RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 PRKAR2BP31323 418 aa23.43■■□□□ 1.34
LST1-220ENST00000464526 MYT1Q01538 1121 aa23.43■■□□□ 1.34
LST1-220ENST00000464526 CCDC146Q8IYE0 955 aa23.43■■□□□ 1.34
LST1-220ENST00000464526 PHACTR3Q96KR7 559 aa23.43■■□□□ 1.34
LST1-220ENST00000464526 NUDCQ9Y266 331 aa23.43■■□□□ 1.34
LST1-220ENST00000464526 SEPT12Q8IYM1 358 aa23.43■■□□□ 1.34
LST1-220ENST00000464526 THRAP3Q9Y2W1 955 aaKnown RBP23.43■■□□□ 1.34
LST1-220ENST00000464526 CCER2I3L3R5 266 aa23.42■■□□□ 1.34
LST1-220ENST00000464526 FAM182BQ5T319 152 aa23.41■■□□□ 1.34
LST1-220ENST00000464526 TNS2Q63HR2 1409 aa23.41■■□□□ 1.34
LST1-220ENST00000464526 ONECUT3O60422 494 aaPredicted RBP23.4■■□□□ 1.34
LST1-220ENST00000464526 WDR43Q15061 677 aaKnown RBP eCLIP23.4■■□□□ 1.34
LST1-220ENST00000464526 FAM9BQ8IZU0 186 aa23.4■■□□□ 1.34
LST1-220ENST00000464526 RAPGEF4Q8WZA2 1011 aa23.4■■□□□ 1.34
LST1-220ENST00000464526 PLEKHF1Q96S99 279 aa23.4■■□□□ 1.34
LST1-220ENST00000464526 TATP17735 454 aaPredicted RBP23.38■■□□□ 1.33
LST1-220ENST00000464526 CYP27B1O15528 508 aa23.36■■□□□ 1.33
LST1-220ENST00000464526 MTHFSDQ2M296 383 aaKnown RBP23.36■■□□□ 1.33
LST1-220ENST00000464526 FCHSD2O94868 740 aa23.35■■□□□ 1.33
LST1-220ENST00000464526 DDB1Q16531 1140 aa23.35■■□□□ 1.33
LST1-220ENST00000464526 MARCH10Q8NA82 808 aaPredicted RBP23.34■■□□□ 1.33
LST1-220ENST00000464526 ZCRB1Q8TBF4 217 aaKnown RBP23.33■■□□□ 1.33
LST1-220ENST00000464526 DDX54Q8TDD1 881 aaKnown RBP23.33■■□□□ 1.33
LST1-220ENST00000464526 TOGARAM1Q9Y4F4 1720 aa23.33■■□□□ 1.33
LST1-220ENST00000464526 DLG5Q8TDM6 1919 aa23.32■■□□□ 1.32
LST1-220ENST00000464526 RRP7AQ9Y3A4 280 aaKnown RBP23.31■■□□□ 1.32
LST1-220ENST00000464526 ILDR2Q71H61 639 aa23.31■■□□□ 1.32
LST1-220ENST00000464526 EXOC5O00471 708 aa23.3■■□□□ 1.32
LST1-220ENST00000464526 ZNF530Q6P9A1 599 aaPredicted RBP23.3■■□□□ 1.32
LST1-220ENST00000464526 CDCA7Q9BWT1 371 aaPredicted RBP23.3■■□□□ 1.32
LST1-220ENST00000464526 KDM6AO15550 1401 aaPredicted RBP23.28■■□□□ 1.32
LST1-220ENST00000464526 PHKG2P15735 406 aa23.28■■□□□ 1.32
LST1-220ENST00000464526 DOT1LQ8TEK3 1739 aa23.28■■□□□ 1.32
LST1-220ENST00000464526 PCDH11XQ9BZA7 1347 aa23.27■■□□□ 1.32
LST1-220ENST00000464526 PCDH11YQ9BZA8 1340 aa23.27■■□□□ 1.32
LST1-220ENST00000464526 VIRMAQ69YN4 1812 aaKnown RBP23.27■■□□□ 1.32
LST1-220ENST00000464526 PLEKHO1Q53GL0 409 aaPredicted RBP23.26■■□□□ 1.31
LST1-220ENST00000464526 PTF1AQ7RTS3 328 aa23.26■■□□□ 1.31
LST1-220ENST00000464526 KRT27Q7Z3Y8 459 aa23.26■■□□□ 1.31
LST1-220ENST00000464526 APAF1O14727 1248 aa23.26■■□□□ 1.31
LST1-220ENST00000464526 RUNDC1Q96C34 613 aa23.26■■□□□ 1.31
LST1-220ENST00000464526 SPG7Q9UQ90 795 aa23.26■■□□□ 1.31
LST1-220ENST00000464526 PDE3BQ13370 1112 aa23.25■■□□□ 1.31
LST1-220ENST00000464526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.25■■□□□ 1.31
LST1-220ENST00000464526 MAPK8IP3Q9UPT6 1336 aa23.25■■□□□ 1.31
LST1-220ENST00000464526 DCTN1Q14203 1278 aa23.24■■□□□ 1.31
LST1-220ENST00000464526 NEUROD2Q15784 382 aa23.24■■□□□ 1.31
LST1-220ENST00000464526 AMOTQ4VCS5 1084 aa23.24■■□□□ 1.31
LST1-220ENST00000464526 MPRIPQ6WCQ1 1025 aa23.24■■□□□ 1.31
LST1-220ENST00000464526 THUMPD2Q9BTF0 503 aaKnown RBP23.23■■□□□ 1.31
LST1-220ENST00000464526 ADAMTS7Q9UKP4 1686 aa23.23■■□□□ 1.31
LST1-220ENST00000464526 PLEKHG2Q9H7P9 1386 aa23.22■■□□□ 1.31
LST1-220ENST00000464526 SBF2Q86WG5 1849 aa23.22■■□□□ 1.31
LST1-220ENST00000464526 TMPOP42166 694 aaKnown RBP23.22■■□□□ 1.31
LST1-220ENST00000464526 NFE2L2Q16236 605 aa23.22■■□□□ 1.31
LST1-220ENST00000464526 LGR6Q9HBX8 967 aa23.22■■□□□ 1.31
LST1-220ENST00000464526 MAP3K5Q99683 1374 aa23.22■■□□□ 1.31
LST1-220ENST00000464526 ACSBG1Q96GR2 724 aa23.22■■□□□ 1.31
LST1-220ENST00000464526 SALL2Q9Y467 1007 aaPredicted RBP23.22■■□□□ 1.31
LST1-220ENST00000464526 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
LST1-220ENST00000464526 IFNL2Q8IZJ0 200 aa23.21■■□□□ 1.31
LST1-220ENST00000464526 KCNQ2O43526 872 aa23.2■■□□□ 1.3
LST1-220ENST00000464526 MCM10Q7L590 875 aa23.2■■□□□ 1.3
LST1-220ENST00000464526 GAS2L2Q8NHY3 880 aa23.2■■□□□ 1.3
LST1-220ENST00000464526 AKAP4Q5JQC9 854 aa23.19■■□□□ 1.3
LST1-220ENST00000464526 KAT6BQ8WYB5 2073 aa23.19■■□□□ 1.3
LST1-220ENST00000464526 C1orf141Q5JVX7 400 aa23.19■■□□□ 1.3
LST1-220ENST00000464526 IL17REQ8NFR9 667 aa23.19■■□□□ 1.3
LST1-220ENST00000464526 ITGB4P16144 1822 aa23.18■■□□□ 1.3
LST1-220ENST00000464526 TRIM35Q9UPQ4 493 aa23.18■■□□□ 1.3
LST1-220ENST00000464526 RIPK4P57078 832 aa23.17■■□□□ 1.3
LST1-220ENST00000464526 NKX1-1Q15270 411 aaPredicted RBP23.17■■□□□ 1.3
LST1-220ENST00000464526 NHSQ6T4R5 1651 aa23.16■■□□□ 1.3
LST1-220ENST00000464526 GNAT3A8MTJ3 354 aa23.16■■□□□ 1.3
LST1-220ENST00000464526 RNMTO43148 476 aaKnown RBP23.15■■□□□ 1.3
LST1-220ENST00000464526 PNNQ9H307 717 aaKnown RBP23.15■■□□□ 1.3
LST1-220ENST00000464526 SIPA1L3O60292 1781 aaPredicted RBP23.14■■□□□ 1.3
LST1-220ENST00000464526 MRC1P22897 1456 aa23.14■■□□□ 1.3
LST1-220ENST00000464526 NEFMP07197 916 aa23.14■■□□□ 1.29
LST1-220ENST00000464526 BCL9O00512 1426 aa23.13■■□□□ 1.29
LST1-220ENST00000464526 TNS1Q9HBL0 1735 aaKnown RBP23.13■■□□□ 1.29
LST1-220ENST00000464526 CEMIPQ8WUJ3 1361 aa23.13■■□□□ 1.29
LST1-220ENST00000464526 PRIM1P49642 420 aaKnown RBP23.13■■□□□ 1.29
LST1-220ENST00000464526 SYTL4Q96C24 671 aaPredicted RBP23.12■■□□□ 1.29
LST1-220ENST00000464526 BTAF1O14981 1849 aa23.12■■□□□ 1.29
LST1-220ENST00000464526 TRIM37O94972 964 aa23.12■■□□□ 1.29
LST1-220ENST00000464526 DCAF5Q96JK2 942 aa23.12■■□□□ 1.29
LST1-220ENST00000464526 FAM196AQ6ZSG2 479 aa23.1■■□□□ 1.29
LST1-220ENST00000464526 NFATC2IPQ8NCF5 419 aa23.08■■□□□ 1.29
LST1-220ENST00000464526 PIGBQ92521 554 aa23.08■■□□□ 1.29
LST1-220ENST00000464526 HSP90AB1P08238 724 aaKnown RBP23.07■■□□□ 1.28
LST1-220ENST00000464526 RTF1Q92541 710 aaKnown RBP23.07■■□□□ 1.28
LST1-220ENST00000464526 SLC52A2Q9HAB3 445 aa23.07■■□□□ 1.28
LST1-220ENST00000464526 MIS18AQ9NYP9 233 aa23.07■■□□□ 1.28
LST1-220ENST00000464526 PAPPAQ13219 1627 aa23.07■■□□□ 1.28
LST1-220ENST00000464526 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
LST1-220ENST00000464526 WWC1Q8IX03 1113 aa23.06■■□□□ 1.28
LST1-220ENST00000464526 KCNQ3O43525 872 aa23.05■■□□□ 1.28
LST1-220ENST00000464526 SLC39A6Q13433 755 aa23.05■■□□□ 1.28
LST1-220ENST00000464526 SPINK5Q9NQ38 1064 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms