RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 MSTNO14793 375 aa9.81□□□□□ -0.84
CD46-211ENST00000464082 ADAM23O75077 832 aa9.81□□□□□ -0.84
CD46-211ENST00000464082 DHX9Q08211 1270 aaKnown RBP9.81□□□□□ -0.84
CD46-211ENST00000464082 FOXD4L5Q5VV16 416 aaPredicted RBP9.81□□□□□ -0.84
CD46-211ENST00000464082 DCAF5Q96JK2 942 aa9.81□□□□□ -0.84
CD46-211ENST00000464082 CTDSPL2Q05D32 466 aa9.8□□□□□ -0.84
CD46-211ENST00000464082 PDXDC2PQ6P474 469 aa9.8□□□□□ -0.84
CD46-211ENST00000464082 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
CD46-211ENST00000464082 SPOCK3Q9BQ16 436 aa9.8□□□□□ -0.84
CD46-211ENST00000464082 OCSTAMPQ9BR26 566 aa9.8□□□□□ -0.84
CD46-211ENST00000464082 TMPRSS4Q9NRS4 437 aa9.8□□□□□ -0.84
CD46-211ENST00000464082 ZBTB33Q86T24 672 aa9.78□□□□□ -0.84
CD46-211ENST00000464082 KDF1Q8NAX2 398 aaPredicted RBP9.78□□□□□ -0.84
CD46-211ENST00000464082 FKBPLQ9UIM3 349 aa9.78□□□□□ -0.84
CD46-211ENST00000464082 ADD1P35611 737 aaKnown RBP9.77□□□□□ -0.85
CD46-211ENST00000464082 ZNF784Q8NCA9 323 aaPredicted RBP9.77□□□□□ -0.85
CD46-211ENST00000464082 LRRN4Q8WUT4 740 aa9.77□□□□□ -0.85
CD46-211ENST00000464082 CDV3Q9UKY7 258 aaKnown RBP9.77□□□□□ -0.85
CD46-211ENST00000464082 TOPBP1Q92547 1522 aa9.76□□□□□ -0.85
CD46-211ENST00000464082 PROCP04070 461 aa9.75□□□□□ -0.85
CD46-211ENST00000464082 ENAMQ9NRM1 1142 aa9.75□□□□□ -0.85
CD46-211ENST00000464082 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
CD46-211ENST00000464082 GPR25O00155 361 aa9.74□□□□□ -0.85
CD46-211ENST00000464082 LILRA1O75019 489 aa9.74□□□□□ -0.85
CD46-211ENST00000464082 ADH1AP07327 375 aa9.74□□□□□ -0.85
CD46-211ENST00000464082 CLK2P49760 499 aaKnown RBP9.74□□□□□ -0.85
CD46-211ENST00000464082 RAB15P59190 212 aa9.74□□□□□ -0.85
CD46-211ENST00000464082 LYSMD3Q7Z3D4 306 aa9.74□□□□□ -0.85
CD46-211ENST00000464082 RHOQP17081 205 aa9.73□□□□□ -0.85
CD46-211ENST00000464082 PTGIRP43119 386 aa9.73□□□□□ -0.85
CD46-211ENST00000464082 NR6A1Q15406 480 aa9.73□□□□□ -0.85
CD46-211ENST00000464082 ZNF837Q96EG3 531 aaPredicted RBP9.73□□□□□ -0.85
CD46-211ENST00000464082 AK7Q96M32 723 aa9.73□□□□□ -0.85
CD46-211ENST00000464082 POLR3EQ9NVU0 708 aa9.73□□□□□ -0.85
CD46-211ENST00000464082 TARBP1Q13395 1621 aaKnown RBP9.72□□□□□ -0.85
CD46-211ENST00000464082 PHF20L1A8MW92 1017 aa9.72□□□□□ -0.85
CD46-211ENST00000464082 PRICKLE2Q7Z3G6 844 aa9.72□□□□□ -0.85
CD46-211ENST00000464082 BEND7Q8N7W2 519 aaPredicted RBP9.72□□□□□ -0.85
CD46-211ENST00000464082 ADAM32Q8TC27 787 aa9.72□□□□□ -0.85
CD46-211ENST00000464082 MBIPQ9NS73 344 aa9.72□□□□□ -0.85
CD46-211ENST00000464082 IGF1RP08069 1367 aa9.72□□□□□ -0.85
CD46-211ENST00000464082 ERVH48-1M5A8F1 160 aa9.71□□□□□ -0.86
CD46-211ENST00000464082 DBN1Q16643 649 aa9.7□□□□□ -0.86
CD46-211ENST00000464082 FBXO31Q5XUX0 539 aaPredicted RBP9.7□□□□□ -0.86
CD46-211ENST00000464082 NEDD1Q8NHV4 660 aa9.7□□□□□ -0.86
CD46-211ENST00000464082 ACDQ96AP0 544 aa9.7□□□□□ -0.86
CD46-211ENST00000464082 ZNF608Q9ULD9 1512 aaPredicted RBP9.7□□□□□ -0.86
CD46-211ENST00000464082 BCRP11274 1271 aa9.69□□□□□ -0.86
CD46-211ENST00000464082 PTK2Q05397 1052 aa9.69□□□□□ -0.86
CD46-211ENST00000464082 PDE4DQ08499 809 aa9.69□□□□□ -0.86
CD46-211ENST00000464082 ABCC8Q09428 1581 aa9.69□□□□□ -0.86
CD46-211ENST00000464082 TRIM22Q8IYM9 498 aa9.69□□□□□ -0.86
CD46-211ENST00000464082 EIF4G3O43432 1585 aaKnown RBP9.68□□□□□ -0.86
CD46-211ENST00000464082 GALNT6Q8NCL4 622 aa9.68□□□□□ -0.86
CD46-211ENST00000464082 KRTAP4-8Q9BYQ9 185 aa9.68□□□□□ -0.86
CD46-211ENST00000464082 WDR97A6NE52 1622 aa9.67□□□□□ -0.86
CD46-211ENST00000464082 CUX1P39880 1505 aa9.67□□□□□ -0.86
CD46-211ENST00000464082 IFT140Q96RY7 1462 aa9.67□□□□□ -0.86
CD46-211ENST00000464082 RNF144AP50876 292 aaPredicted RBP9.67□□□□□ -0.86
CD46-211ENST00000464082 PODNQ7Z5L7 613 aa9.67□□□□□ -0.86
CD46-211ENST00000464082 POLA1P09884 1462 aaPredicted RBP9.66□□□□□ -0.86
CD46-211ENST00000464082 ZC3H4Q9UPT8 1303 aaKnown RBP9.66□□□□□ -0.86
CD46-211ENST00000464082 NBPF20Q3BBV1 942 aa9.66□□□□□ -0.86
CD46-211ENST00000464082 RIPOR1Q6ZS17 1223 aa9.66□□□□□ -0.86
CD46-211ENST00000464082 EPS8L1Q8TE68 723 aa9.65□□□□□ -0.86
CD46-211ENST00000464082 GTPBP3Q969Y2 492 aaKnown RBP9.65□□□□□ -0.86
CD46-211ENST00000464082 K7ELQ4 463 aaPredicted RBP9.64□□□□□ -0.87
CD46-211ENST00000464082 SUPT5HO00267 1087 aaKnown RBP9.64□□□□□ -0.87
CD46-211ENST00000464082 CYLDQ9NQC7 956 aa9.64□□□□□ -0.87
CD46-211ENST00000464082 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
CD46-211ENST00000464082 CHD1O14646 1710 aa9.64□□□□□ -0.87
CD46-211ENST00000464082 FOXR1Q6PIV2 292 aa9.63□□□□□ -0.87
CD46-211ENST00000464082 GMCL1Q96IK5 515 aa9.63□□□□□ -0.87
CD46-211ENST00000464082 FGD5Q6ZNL6 1462 aa9.62□□□□□ -0.87
CD46-211ENST00000464082 KRBA1A5PL33 1030 aa9.62□□□□□ -0.87
CD46-211ENST00000464082 ESPNB1AK53 854 aa9.62□□□□□ -0.87
CD46-211ENST00000464082 SNRPNP63162 240 aaKnown RBP9.62□□□□□ -0.87
CD46-211ENST00000464082 RAD54L2Q9Y4B4 1467 aa9.61□□□□□ -0.87
CD46-211ENST00000464082 DZIP3Q86Y13 1208 aaKnown RBP9.61□□□□□ -0.87
CD46-211ENST00000464082 Q8N3U1 123 aa9.61□□□□□ -0.87
CD46-211ENST00000464082 RSPH6AQ9H0K4 717 aa9.61□□□□□ -0.87
CD46-211ENST00000464082 BAG6P46379 1132 aa9.6□□□□□ -0.87
CD46-211ENST00000464082 POU4F2Q12837 409 aa9.6□□□□□ -0.87
CD46-211ENST00000464082 GAS2L1Q99501 681 aaPredicted RBP9.6□□□□□ -0.87
CD46-211ENST00000464082 BIVM-ERCC5R4GMW8 1640 aa9.6□□□□□ -0.87
CD46-211ENST00000464082 MEN1O00255 615 aa9.59□□□□□ -0.87
CD46-211ENST00000464082 OIP5O43482 229 aa9.59□□□□□ -0.87
CD46-211ENST00000464082 DYRK1BQ9Y463 629 aa9.59□□□□□ -0.87
CD46-211ENST00000464082 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.87
CD46-211ENST00000464082 PBRM1Q86U86 1689 aa9.58□□□□□ -0.88
CD46-211ENST00000464082 ATP5J2-PTCD1G3V325 749 aa9.58□□□□□ -0.88
CD46-211ENST00000464082 FURINP09958 794 aa9.58□□□□□ -0.88
CD46-211ENST00000464082 MX2P20592 715 aa9.58□□□□□ -0.88
CD46-211ENST00000464082 LRRC4BQ9NT99 713 aa9.58□□□□□ -0.88
CD46-211ENST00000464082 PROCA1Q8NCQ7 364 aaPredicted RBP9.57□□□□□ -0.88
CD46-211ENST00000464082 TRERF1Q96PN7 1200 aa9.57□□□□□ -0.88
CD46-211ENST00000464082 HMX1Q9NP08 348 aaPredicted RBP9.57□□□□□ -0.88
CD46-211ENST00000464082 SYNJ1O43426 1573 aa9.57□□□□□ -0.88
CD46-211ENST00000464082 A0A1W2PRU2 124 aa9.56□□□□□ -0.88
CD46-211ENST00000464082 H7C1W4 665 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms