9BYJ4 488 aa8.28□□□□□ -1.08
U2AF1-207ENST00000468039 ERCC6L2Q5T890 1561 aa8.27□□□□□ -1.09
U2AF1-207ENST00000468039 ARAP1Q96P48 1450 aa8.27□□□□□ -1.09
U2AF1-207ENST00000468039 SH3BP2P78314 561 aa8.27□□□□□ -1.09
U2AF1-207ENST00000468039 PDXDC2PQ6P474 469 aa8.27□□□□□ -1.09
U2AF1-207ENST00000468039 BPHLQ86WA6 291 aaPredicted RBP8.27□□□□□ -1.09
U2AF1-207ENST00000468039 WWC1Q8IX03 1113 aa8.27□□□□□ -1.09
U2AF1-207ENST00000468039 RAPGEF2Q9Y4G8 1499 aa8.26□□□□□ -1.09
U2AF1-207ENST00000468039 PTK2Q05397 1052 aa8.26□□□□□ -1.09
U2AF1-207ENST00000468039 TRIM46Q7Z4K8 759 aa8.26□□□□□ -1.09
U2AF1-207ENST00000468039 Q8N3U1 123 aa8.26□□□□□ -1.09
U2AF1-207ENST00000468039 EHBP1Q8NDI1 1231 aa8.26□□□□□ -1.09
U2AF1-207ENST00000468039 PRXQ9BXM0 1461 aa8.26□□□□□ -1.09
U2AF1-207ENST00000468039 BMP1P13497 986 aa8.25□□□□□ -1.09
U2AF1-207ENST00000468039 IRS1P35568 1242 aa8.25□□□□□ -1.09
U2AF1-207ENST00000468039 RC3H1Q5TC82 1133 aaKnown RBP8.25□□□□□ -1.09
U2AF1-207ENST00000468039 CYB5RLQ6IPT4 315 aa8.25□□□□□ -1.09
U2AF1-207ENST00000468039 ARHGAP9Q9BRR9 750 aa8.25□□□□□ -1.09
U2AF1-207ENST00000468039 VARSP26640 1264 aaKnown RBP8.24□□□□□ -1.09
U2AF1-207ENST00000468039 ABL2P42684 1182 aa8.24□□□□□ -1.09
U2AF1-207ENST00000468039 SKOR1P84550 965 aa8.24□□□□□ -1.09
U2AF1-207ENST00000468039 ZBTB33Q86T24 672 aa8.24□□□□□ -1.09
U2AF1-207ENST00000468039 TBC1D2BQ9UPU7 963 aa8.24□□□□□ -1.09
U2AF1-207ENST00000468039 GPSM3Q9Y4H4 160 aa8.24□□□□□ -1.09
U2AF1-207ENST00000468039 SHROOM2Q13796 1616 aa8.24□□□□□ -1.09
U2AF1-207ENST00000468039 KIAA0586Q9BVV6 1533 aa8.24□□□□□ -1.09
U2AF1-207ENST00000468039 PRG4Q92954 1404 aaPredicted RBP8.23□□□□□ -1.09
U2AF1-207ENST00000468039 MAGEB6P1A0A0J9YX57 407 aa8.23□□□□□ -1.09
U2AF1-207ENST00000468039 FAM174AQ8TBP5 190 aa8.23□□□□□ -1.09
U2AF1-207ENST00000468039 FOXJ1Q92949 421 aa8.23□□□□□ -1.09
U2AF1-207ENST00000468039 GDPD2Q9HCC8 539 aa8.23□□□□□ -1.09
U2AF1-207ENST00000468039 ZNF330Q9Y3S2 320 aaPredicted RBP8.23□□□□□ -1.09
U2AF1-207ENST00000468039 EEA1Q15075 1411 aa8.22□□□□□ -1.09
U2AF1-207ENST00000468039 MSTNO14793 375 aa8.22□□□□□ -1.09
U2AF1-207ENST00000468039 SH3BP5LQ7L8J4 393 aa8.22□□□□□ -1.09
U2AF1-207ENST00000468039 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
U2AF1-207ENST00000468039 ZBBXA8MT70 800 aa8.21□□□□□ -1.1
U2AF1-207ENST00000468039 COG6Q9Y2V7 657 aa8.21□□□□□ -1.1
U2AF1-207ENST00000468039 IQGAP2Q13576 1575 aa8.2□□□□□ -1.1
U2AF1-207ENST00000468039 CAPN5O15484 640 aaPredicted RBP8.2□□□□□ -1.1
U2AF1-207ENST00000468039 ZNF592Q92610 1267 aa8.2□□□□□ -1.1
U2AF1-207ENST00000468039 TTBK1Q5TCY1 1321 aaPredicted RBP8.2□□□□□ -1.1
U2AF1-207ENST00000468039 NR1H3Q13133 447 aa8.19□□□□□ -1.1
U2AF1-207ENST00000468039 WASHC4Q2M389 1173 aa8.19□□□□□ -1.1
U2AF1-207ENST00000468039 SH3RF1Q7Z6J0 888 aa8.19□□□□□ -1.1
U2AF1-207ENST00000468039 HOMEZQ8IX15 550 aa8.19□□□□□ -1.1
U2AF1-207ENST00000468039 SLC10A4Q96EP9 437 aa8.19□□□□□ -1.1
U2AF1-207ENST00000468039 KRTAP4-12Q9BQ66 201 aa8.19□□□□□ -1.1
U2AF1-207ENST00000468039 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
U2AF1-207ENST00000468039 ZFP42Q96MM3 310 aa8.18□□□□□ -1.1
U2AF1-207ENST00000468039 KRTAP9-9Q9BYP9 154 aa8.18□□□□□ -1.1
U2AF1-207ENST00000468039 KRTAP9-4Q9BYQ2 154 aa8.18□□□□□ -1.1
U2AF1-207ENST00000468039 CTTNBP2Q8WZ74 1663 aa8.18□□□□□ -1.1
U2AF1-207ENST00000468039 KRTAP4-8A0A0G2JLE6 195 aa8.17□□□□□ -1.1
U2AF1-207ENST00000468039 FBXO45P0C2W1 286 aa8.17□□□□□ -1.1
U2AF1-207ENST00000468039 ARID5BQ14865 1188 aa8.17□□□□□ -1.1
U2AF1-207ENST00000468039 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
U2AF1-207ENST00000468039 DZIP3Q86Y13 1208 aaKnown RBP8.17□□□□□ -1.1
U2AF1-207ENST00000468039 POM121Q96HA1 1249 aa8.17□□□□□ -1.1
U2AF1-207ENST00000468039 CDV3Q9UKY7 258 aaKnown RBP8.17□□□□□ -1.1
U2AF1-207ENST00000468039 KIF21BO75037 1637 aa8.16□□□□□ -1.1
U2AF1-207ENST00000468039 RANGAP1P46060 587 aaPredicted RBP8.16□□□□□ -1.1
U2AF1-207ENST00000468039 MCCD1P59942 119 aaPredicted RBP8.16□□□□□ -1.1
U2AF1-207ENST00000468039 EIF4G2P78344 907 aaKnown RBP eCLIP8.16□□□□□ -1.1
U2AF1-207ENST00000468039 ERFEQ4G0M1 354 aa8.16□□□□□ -1.1
U2AF1-207ENST00000468039 CLUAP1Q96AJ1 413 aa8.16□□□□□ -1.1
U2AF1-207ENST00000468039 DISP1Q96F81 1524 aa8.16□□□□□ -1.1
U2AF1-207ENST00000468039 UGGT2Q9NYU1 1516 aa8.16□□□□□ -1.1
U2AF1-207ENST00000468039 PCDHB9Q9Y5E1 797 aa8.16□□□□□ -1.1
U2AF1-207ENST00000468039 WASF2Q9Y6W5 498 aa8.16□□□□□ -1.1
U2AF1-207ENST00000468039 ALDH1A1P00352 501 aa8.15□□□□□ -1.1
U2AF1-207ENST00000468039 VASH1Q7L8A9 365 aaPredicted RBP8.15□□□□□ -1.1
U2AF1-207ENST00000468039 C14orf37Q86TY3 774 aa8.15□□□□□ -1.1
U2AF1-207ENST00000468039 TRMT44Q8IYL2 757 aaKnown RBP8.15□□□□□ -1.1
U2AF1-207ENST00000468039 SCARF2Q96GP6 870 aaPredicted RBP8.15□□□□□ -1.1
U2AF1-207ENST00000468039 C1QTNF2Q9BXJ5 285 aa8.15□□□□□ -1.1
U2AF1-207ENST00000468039 KIAA0556O60303 1618 aa8.14□□□□□ -1.11
U2AF1-207ENST00000468039 CARMIL2Q6F5E8 1435 aa8.14□□□□□ -1.11
U2AF1-207ENST00000468039 SIAH2O43255 324 aa8.14□□□□□ -1.11
U2AF1-207ENST00000468039 VAC14Q08AM6 782 aa8.14□□□□□ -1.11
U2AF1-207ENST00000468039 IRF5Q13568 498 aa8.14□□□□□ -1.11
U2AF1-207ENST00000468039 NBPF20Q3BBV1 942 aa8.14□□□□□ -1.11
U2AF1-207ENST00000468039 PROSER2Q86WR7 435 aaPredicted RBP8.14□□□□□ -1.11
U2AF1-207ENST00000468039 MPNDQ8N594 471 aa8.14□□□□□ -1.11
U2AF1-207ENST00000468039 TLL2Q9Y6L7 1015 aa8.14□□□□□ -1.11
U2AF1-207ENST00000468039 GOLGA3Q08378 1498 aa8.13□□□□□ -1.11
U2AF1-207ENST00000468039 A6NJR5 290 aa8.13□□□□□ -1.11
U2AF1-207ENST00000468039 K7ELQ4 463 aaPredicted RBP8.13□□□□□ -1.11
U2AF1-207ENST00000468039 GPR37L1O60883 481 aa8.13□□□□□ -1.11
U2AF1-207ENST00000468039 MARSP56192 900 aaKnown RBP8.13□□□□□ -1.11
U2AF1-207ENST00000468039 SVOPQ8N4V2 548 aa8.13□□□□□ -1.11
U2AF1-207ENST00000468039 SPOCK3Q9BQ16 436 aa8.13□□□□□ -1.11
U2AF1-207ENST00000468039 OCSTAMPQ9BR26 566 aa8.13□□□□□ -1.11
U2AF1-207ENST00000468039 PTPRGP23470 1445 aa8.12□□□□□ -1.11
U2AF1-207ENST00000468039 TNIKQ9UKE5 1360 aa8.12□□□□□ -1.11
U2AF1-207ENST00000468039 SOX11P35716 441 aa8.12□□□□□ -1.11
U2AF1-207ENST00000468039 CDK15Q96Q40 435 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms