RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
APP-214ENST00000466453 BRCA1P38398 1863 aaKnown RBP11.87□□□□□ -0.51
APP-214ENST00000466453 NLRP13Q86W25 1043 aa11.87□□□□□ -0.51
APP-214ENST00000466453 CCDC7Q96M83 1385 aa11.87□□□□□ -0.51
APP-214ENST00000466453 RGPD5Q99666 1765 aa11.87□□□□□ -0.51
APP-214ENST00000466453 SLIT3O75094 1523 aa11.86□□□□□ -0.51
APP-214ENST00000466453 ARFGEF1Q9Y6D6 1849 aa11.86□□□□□ -0.51
APP-214ENST00000466453 C14orf93Q9H972 538 aaKnown RBP11.86□□□□□ -0.51
APP-214ENST00000466453 N4BP2Q86UW6 1770 aaPredicted RBP11.86□□□□□ -0.51
APP-214ENST00000466453 SBF1O95248 1867 aa11.85□□□□□ -0.51
APP-214ENST00000466453 ZBTB7CA1YPR0 619 aa11.85□□□□□ -0.51
APP-214ENST00000466453 BCS1LQ9Y276 419 aa11.85□□□□□ -0.51
APP-214ENST00000466453 AXIN2Q9Y2T1 843 aa11.85□□□□□ -0.51
APP-214ENST00000466453 SPATA31E1Q6ZUB1 1445 aa11.85□□□□□ -0.51
APP-214ENST00000466453 MINK1Q8N4C8 1332 aaPredicted RBP11.85□□□□□ -0.51
APP-214ENST00000466453 FLAD1Q8NFF5 587 aa11.84□□□□□ -0.51
APP-214ENST00000466453 CCNL1Q9UK58 526 aaPredicted RBP11.83□□□□□ -0.52
APP-214ENST00000466453 C5P01031 1676 aa11.83□□□□□ -0.52
APP-214ENST00000466453 CPSF1Q10570 1443 aaKnown RBP11.83□□□□□ -0.52
APP-214ENST00000466453 VEGFAP15692 232 aaPredicted RBP11.82□□□□□ -0.52
APP-214ENST00000466453 NUDT16Q96DE0 195 aaKnown RBP11.82□□□□□ -0.52
APP-214ENST00000466453 CFAP44Q96MT7 982 aa11.82□□□□□ -0.52
APP-214ENST00000466453 ACEP12821 1306 aa11.82□□□□□ -0.52
APP-214ENST00000466453 RNF181Q9P0P0 153 aa11.81□□□□□ -0.52
APP-214ENST00000466453 ZC3H4Q9UPT8 1303 aaKnown RBP11.81□□□□□ -0.52
APP-214ENST00000466453 SZT2Q5T011 3432 aa11.8□□□□□ -0.52
APP-214ENST00000466453 CSB-PGBD3P0DP91 1061 aa11.8□□□□□ -0.52
APP-214ENST00000466453 VEGFBP49765 207 aa11.8□□□□□ -0.52
APP-214ENST00000466453 TAF1LQ8IZX4 1826 aa11.8□□□□□ -0.52
APP-214ENST00000466453 TOGARAM1Q9Y4F4 1720 aa11.8□□□□□ -0.52
APP-214ENST00000466453 NSD2O96028 1365 aa11.79□□□□□ -0.52
APP-214ENST00000466453 RGL3Q3MIN7 710 aa11.79□□□□□ -0.52
APP-214ENST00000466453 CFAP70Q5T0N1 1121 aa11.79□□□□□ -0.52
APP-214ENST00000466453 DOT1LQ8TEK3 1739 aa11.78□□□□□ -0.52
APP-214ENST00000466453 FCHSD2O94868 740 aa11.78□□□□□ -0.52
APP-214ENST00000466453 TGFB2P61812 414 aa11.78□□□□□ -0.52
APP-214ENST00000466453 ADGRB1O14514 1584 aa11.78□□□□□ -0.52
APP-214ENST00000466453 UBR3Q6ZT12 1888 aa11.78□□□□□ -0.52
APP-214ENST00000466453 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.53
APP-214ENST00000466453 ANKRD36BQ8N2N9 1353 aa11.77□□□□□ -0.53
APP-214ENST00000466453 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
APP-214ENST00000466453 ERBB3P21860 1342 aa11.76□□□□□ -0.53
APP-214ENST00000466453 IL2RBP14784 551 aa11.75□□□□□ -0.53
APP-214ENST00000466453 MAP2K1Q02750 393 aaPredicted RBP11.75□□□□□ -0.53
APP-214ENST00000466453 ARHGEF25Q86VW2 580 aa11.75□□□□□ -0.53
APP-214ENST00000466453 GLTPD2A6NH11 291 aa11.74□□□□□ -0.53
APP-214ENST00000466453 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
APP-214ENST00000466453 GCC1Q96CN9 775 aa11.74□□□□□ -0.53
APP-214ENST00000466453 MCOLN1Q9GZU1 580 aa11.74□□□□□ -0.53
APP-214ENST00000466453 TRAK1Q9UPV9 953 aa11.74□□□□□ -0.53
APP-214ENST00000466453 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
APP-214ENST00000466453 KDM6AO15550 1401 aaPredicted RBP11.74□□□□□ -0.53
APP-214ENST00000466453 C4BP0C0L5 1744 aa11.74□□□□□ -0.53
APP-214ENST00000466453 DLL1O00548 723 aa11.73□□□□□ -0.53
APP-214ENST00000466453 HMGB2P26583 209 aaKnown RBP11.73□□□□□ -0.53
APP-214ENST00000466453 PRIM1P49642 420 aaKnown RBP11.73□□□□□ -0.53
APP-214ENST00000466453 NLRP6P59044 892 aa11.73□□□□□ -0.53
APP-214ENST00000466453 APLP2Q06481 763 aa11.73□□□□□ -0.53
APP-214ENST00000466453 AMIGO3Q86WK7 504 aa11.73□□□□□ -0.53
APP-214ENST00000466453 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
APP-214ENST00000466453 CASP8AP2Q9UKL3 1982 aa11.72□□□□□ -0.53
APP-214ENST00000466453 THSD7BQ9C0I4 1608 aa11.72□□□□□ -0.53
APP-214ENST00000466453 NSD3Q9BZ95 1437 aa11.72□□□□□ -0.53
APP-214ENST00000466453 POTECB2RU33 542 aa11.72□□□□□ -0.53
APP-214ENST00000466453 DPEP1P16444 411 aa11.72□□□□□ -0.53
APP-214ENST00000466453 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
APP-214ENST00000466453 SMIM5Q71RC9 77 aa11.72□□□□□ -0.53
APP-214ENST00000466453 MKI67P46013 3256 aaKnown RBP11.72□□□□□ -0.53
APP-214ENST00000466453 TIAM2Q8IVF5 1701 aa11.72□□□□□ -0.53
APP-214ENST00000466453 USP47Q96K76 1375 aa11.71□□□□□ -0.53
APP-214ENST00000466453 PASKQ96RG2 1323 aa11.71□□□□□ -0.53
APP-214ENST00000466453 COL6A3P12111 3177 aa11.71□□□□□ -0.53
APP-214ENST00000466453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.69□□□□□ -0.54
APP-214ENST00000466453 MMP10P09238 476 aa11.69□□□□□ -0.54
APP-214ENST00000466453 HABP4Q5JVS0 413 aaKnown RBP11.69□□□□□ -0.54
APP-214ENST00000466453 RASSF10A6NK89 507 aa11.68□□□□□ -0.54
APP-214ENST00000466453 TMEM88BA6NKF7 163 aa11.68□□□□□ -0.54
APP-214ENST00000466453 KCNA3P22001 575 aa11.68□□□□□ -0.54
APP-214ENST00000466453 AK7Q96M32 723 aa11.68□□□□□ -0.54
APP-214ENST00000466453 CDK19Q9BWU1 502 aa11.68□□□□□ -0.54
APP-214ENST00000466453 NFAT5O94916 1531 aa11.68□□□□□ -0.54
APP-214ENST00000466453 LTBP1Q14766 1721 aa11.68□□□□□ -0.54
APP-214ENST00000466453 PHF14O94880 888 aa11.67□□□□□ -0.54
APP-214ENST00000466453 SSFA2P28290 1259 aa11.67□□□□□ -0.54
APP-214ENST00000466453 DDX54Q8TDD1 881 aaKnown RBP11.67□□□□□ -0.54
APP-214ENST00000466453 NLRP2Q9NX02 1062 aa11.67□□□□□ -0.54
APP-214ENST00000466453 CCDC88AQ3V6T2 1871 aa11.67□□□□□ -0.54
APP-214ENST00000466453 WDR33Q9C0J8 1336 aaKnown RBP11.66□□□□□ -0.54
APP-214ENST00000466453 TRIOBPQ9H2D6 2365 aa11.66□□□□□ -0.54
APP-214ENST00000466453 SOX10P56693 466 aa11.66□□□□□ -0.54
APP-214ENST00000466453 DALRD3Q5D0E6 543 aaKnown RBP11.66□□□□□ -0.54
APP-214ENST00000466453 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
APP-214ENST00000466453 PIM2Q9P1W9 311 aa11.66□□□□□ -0.54
APP-214ENST00000466453 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
APP-214ENST00000466453 BEGAINQ9BUH8 593 aa11.65□□□□□ -0.54
APP-214ENST00000466453 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
APP-214ENST00000466453 CEP290O15078 2479 aa11.64□□□□□ -0.55
APP-214ENST00000466453 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
APP-214ENST00000466453 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
APP-214ENST00000466453 LMNB1P20700 586 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms