RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 CDCA7Q9BWT1 371 aaPredicted RBP11.56□□□□□ -0.56
GARNL3-212ENST00000463005 COL5A2P05997 1499 aaPredicted RBP11.56□□□□□ -0.56
GARNL3-212ENST00000463005 RAB3GAP2Q9H2M9 1393 aa11.55□□□□□ -0.56
GARNL3-212ENST00000463005 PEAK1Q9H792 1746 aa11.55□□□□□ -0.56
GARNL3-212ENST00000463005 KIAA1210Q9ULL0 1709 aa11.55□□□□□ -0.56
GARNL3-212ENST00000463005 CHD4Q14839 1912 aa11.55□□□□□ -0.56
GARNL3-212ENST00000463005 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
GARNL3-212ENST00000463005 EVX2Q03828 476 aa11.54□□□□□ -0.56
GARNL3-212ENST00000463005 MS4A4AQ96JQ5 239 aa11.54□□□□□ -0.56
GARNL3-212ENST00000463005 CASZ1Q86V15 1759 aa11.54□□□□□ -0.56
GARNL3-212ENST00000463005 BCL9O00512 1426 aa11.53□□□□□ -0.56
GARNL3-212ENST00000463005 NLRP6P59044 892 aa11.53□□□□□ -0.56
GARNL3-212ENST00000463005 SRPK2P78362 688 aaKnown RBP11.53□□□□□ -0.56
GARNL3-212ENST00000463005 TOM1L2Q6ZVM7 507 aa11.53□□□□□ -0.56
GARNL3-212ENST00000463005 AKAP12Q02952 1782 aa11.52□□□□□ -0.57
GARNL3-212ENST00000463005 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.57
GARNL3-212ENST00000463005 LRRC37A3O60309 1634 aa11.51□□□□□ -0.57
GARNL3-212ENST00000463005 ANO8Q9HCE9 1232 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-212ENST00000463005 STK32BQ9NY57 414 aa11.51□□□□□ -0.57
GARNL3-212ENST00000463005 COL18A1P39060 1754 aa11.51□□□□□ -0.57
GARNL3-212ENST00000463005 ZBTB7CA1YPR0 619 aa11.5□□□□□ -0.57
GARNL3-212ENST00000463005 EXOC5O00471 708 aa11.5□□□□□ -0.57
GARNL3-212ENST00000463005 SOX12O15370 315 aa11.5□□□□□ -0.57
GARNL3-212ENST00000463005 PTGER2P43116 358 aa11.5□□□□□ -0.57
GARNL3-212ENST00000463005 SLC15A2Q16348 729 aa11.5□□□□□ -0.57
GARNL3-212ENST00000463005 MARCH10Q8NA82 808 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-212ENST00000463005 ZNF784Q8NCA9 323 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-212ENST00000463005 SYT17Q9BSW7 474 aa11.5□□□□□ -0.57
GARNL3-212ENST00000463005 WNK3Q9BYP7 1800 aa11.5□□□□□ -0.57
GARNL3-212ENST00000463005 WDR17Q8IZU2 1322 aa11.5□□□□□ -0.57
GARNL3-212ENST00000463005 KAT6BQ8WYB5 2073 aa11.49□□□□□ -0.57
GARNL3-212ENST00000463005 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
GARNL3-212ENST00000463005 ZBTB7AO95365 584 aa11.49□□□□□ -0.57
GARNL3-212ENST00000463005 TRIM26Q12899 539 aaPredicted RBP11.49□□□□□ -0.57
GARNL3-212ENST00000463005 TXNRD1Q16881 649 aa11.49□□□□□ -0.57
GARNL3-212ENST00000463005 KCNH5Q8NCM2 988 aa11.49□□□□□ -0.57
GARNL3-212ENST00000463005 CARD10Q9BWT7 1032 aa11.49□□□□□ -0.57
GARNL3-212ENST00000463005 CABP1Q9NZU7 370 aa11.49□□□□□ -0.57
GARNL3-212ENST00000463005 CENPJQ9HC77 1338 aaPredicted RBP11.49□□□□□ -0.57
GARNL3-212ENST00000463005 SLIT3O75094 1523 aa11.49□□□□□ -0.57
GARNL3-212ENST00000463005 RGPD5Q99666 1765 aa11.49□□□□□ -0.57
GARNL3-212ENST00000463005 NBPF1Q3BBV0 1214 aa11.48□□□□□ -0.57
GARNL3-212ENST00000463005 PTF1AQ7RTS3 328 aa11.48□□□□□ -0.57
GARNL3-212ENST00000463005 KCNV2Q8TDN2 545 aa11.48□□□□□ -0.57
GARNL3-212ENST00000463005 PDGFDQ9GZP0 370 aaPredicted RBP11.48□□□□□ -0.57
GARNL3-212ENST00000463005 MTFR1LQ9H019 292 aa11.48□□□□□ -0.57
GARNL3-212ENST00000463005 AXIN2Q9Y2T1 843 aa11.48□□□□□ -0.57
GARNL3-212ENST00000463005 USP6P35125 1406 aa11.48□□□□□ -0.57
GARNL3-212ENST00000463005 MYOM1P52179 1685 aa11.47□□□□□ -0.57
GARNL3-212ENST00000463005 ARHGEF25Q86VW2 580 aa11.47□□□□□ -0.57
GARNL3-212ENST00000463005 FHDC1Q9C0D6 1143 aaPredicted RBP11.47□□□□□ -0.57
GARNL3-212ENST00000463005 HAX1O00165 279 aa11.46□□□□□ -0.57
GARNL3-212ENST00000463005 CSB-PGBD3P0DP91 1061 aa11.46□□□□□ -0.57
GARNL3-212ENST00000463005 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
GARNL3-212ENST00000463005 CCDC7Q96M83 1385 aa11.45□□□□□ -0.58
GARNL3-212ENST00000463005 TTLL13PA6NNM8 815 aa11.45□□□□□ -0.58
GARNL3-212ENST00000463005 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
GARNL3-212ENST00000463005 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
GARNL3-212ENST00000463005 EVC2Q86UK5 1308 aa11.44□□□□□ -0.58
GARNL3-212ENST00000463005 PIK3C2AO00443 1686 aa11.44□□□□□ -0.58
GARNL3-212ENST00000463005 QRICH2Q9H0J4 1663 aa11.44□□□□□ -0.58
GARNL3-212ENST00000463005 C1QTNF8P60827 252 aa11.44□□□□□ -0.58
GARNL3-212ENST00000463005 ARXQ96QS3 562 aa11.44□□□□□ -0.58
GARNL3-212ENST00000463005 CPSF1Q10570 1443 aaKnown RBP11.43□□□□□ -0.58
GARNL3-212ENST00000463005 TTC21BQ7Z4L5 1316 aa11.43□□□□□ -0.58
GARNL3-212ENST00000463005 TTC21AQ8NDW8 1320 aa11.43□□□□□ -0.58
GARNL3-212ENST00000463005 MAP3K5Q99683 1374 aa11.42□□□□□ -0.58
GARNL3-212ENST00000463005 SENP3-EIF4A1A0A087X0R7 540 aa11.42□□□□□ -0.58
GARNL3-212ENST00000463005 SLC16A10Q8TF71 515 aa11.42□□□□□ -0.58
GARNL3-212ENST00000463005 NHSQ6T4R5 1651 aa11.42□□□□□ -0.58
GARNL3-212ENST00000463005 MKRN3Q13064 507 aaKnown RBP11.41□□□□□ -0.58
GARNL3-212ENST00000463005 TRPM1Q7Z4N2 1603 aa11.41□□□□□ -0.58
GARNL3-212ENST00000463005 ABCC6O95255 1503 aa11.4□□□□□ -0.58
GARNL3-212ENST00000463005 TNS2Q63HR2 1409 aa11.4□□□□□ -0.58
GARNL3-212ENST00000463005 TIE1P35590 1138 aa11.39□□□□□ -0.59
GARNL3-212ENST00000463005 GPR162Q16538 588 aa11.39□□□□□ -0.59
GARNL3-212ENST00000463005 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
GARNL3-212ENST00000463005 BTAF1O14981 1849 aa11.39□□□□□ -0.59
GARNL3-212ENST00000463005 QSER1Q2KHR3 1735 aa11.38□□□□□ -0.59
GARNL3-212ENST00000463005 IL2RBP14784 551 aa11.38□□□□□ -0.59
GARNL3-212ENST00000463005 ACSBG1Q96GR2 724 aa11.38□□□□□ -0.59
GARNL3-212ENST00000463005 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
GARNL3-212ENST00000463005 NFAT5O94916 1531 aa11.37□□□□□ -0.59
GARNL3-212ENST00000463005 POLD1P28340 1107 aa11.37□□□□□ -0.59
GARNL3-212ENST00000463005 SLC27A3Q5K4L6 730 aa11.37□□□□□ -0.59
GARNL3-212ENST00000463005 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
GARNL3-212ENST00000463005 NLRP2Q9NX02 1062 aa11.37□□□□□ -0.59
GARNL3-212ENST00000463005 PAPPAQ13219 1627 aa11.37□□□□□ -0.59
GARNL3-212ENST00000463005 KTN1Q86UP2 1357 aaKnown RBP11.37□□□□□ -0.59
GARNL3-212ENST00000463005 COL24A1Q17RW2 1714 aa11.37□□□□□ -0.59
GARNL3-212ENST00000463005 GIGYF1O75420 1035 aaPredicted RBP11.36□□□□□ -0.59
GARNL3-212ENST00000463005 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
GARNL3-212ENST00000463005 ERBB3P21860 1342 aa11.35□□□□□ -0.59
GARNL3-212ENST00000463005 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
GARNL3-212ENST00000463005 LARP6Q9BRS8 491 aaKnown RBP11.35□□□□□ -0.59
GARNL3-212ENST00000463005 LRRC4BQ9NT99 713 aa11.35□□□□□ -0.59
GARNL3-212ENST00000463005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.59
GARNL3-212ENST00000463005 LTN1O94822 1766 aa11.35□□□□□ -0.59
GARNL3-212ENST00000463005 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
GARNL3-212ENST00000463005 USP54Q70EL1 1684 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms