RNA–Protein interactions for RNA: ENST00000467854.1

CNTNAP3B-204, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 1,238 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-204ENST00000467854 ONECUT3O60422 494 aaPredicted RBP29.95■■■□□ 2.39
CNTNAP3B-204ENST00000467854 TNS2Q63HR2 1409 aa29.95■■■□□ 2.38
CNTNAP3B-204ENST00000467854 BRWD3Q6RI45 1802 aa29.94■■■□□ 2.38
CNTNAP3B-204ENST00000467854 SHANK3Q9BYB0 1731 aa29.94■■■□□ 2.38
CNTNAP3B-204ENST00000467854 TATP17735 454 aaPredicted RBP29.94■■■□□ 2.38
CNTNAP3B-204ENST00000467854 WDR43Q15061 677 aaKnown RBP eCLIP29.94■■■□□ 2.38
CNTNAP3B-204ENST00000467854 SEPT12Q8IYM1 358 aa29.94■■■□□ 2.38
CNTNAP3B-204ENST00000467854 CCER2I3L3R5 266 aa29.92■■■□□ 2.38
CNTNAP3B-204ENST00000467854 RSPH6AQ9H0K4 717 aa29.91■■■□□ 2.38
CNTNAP3B-204ENST00000467854 DDB1Q16531 1140 aa29.89■■■□□ 2.38
CNTNAP3B-204ENST00000467854 PLEKHG2Q9H7P9 1386 aa29.89■■■□□ 2.37
CNTNAP3B-204ENST00000467854 PRKAR2BP31323 418 aa29.88■■■□□ 2.37
CNTNAP3B-204ENST00000467854 FCHSD2O94868 740 aa29.86■■■□□ 2.37
CNTNAP3B-204ENST00000467854 PNISRQ8TF01 805 aaKnown RBP29.86■■■□□ 2.37
CNTNAP3B-204ENST00000467854 ADAMTS8Q9UP79 889 aa29.85■■■□□ 2.37
CNTNAP3B-204ENST00000467854 EXOC5O00471 708 aa29.84■■■□□ 2.37
CNTNAP3B-204ENST00000467854 ZCRB1Q8TBF4 217 aaKnown RBP29.84■■■□□ 2.37
CNTNAP3B-204ENST00000467854 SPG7Q9UQ90 795 aa29.82■■■□□ 2.36
CNTNAP3B-204ENST00000467854 PDE3BQ13370 1112 aa29.81■■■□□ 2.36
CNTNAP3B-204ENST00000467854 PLEKHO1Q53GL0 409 aaPredicted RBP29.81■■■□□ 2.36
CNTNAP3B-204ENST00000467854 PCDH11XQ9BZA7 1347 aa29.8■■■□□ 2.36
CNTNAP3B-204ENST00000467854 PCDH11YQ9BZA8 1340 aa29.8■■■□□ 2.36
CNTNAP3B-204ENST00000467854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.8■■■□□ 2.36
CNTNAP3B-204ENST00000467854 AMOTQ4VCS5 1084 aa29.79■■■□□ 2.36
CNTNAP3B-204ENST00000467854 KRT27Q7Z3Y8 459 aa29.79■■■□□ 2.36
CNTNAP3B-204ENST00000467854 CCDC146Q8IYE0 955 aa29.79■■■□□ 2.36
CNTNAP3B-204ENST00000467854 PLEKHF1Q96S99 279 aa29.79■■■□□ 2.36
CNTNAP3B-204ENST00000467854 DDX54Q8TDD1 881 aaKnown RBP29.78■■■□□ 2.36
CNTNAP3B-204ENST00000467854 PHACTR3Q96KR7 559 aa29.78■■■□□ 2.36
CNTNAP3B-204ENST00000467854 PNNQ9H307 717 aaKnown RBP29.78■■■□□ 2.36
CNTNAP3B-204ENST00000467854 MAPK8IP3Q9UPT6 1336 aa29.77■■■□□ 2.36
CNTNAP3B-204ENST00000467854 ZNF530Q6P9A1 599 aaPredicted RBP29.77■■■□□ 2.36
CNTNAP3B-204ENST00000467854 FAM9BQ8IZU0 186 aa29.77■■■□□ 2.36
CNTNAP3B-204ENST00000467854 MARCH10Q8NA82 808 aaPredicted RBP29.77■■■□□ 2.36
CNTNAP3B-204ENST00000467854 NEFMP07197 916 aa29.76■■■□□ 2.35
CNTNAP3B-204ENST00000467854 MTHFSDQ2M296 383 aaKnown RBP29.76■■■□□ 2.35
CNTNAP3B-204ENST00000467854 CYP27B1O15528 508 aa29.75■■■□□ 2.35
CNTNAP3B-204ENST00000467854 FAM182BQ5T319 152 aa29.74■■■□□ 2.35
CNTNAP3B-204ENST00000467854 RUNDC1Q96C34 613 aa29.73■■■□□ 2.35
CNTNAP3B-204ENST00000467854 DOT1LQ8TEK3 1739 aa29.72■■■□□ 2.35
CNTNAP3B-204ENST00000467854 PHKG2P15735 406 aa29.72■■■□□ 2.35
CNTNAP3B-204ENST00000467854 GAS2L2Q8NHY3 880 aa29.72■■■□□ 2.35
CNTNAP3B-204ENST00000467854 IFNL2Q8IZJ0 200 aa29.71■■■□□ 2.35
CNTNAP3B-204ENST00000467854 DLG5Q8TDM6 1919 aa29.71■■■□□ 2.35
CNTNAP3B-204ENST00000467854 TOGARAM1Q9Y4F4 1720 aa29.71■■■□□ 2.35
CNTNAP3B-204ENST00000467854 C1orf141Q5JVX7 400 aa29.7■■■□□ 2.35
CNTNAP3B-204ENST00000467854 VIRMAQ69YN4 1812 aaKnown RBP29.68■■■□□ 2.34
CNTNAP3B-204ENST00000467854 MAP3K5Q99683 1374 aa29.67■■■□□ 2.34
CNTNAP3B-204ENST00000467854 AKAP4Q5JQC9 854 aa29.67■■■□□ 2.34
CNTNAP3B-204ENST00000467854 BCL9O00512 1426 aa29.66■■■□□ 2.34
CNTNAP3B-204ENST00000467854 KDM6AO15550 1401 aaPredicted RBP29.66■■■□□ 2.34
CNTNAP3B-204ENST00000467854 NFE2L2Q16236 605 aa29.66■■■□□ 2.34
CNTNAP3B-204ENST00000467854 SBF2Q86WG5 1849 aa29.66■■■□□ 2.34
CNTNAP3B-204ENST00000467854 SCN11AQ9UI33 1791 aa29.65■■■□□ 2.34
CNTNAP3B-204ENST00000467854 NHSQ6T4R5 1651 aa29.65■■■□□ 2.34
CNTNAP3B-204ENST00000467854 ADAMTS7Q9UKP4 1686 aa29.65■■■□□ 2.34
CNTNAP3B-204ENST00000467854 HSP90AB1P08238 724 aaKnown RBP29.63■■■□□ 2.33
CNTNAP3B-204ENST00000467854 NKX1-1Q15270 411 aaPredicted RBP29.63■■■□□ 2.33
CNTNAP3B-204ENST00000467854 FAM196AQ6ZSG2 479 aa29.63■■■□□ 2.33
CNTNAP3B-204ENST00000467854 RRP7AQ9Y3A4 280 aaKnown RBP29.62■■■□□ 2.33
CNTNAP3B-204ENST00000467854 GNAT3A8MTJ3 354 aa29.61■■■□□ 2.33
CNTNAP3B-204ENST00000467854 APAF1O14727 1248 aa29.61■■■□□ 2.33
CNTNAP3B-204ENST00000467854 TMPOP42166 694 aaKnown RBP29.61■■■□□ 2.33
CNTNAP3B-204ENST00000467854 MPRIPQ6WCQ1 1025 aa29.61■■■□□ 2.33
CNTNAP3B-204ENST00000467854 DCAF5Q96JK2 942 aa29.6■■■□□ 2.33
CNTNAP3B-204ENST00000467854 ITGB4P16144 1822 aa29.59■■■□□ 2.33
CNTNAP3B-204ENST00000467854 ACSBG1Q96GR2 724 aa29.59■■■□□ 2.33
CNTNAP3B-204ENST00000467854 SENP3-EIF4A1A0A087X0R7 540 aa29.58■■■□□ 2.33
CNTNAP3B-204ENST00000467854 NEUROD2Q15784 382 aa29.58■■■□□ 2.33
CNTNAP3B-204ENST00000467854 RIPK4P57078 832 aa29.57■■■□□ 2.32
CNTNAP3B-204ENST00000467854 TNS1Q9HBL0 1735 aaKnown RBP29.57■■■□□ 2.32
CNTNAP3B-204ENST00000467854 MRC1P22897 1456 aa29.56■■■□□ 2.32
CNTNAP3B-204ENST00000467854 RNMTO43148 476 aaKnown RBP29.55■■■□□ 2.32
CNTNAP3B-204ENST00000467854 RTF1Q92541 710 aaKnown RBP29.55■■■□□ 2.32
CNTNAP3B-204ENST00000467854 LGR6Q9HBX8 967 aa29.55■■■□□ 2.32
CNTNAP3B-204ENST00000467854 SYTL4Q96C24 671 aaPredicted RBP29.54■■■□□ 2.32
CNTNAP3B-204ENST00000467854 BTAF1O14981 1849 aa29.53■■■□□ 2.32
CNTNAP3B-204ENST00000467854 HTATSF1O43719 755 aaKnown RBP29.53■■■□□ 2.32
CNTNAP3B-204ENST00000467854 DCTN1Q14203 1278 aa29.53■■■□□ 2.32
CNTNAP3B-204ENST00000467854 MCM10Q7L590 875 aa29.53■■■□□ 2.32
CNTNAP3B-204ENST00000467854 KAT6BQ8WYB5 2073 aa29.52■■■□□ 2.32
CNTNAP3B-204ENST00000467854 CEMIPQ8WUJ3 1361 aa29.52■■■□□ 2.32
CNTNAP3B-204ENST00000467854 EP400Q96L91 3159 aa29.52■■■□□ 2.32
CNTNAP3B-204ENST00000467854 SIPA1L3O60292 1781 aaPredicted RBP29.52■■■□□ 2.32
CNTNAP3B-204ENST00000467854 KCNQ2O43526 872 aa29.52■■■□□ 2.32
CNTNAP3B-204ENST00000467854 TRIM37O94972 964 aa29.52■■■□□ 2.32
CNTNAP3B-204ENST00000467854 PRIM1P49642 420 aaKnown RBP29.52■■■□□ 2.32
CNTNAP3B-204ENST00000467854 LMOD3Q0VAK6 560 aa29.52■■■□□ 2.32
CNTNAP3B-204ENST00000467854 IL17REQ8NFR9 667 aa29.52■■■□□ 2.32
CNTNAP3B-204ENST00000467854 ERVV-2B6SEH9 535 aa29.5■■■□□ 2.31
CNTNAP3B-204ENST00000467854 PTF1AQ7RTS3 328 aa29.5■■■□□ 2.31
CNTNAP3B-204ENST00000467854 CABP4P57796 275 aa29.49■■■□□ 2.31
CNTNAP3B-204ENST00000467854 THUMPD2Q9BTF0 503 aaKnown RBP29.49■■■□□ 2.31
CNTNAP3B-204ENST00000467854 TRIM35Q9UPQ4 493 aa29.49■■■□□ 2.31
CNTNAP3B-204ENST00000467854 TMOD3Q9NYL9 352 aa29.48■■■□□ 2.31
CNTNAP3B-204ENST00000467854 BCL11BQ9C0K0 894 aaPredicted RBP29.47■■■□□ 2.31
CNTNAP3B-204ENST00000467854 SLC52A2Q9HAB3 445 aa29.47■■■□□ 2.31
CNTNAP3B-204ENST00000467854 PAPPAQ13219 1627 aa29.46■■■□□ 2.31
CNTNAP3B-204ENST00000467854 TEFQ10587 303 aa29.46■■■□□ 2.31
CNTNAP3B-204ENST00000467854 SALL2Q9Y467 1007 aaPredicted RBP29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms