RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 SLFNL1Q499Z3 407 aa8.22□□□□□ -1.09
USP9X-204ENST00000463829 KCTD15Q96SI1 283 aaPredicted RBP8.22□□□□□ -1.09
USP9X-204ENST00000463829 PPP1R12CQ9BZL4 782 aa8.22□□□□□ -1.09
USP9X-204ENST00000463829 LORP23490 312 aaPredicted RBP8.21□□□□□ -1.1
USP9X-204ENST00000463829 NFATC2IPQ8NCF5 419 aa8.21□□□□□ -1.1
USP9X-204ENST00000463829 UCN2Q96RP3 112 aa8.21□□□□□ -1.1
USP9X-204ENST00000463829 TFIP11Q9UBB9 837 aaKnown RBP8.21□□□□□ -1.1
USP9X-204ENST00000463829 DNMT3LQ9UJW3 386 aa8.21□□□□□ -1.1
USP9X-204ENST00000463829 PALM3A6NDB9 673 aaPredicted RBP8.2□□□□□ -1.1
USP9X-204ENST00000463829 RNF20Q5VTR2 975 aa8.2□□□□□ -1.1
USP9X-204ENST00000463829 RNF135Q8IUD6 432 aa8.2□□□□□ -1.1
USP9X-204ENST00000463829 PHTF2Q8N3S3 785 aa8.2□□□□□ -1.1
USP9X-204ENST00000463829 FIGNL2A6NMB9 653 aa8.19□□□□□ -1.1
USP9X-204ENST00000463829 ATP9BO43861 1147 aa8.19□□□□□ -1.1
USP9X-204ENST00000463829 GIGYF1O75420 1035 aaPredicted RBP8.19□□□□□ -1.1
USP9X-204ENST00000463829 TBC1D9Q6ZT07 1266 aa8.19□□□□□ -1.1
USP9X-204ENST00000463829 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
USP9X-204ENST00000463829 PIK3CDO00329 1044 aa8.18□□□□□ -1.1
USP9X-204ENST00000463829 SKIP12755 728 aa8.18□□□□□ -1.1
USP9X-204ENST00000463829 CBLBQ13191 982 aa8.18□□□□□ -1.1
USP9X-204ENST00000463829 CFAP70Q5T0N1 1121 aa8.18□□□□□ -1.1
USP9X-204ENST00000463829 Q6ZVU0 165 aa8.18□□□□□ -1.1
USP9X-204ENST00000463829 CCDC125Q86Z20 511 aa8.18□□□□□ -1.1
USP9X-204ENST00000463829 ESPNB1AK53 854 aa8.17□□□□□ -1.1
USP9X-204ENST00000463829 SPINT1O43278 529 aa8.17□□□□□ -1.1
USP9X-204ENST00000463829 LMOD1P29536 600 aaPredicted RBP8.17□□□□□ -1.1
USP9X-204ENST00000463829 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
USP9X-204ENST00000463829 TRIM52Q96A61 297 aa8.17□□□□□ -1.1
USP9X-204ENST00000463829 LZTS3O60299 673 aaPredicted RBP8.16□□□□□ -1.1
USP9X-204ENST00000463829 RFX1P22670 979 aa8.16□□□□□ -1.1
USP9X-204ENST00000463829 PTSQ03393 145 aa8.16□□□□□ -1.1
USP9X-204ENST00000463829 CHIC2Q9UKJ5 165 aa8.16□□□□□ -1.1
USP9X-204ENST00000463829 MAFBQ9Y5Q3 323 aaPredicted RBP8.16□□□□□ -1.1
USP9X-204ENST00000463829 PLPP7Q8NBV4 271 aa8.15□□□□□ -1.1
USP9X-204ENST00000463829 USP17L5A8MUK1 530 aa8.14□□□□□ -1.11
USP9X-204ENST00000463829 PPP1R15AO75807 674 aaPredicted RBP8.14□□□□□ -1.11
USP9X-204ENST00000463829 RELBQ01201 579 aa8.14□□□□□ -1.11
USP9X-204ENST00000463829 INTS6LQ5JSJ4 861 aaKnown RBP8.14□□□□□ -1.11
USP9X-204ENST00000463829 PLEKHM2Q8IWE5 1019 aa8.14□□□□□ -1.11
USP9X-204ENST00000463829 ARXQ96QS3 562 aa8.14□□□□□ -1.11
USP9X-204ENST00000463829 DOLKQ9UPQ8 538 aa8.14□□□□□ -1.11
USP9X-204ENST00000463829 RAB15P59190 212 aa8.13□□□□□ -1.11
USP9X-204ENST00000463829 TSGA10IPQ3SY00 556 aa8.13□□□□□ -1.11
USP9X-204ENST00000463829 CCDC155Q8N6L0 562 aa8.13□□□□□ -1.11
USP9X-204ENST00000463829 PBXIP1Q96AQ6 731 aa8.13□□□□□ -1.11
USP9X-204ENST00000463829 CCDC85AQ96PX6 553 aaPredicted RBP8.13□□□□□ -1.11
USP9X-204ENST00000463829 POLMQ9NP87 494 aaPredicted RBP8.13□□□□□ -1.11
USP9X-204ENST00000463829 ACIN1Q9UKV3 1341 aaKnown RBP8.12□□□□□ -1.11
USP9X-204ENST00000463829 USP17L3A6NCW0 530 aa8.12□□□□□ -1.11
USP9X-204ENST00000463829 USP17L4A6NCW7 530 aa8.12□□□□□ -1.11
USP9X-204ENST00000463829 EML3Q32P44 896 aa8.12□□□□□ -1.11
USP9X-204ENST00000463829 USP17L2Q6R6M4 530 aa8.12□□□□□ -1.11
USP9X-204ENST00000463829 USP17L1Q7RTZ2 530 aa8.12□□□□□ -1.11
USP9X-204ENST00000463829 DEPDC4Q8N2C3 294 aa8.12□□□□□ -1.11
USP9X-204ENST00000463829 AGBL1Q96MI9 1066 aa8.12□□□□□ -1.11
USP9X-204ENST00000463829 CNTNAP3BQ96NU0 1288 aa8.12□□□□□ -1.11
USP9X-204ENST00000463829 CNTNAP3Q9BZ76 1288 aa8.12□□□□□ -1.11
USP9X-204ENST00000463829 PCDHB11Q9Y5F2 797 aa8.12□□□□□ -1.11
USP9X-204ENST00000463829 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.11□□□□□ -1.11
USP9X-204ENST00000463829 ERVH48-1M5A8F1 160 aa8.11□□□□□ -1.11
USP9X-204ENST00000463829 SRPK2P78362 688 aaKnown RBP8.11□□□□□ -1.11
USP9X-204ENST00000463829 USP4Q13107 963 aa8.11□□□□□ -1.11
USP9X-204ENST00000463829 NCOA4Q13772 614 aa8.11□□□□□ -1.11
USP9X-204ENST00000463829 NANOS1Q8WY41 292 aaKnown RBP8.11□□□□□ -1.11
USP9X-204ENST00000463829 VRTNQ9H8Y1 702 aa8.11□□□□□ -1.11
USP9X-204ENST00000463829 SV2AQ7L0J3 742 aa8.1□□□□□ -1.11
USP9X-204ENST00000463829 SIRT1Q96EB6 747 aa8.1□□□□□ -1.11
USP9X-204ENST00000463829 INSM2Q96T92 566 aaPredicted RBP8.1□□□□□ -1.11
USP9X-204ENST00000463829 COL25A1Q9BXS0 654 aaPredicted RBP8.1□□□□□ -1.11
USP9X-204ENST00000463829 ZNF395Q9H8N7 513 aaPredicted RBP8.1□□□□□ -1.11
USP9X-204ENST00000463829 MKRN1Q9UHC7 482 aaKnown RBP8.1□□□□□ -1.11
USP9X-204ENST00000463829 CDC14CA4D256 554 aa8.09□□□□□ -1.11
USP9X-204ENST00000463829 SLC35F4A4IF30 521 aa8.09□□□□□ -1.11
USP9X-204ENST00000463829 CTSOP43234 321 aaPredicted RBP8.09□□□□□ -1.11
USP9X-204ENST00000463829 OXLD1Q5BKU9 147 aa8.09□□□□□ -1.11
USP9X-204ENST00000463829 KANK4Q5T7N3 995 aaPredicted RBP8.09□□□□□ -1.11
USP9X-204ENST00000463829 HOMEZQ8IX15 550 aa8.09□□□□□ -1.11
USP9X-204ENST00000463829 GPR161Q8N6U8 529 aaKnown RBP8.09□□□□□ -1.11
USP9X-204ENST00000463829 CDCA7Q9BWT1 371 aaPredicted RBP8.09□□□□□ -1.11
USP9X-204ENST00000463829 TMPRSS4Q9NRS4 437 aa8.09□□□□□ -1.11
USP9X-204ENST00000463829 NOD1Q9Y239 953 aa8.09□□□□□ -1.11
USP9X-204ENST00000463829 ATP5J2-PTCD1G3V325 749 aa8.08□□□□□ -1.12
USP9X-204ENST00000463829 VWA5B2Q8N398 1253 aa8.08□□□□□ -1.12
USP9X-204ENST00000463829 ESF1Q9H501 851 aaKnown RBP8.08□□□□□ -1.12
USP9X-204ENST00000463829 MYCP01106 439 aaPredicted RBP8.07□□□□□ -1.12
USP9X-204ENST00000463829 ADH1AP07327 375 aa8.07□□□□□ -1.12
USP9X-204ENST00000463829 ITGA6P23229 1130 aa8.07□□□□□ -1.12
USP9X-204ENST00000463829 KCNMA1Q12791 1236 aa8.07□□□□□ -1.12
USP9X-204ENST00000463829 CDCA8Q53HL2 280 aa8.07□□□□□ -1.12
USP9X-204ENST00000463829 TRIM50Q86XT4 487 aa8.07□□□□□ -1.12
USP9X-204ENST00000463829 ZNF784Q8NCA9 323 aaPredicted RBP8.07□□□□□ -1.12
USP9X-204ENST00000463829 RNF225M0QZC1 329 aaPredicted RBP8.06□□□□□ -1.12
USP9X-204ENST00000463829 ATG7O95352 703 aa8.06□□□□□ -1.12
USP9X-204ENST00000463829 PTGIRP43119 386 aa8.06□□□□□ -1.12
USP9X-204ENST00000463829 RNF217Q8TC41 542 aa8.06□□□□□ -1.12
USP9X-204ENST00000463829 RASA1P20936 1047 aa8.05□□□□□ -1.12
USP9X-204ENST00000463829 ATP1A2P50993 1020 aa8.05□□□□□ -1.12
USP9X-204ENST00000463829 ERVK-9P63128 1117 aa8.05□□□□□ -1.12
USP9X-204ENST00000463829 KRT76Q01546 638 aa8.05□□□□□ -1.12
USP9X-204ENST00000463829 CC2D2BQ6DHV5 1058 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms