RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
PTPN12-210ENST00000464313 DHX9Q08211 1270 aaKnown RBP8.65□□□□□ -1.02
PTPN12-210ENST00000464313 SENP3-EIF4A1A0A087X0R7 540 aa8.64□□□□□ -1.03
PTPN12-210ENST00000464313 RAB15P59190 212 aa8.64□□□□□ -1.03
PTPN12-210ENST00000464313 SH3D19Q5HYK7 790 aa8.64□□□□□ -1.03
PTPN12-210ENST00000464313 RNF217Q8TC41 542 aa8.64□□□□□ -1.03
PTPN12-210ENST00000464313 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
PTPN12-210ENST00000464313 CDV3Q9UKY7 258 aaKnown RBP8.64□□□□□ -1.03
PTPN12-210ENST00000464313 FURINP09958 794 aa8.63□□□□□ -1.03
PTPN12-210ENST00000464313 GAS6Q14393 721 aa8.62□□□□□ -1.03
PTPN12-210ENST00000464313 NEDD1Q8NHV4 660 aa8.62□□□□□ -1.03
PTPN12-210ENST00000464313 FOXD4L5Q5VV16 416 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-210ENST00000464313 ZNF784Q8NCA9 323 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-210ENST00000464313 PROCA1Q8NCQ7 364 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-210ENST00000464313 ADAM32Q8TC27 787 aa8.61□□□□□ -1.03
PTPN12-210ENST00000464313 GOPCQ9HD26 462 aa8.61□□□□□ -1.03
PTPN12-210ENST00000464313 ADD1P35611 737 aaKnown RBP8.6□□□□□ -1.03
PTPN12-210ENST00000464313 PTK2Q05397 1052 aa8.6□□□□□ -1.03
PTPN12-210ENST00000464313 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
PTPN12-210ENST00000464313 EPS8L1Q8TE68 723 aa8.6□□□□□ -1.03
PTPN12-210ENST00000464313 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
PTPN12-210ENST00000464313 KRTAP4-12Q9BQ66 201 aa8.6□□□□□ -1.03
PTPN12-210ENST00000464313 CUEDC1Q9NWM3 386 aaPredicted RBP8.6□□□□□ -1.03
PTPN12-210ENST00000464313 ZC3H4Q9UPT8 1303 aaKnown RBP8.59□□□□□ -1.03
PTPN12-210ENST00000464313 ADH1AP07327 375 aa8.59□□□□□ -1.03
PTPN12-210ENST00000464313 ATP1B4Q9UN42 357 aaPredicted RBP8.59□□□□□ -1.03
PTPN12-210ENST00000464313 ERVH48-1M5A8F1 160 aa8.58□□□□□ -1.04
PTPN12-210ENST00000464313 LILRA1O75019 489 aa8.58□□□□□ -1.04
PTPN12-210ENST00000464313 KDF1Q8NAX2 398 aaPredicted RBP8.58□□□□□ -1.04
PTPN12-210ENST00000464313 KRBA1A5PL33 1030 aa8.57□□□□□ -1.04
PTPN12-210ENST00000464313 BCRP11274 1271 aa8.57□□□□□ -1.04
PTPN12-210ENST00000464313 PTGIRP43119 386 aa8.57□□□□□ -1.04
PTPN12-210ENST00000464313 AP1G2O75843 785 aa8.56□□□□□ -1.04
PTPN12-210ENST00000464313 RHOQP17081 205 aa8.56□□□□□ -1.04
PTPN12-210ENST00000464313 NBPF20Q3BBV1 942 aa8.56□□□□□ -1.04
PTPN12-210ENST00000464313 MBIPQ9NS73 344 aa8.56□□□□□ -1.04
PTPN12-210ENST00000464313 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.55□□□□□ -1.04
PTPN12-210ENST00000464313 HMX1Q9NP08 348 aaPredicted RBP8.55□□□□□ -1.04
PTPN12-210ENST00000464313 GPSM3Q9Y4H4 160 aa8.55□□□□□ -1.04
PTPN12-210ENST00000464313 IGF1RP08069 1367 aa8.54□□□□□ -1.04
PTPN12-210ENST00000464313 LYSMD3Q7Z3D4 306 aa8.54□□□□□ -1.04
PTPN12-210ENST00000464313 PRICKLE2Q7Z3G6 844 aa8.54□□□□□ -1.04
PTPN12-210ENST00000464313 DZIP3Q86Y13 1208 aaKnown RBP8.54□□□□□ -1.04
PTPN12-210ENST00000464313 CYLDQ9NQC7 956 aa8.54□□□□□ -1.04
PTPN12-210ENST00000464313 PPP2R2DQ66LE6 453 aa8.53□□□□□ -1.04
PTPN12-210ENST00000464313 GPR25O00155 361 aa8.52□□□□□ -1.05
PTPN12-210ENST00000464313 KRTAP9-9Q9BYP9 154 aa8.52□□□□□ -1.05
PTPN12-210ENST00000464313 KRTAP9-4Q9BYQ2 154 aa8.52□□□□□ -1.05
PTPN12-210ENST00000464313 BTBD11A6QL63 1104 aa8.51□□□□□ -1.05
PTPN12-210ENST00000464313 ESPNB1AK53 854 aa8.51□□□□□ -1.05
PTPN12-210ENST00000464313 ACDQ96AP0 544 aa8.51□□□□□ -1.05
PTPN12-210ENST00000464313 ZNF837Q96EG3 531 aaPredicted RBP8.51□□□□□ -1.05
PTPN12-210ENST00000464313 TIMELESSQ9UNS1 1208 aa8.51□□□□□ -1.05
PTPN12-210ENST00000464313 USP17L8P0C7I0 530 aa8.5□□□□□ -1.05
PTPN12-210ENST00000464313 RNF144AP50876 292 aaPredicted RBP8.49□□□□□ -1.05
PTPN12-210ENST00000464313 LRRC4BQ9NT99 713 aa8.49□□□□□ -1.05
PTPN12-210ENST00000464313 RFC5P40937 340 aa8.48□□□□□ -1.05
PTPN12-210ENST00000464313 DBN1Q16643 649 aa8.48□□□□□ -1.05
PTPN12-210ENST00000464313 RIPOR1Q6ZS17 1223 aa8.48□□□□□ -1.05
PTPN12-210ENST00000464313 ALYREFQ86V81 257 aaKnown RBP8.48□□□□□ -1.05
PTPN12-210ENST00000464313 MEN1O00255 615 aa8.47□□□□□ -1.05
PTPN12-210ENST00000464313 SNRPNP63162 240 aaKnown RBP8.47□□□□□ -1.05
PTPN12-210ENST00000464313 FOXR1Q6PIV2 292 aa8.47□□□□□ -1.05
PTPN12-210ENST00000464313 TRIM22Q8IYM9 498 aa8.47□□□□□ -1.05
PTPN12-210ENST00000464313 PNMA1Q8ND90 353 aa8.47□□□□□ -1.05
PTPN12-210ENST00000464313 ITGB7P26010 798 aa8.46□□□□□ -1.06
PTPN12-210ENST00000464313 ATP5J2-PTCD1G3V325 749 aa8.45□□□□□ -1.06
PTPN12-210ENST00000464313 GIGYF1O75420 1035 aaPredicted RBP8.45□□□□□ -1.06
PTPN12-210ENST00000464313 COL8A1P27658 744 aa8.45□□□□□ -1.06
PTPN12-210ENST00000464313 C14orf37Q86TY3 774 aa8.45□□□□□ -1.06
PTPN12-210ENST00000464313 GTPBP3Q969Y2 492 aaKnown RBP8.45□□□□□ -1.06
PTPN12-210ENST00000464313 GMCL1Q96IK5 515 aa8.45□□□□□ -1.06
PTPN12-210ENST00000464313 KRTAP4-8A0A0G2JLE6 195 aa8.44□□□□□ -1.06
PTPN12-210ENST00000464313 OIP5O43482 229 aa8.44□□□□□ -1.06
PTPN12-210ENST00000464313 POU4F2Q12837 409 aa8.44□□□□□ -1.06
PTPN12-210ENST00000464313 SEPT12Q8IYM1 358 aa8.44□□□□□ -1.06
PTPN12-210ENST00000464313 GAS2L1Q99501 681 aaPredicted RBP8.44□□□□□ -1.06
PTPN12-210ENST00000464313 TRIM34Q9BYJ4 488 aa8.44□□□□□ -1.06
PTPN12-210ENST00000464313 MKL2Q9ULH7 1088 aa8.44□□□□□ -1.06
PTPN12-210ENST00000464313 A0A1W2PRU2 124 aa8.43□□□□□ -1.06
PTPN12-210ENST00000464313 ZMYM1Q5SVZ6 1142 aa8.43□□□□□ -1.06
PTPN12-210ENST00000464313 PCDHB9Q9Y5E1 797 aa8.43□□□□□ -1.06
PTPN12-210ENST00000464313 MCM6Q14566 821 aa8.41□□□□□ -1.06
PTPN12-210ENST00000464313 SEMA6BQ9H3T3 888 aa8.41□□□□□ -1.06
PTPN12-210ENST00000464313 DYRK1BQ9Y463 629 aa8.41□□□□□ -1.06
PTPN12-210ENST00000464313 GPC1P35052 558 aa8.4□□□□□ -1.06
PTPN12-210ENST00000464313 SLC27A3Q5K4L6 730 aa8.4□□□□□ -1.06
PTPN12-210ENST00000464313 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
PTPN12-210ENST00000464313 C1QTNF9BB2RNN3 333 aa8.39□□□□□ -1.07
PTPN12-210ENST00000464313 NSFL1CQ9UNZ2 370 aaKnown RBP8.39□□□□□ -1.07
PTPN12-210ENST00000464313 ZBBXA8MT70 800 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 H7C1W4 665 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 FBXO45P0C2W1 286 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 MX2P20592 715 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 SCTRP47872 440 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 ERVK-9P63128 1117 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 FLIIQ13045 1269 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 TMEM259Q4ZIN3 620 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 CC2D2BQ6DHV5 1058 aa8.38□□□□□ -1.07
PTPN12-210ENST00000464313 NBPF10Q6P3W6 841 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms