RNA–Protein interactions for RNA: ENST00000462813.1

DCTN1-216, Transcript of dynactin subunit 1, humanhuman

TSL 1 (best)

Gene DCTN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN1-216ENST00000462813 RAPGEF4Q8WZA2 1011 aa23.9■■□□□ 1.42
DCTN1-216ENST00000462813 HMOX1P09601 288 aa23.88■■□□□ 1.41
DCTN1-216ENST00000462813 TATP17735 454 aaPredicted RBP23.88■■□□□ 1.41
DCTN1-216ENST00000462813 CCDC184Q52MB2 194 aa23.88■■□□□ 1.41
DCTN1-216ENST00000462813 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
DCTN1-216ENST00000462813 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
DCTN1-216ENST00000462813 DDB1Q16531 1140 aa23.86■■□□□ 1.41
DCTN1-216ENST00000462813 DOT1LQ8TEK3 1739 aa23.86■■□□□ 1.41
DCTN1-216ENST00000462813 ITGB4P16144 1822 aa23.84■■□□□ 1.41
DCTN1-216ENST00000462813 SCN11AQ9UI33 1791 aa23.84■■□□□ 1.41
DCTN1-216ENST00000462813 PLEKHG2Q9H7P9 1386 aa23.84■■□□□ 1.41
DCTN1-216ENST00000462813 MRS2Q9HD23 443 aa23.84■■□□□ 1.41
DCTN1-216ENST00000462813 EXOC5O00471 708 aa23.83■■□□□ 1.41
DCTN1-216ENST00000462813 TOGARAM1Q9Y4F4 1720 aa23.81■■□□□ 1.4
DCTN1-216ENST00000462813 WDR43Q15061 677 aaKnown RBP eCLIP23.81■■□□□ 1.4
DCTN1-216ENST00000462813 KRT27Q7Z3Y8 459 aa23.81■■□□□ 1.4
DCTN1-216ENST00000462813 ZCRB1Q8TBF4 217 aaKnown RBP23.81■■□□□ 1.4
DCTN1-216ENST00000462813 RSPH6AQ9H0K4 717 aa23.81■■□□□ 1.4
DCTN1-216ENST00000462813 PDE3BQ13370 1112 aa23.8■■□□□ 1.4
DCTN1-216ENST00000462813 MIER1Q8N108 512 aa23.8■■□□□ 1.4
DCTN1-216ENST00000462813 EP400Q96L91 3159 aa23.78■■□□□ 1.4
DCTN1-216ENST00000462813 FCHSD2O94868 740 aa23.78■■□□□ 1.4
DCTN1-216ENST00000462813 PRKAR2BP31323 418 aa23.78■■□□□ 1.4
DCTN1-216ENST00000462813 ILDR2Q71H61 639 aa23.78■■□□□ 1.4
DCTN1-216ENST00000462813 SPG7Q9UQ90 795 aa23.78■■□□□ 1.4
DCTN1-216ENST00000462813 NHSQ6T4R5 1651 aa23.78■■□□□ 1.4
DCTN1-216ENST00000462813 PCDH11XQ9BZA7 1347 aa23.78■■□□□ 1.4
DCTN1-216ENST00000462813 PCDH11YQ9BZA8 1340 aa23.78■■□□□ 1.4
DCTN1-216ENST00000462813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.77■■□□□ 1.4
DCTN1-216ENST00000462813 TNS1Q9HBL0 1735 aaKnown RBP23.76■■□□□ 1.39
DCTN1-216ENST00000462813 CCER2I3L3R5 266 aa23.76■■□□□ 1.39
DCTN1-216ENST00000462813 PLEKHO1Q53GL0 409 aaPredicted RBP23.76■■□□□ 1.39
DCTN1-216ENST00000462813 MARCH10Q8NA82 808 aaPredicted RBP23.76■■□□□ 1.39
DCTN1-216ENST00000462813 AMOTQ4VCS5 1084 aa23.75■■□□□ 1.39
DCTN1-216ENST00000462813 FAM182BQ5T319 152 aa23.75■■□□□ 1.39
DCTN1-216ENST00000462813 DDX54Q8TDD1 881 aaKnown RBP23.75■■□□□ 1.39
DCTN1-216ENST00000462813 ADAMTS7Q9UKP4 1686 aa23.74■■□□□ 1.39
DCTN1-216ENST00000462813 ADAMTS8Q9UP79 889 aa23.74■■□□□ 1.39
DCTN1-216ENST00000462813 BTAF1O14981 1849 aa23.74■■□□□ 1.39
DCTN1-216ENST00000462813 PNISRQ8TF01 805 aaKnown RBP23.73■■□□□ 1.39
DCTN1-216ENST00000462813 PNNQ9H307 717 aaKnown RBP23.73■■□□□ 1.39
DCTN1-216ENST00000462813 CYP27B1O15528 508 aa23.72■■□□□ 1.39
DCTN1-216ENST00000462813 ZNF530Q6P9A1 599 aaPredicted RBP23.72■■□□□ 1.39
DCTN1-216ENST00000462813 PLEKHF1Q96S99 279 aa23.72■■□□□ 1.39
DCTN1-216ENST00000462813 SIPA1L3O60292 1781 aaPredicted RBP23.72■■□□□ 1.39
DCTN1-216ENST00000462813 PHACTR3Q96KR7 559 aa23.71■■□□□ 1.39
DCTN1-216ENST00000462813 BCL9O00512 1426 aa23.7■■□□□ 1.38
DCTN1-216ENST00000462813 NEFMP07197 916 aa23.7■■□□□ 1.38
DCTN1-216ENST00000462813 MTHFSDQ2M296 383 aaKnown RBP23.7■■□□□ 1.38
DCTN1-216ENST00000462813 MAPK8IP3Q9UPT6 1336 aa23.69■■□□□ 1.38
DCTN1-216ENST00000462813 PHKG2P15735 406 aa23.69■■□□□ 1.38
DCTN1-216ENST00000462813 CCDC146Q8IYE0 955 aa23.69■■□□□ 1.38
DCTN1-216ENST00000462813 IFNL2Q8IZJ0 200 aa23.69■■□□□ 1.38
DCTN1-216ENST00000462813 C1orf141Q5JVX7 400 aa23.68■■□□□ 1.38
DCTN1-216ENST00000462813 GAS2L2Q8NHY3 880 aa23.68■■□□□ 1.38
DCTN1-216ENST00000462813 FAM196AQ6ZSG2 479 aa23.67■■□□□ 1.38
DCTN1-216ENST00000462813 FAM9BQ8IZU0 186 aa23.66■■□□□ 1.38
DCTN1-216ENST00000462813 RUNDC1Q96C34 613 aa23.66■■□□□ 1.38
DCTN1-216ENST00000462813 AKAP4Q5JQC9 854 aa23.65■■□□□ 1.38
DCTN1-216ENST00000462813 KDM6AO15550 1401 aaPredicted RBP23.65■■□□□ 1.38
DCTN1-216ENST00000462813 MAP3K5Q99683 1374 aa23.65■■□□□ 1.38
DCTN1-216ENST00000462813 NKX1-1Q15270 411 aaPredicted RBP23.64■■□□□ 1.37
DCTN1-216ENST00000462813 RGPD3A6NKT7 1758 aaPredicted RBP23.63■■□□□ 1.37
DCTN1-216ENST00000462813 RGPD4Q7Z3J3 1758 aa23.63■■□□□ 1.37
DCTN1-216ENST00000462813 HSP90AB1P08238 724 aaKnown RBP23.62■■□□□ 1.37
DCTN1-216ENST00000462813 NFE2L2Q16236 605 aa23.62■■□□□ 1.37
DCTN1-216ENST00000462813 ACSBG1Q96GR2 724 aa23.61■■□□□ 1.37
DCTN1-216ENST00000462813 LY75O60449 1722 aa23.61■■□□□ 1.37
DCTN1-216ENST00000462813 PAPPAQ13219 1627 aa23.6■■□□□ 1.37
DCTN1-216ENST00000462813 GNAT3A8MTJ3 354 aa23.6■■□□□ 1.37
DCTN1-216ENST00000462813 DCAF5Q96JK2 942 aa23.6■■□□□ 1.37
DCTN1-216ENST00000462813 MRC1P22897 1456 aa23.6■■□□□ 1.37
DCTN1-216ENST00000462813 MPRIPQ6WCQ1 1025 aa23.59■■□□□ 1.37
DCTN1-216ENST00000462813 TRIM37O94972 964 aa23.58■■□□□ 1.37
DCTN1-216ENST00000462813 TMPOP42166 694 aaKnown RBP23.58■■□□□ 1.37
DCTN1-216ENST00000462813 UBR2Q8IWV8 1755 aa23.56■■□□□ 1.36
DCTN1-216ENST00000462813 RNMTO43148 476 aaKnown RBP23.56■■□□□ 1.36
DCTN1-216ENST00000462813 KCNQ2O43526 872 aa23.56■■□□□ 1.36
DCTN1-216ENST00000462813 RRP7AQ9Y3A4 280 aaKnown RBP23.56■■□□□ 1.36
DCTN1-216ENST00000462813 KDM3BQ7LBC6 1761 aa23.55■■□□□ 1.36
DCTN1-216ENST00000462813 APAF1O14727 1248 aa23.55■■□□□ 1.36
DCTN1-216ENST00000462813 PRIM1P49642 420 aaKnown RBP23.55■■□□□ 1.36
DCTN1-216ENST00000462813 PTF1AQ7RTS3 328 aa23.55■■□□□ 1.36
DCTN1-216ENST00000462813 SYTL4Q96C24 671 aaPredicted RBP23.55■■□□□ 1.36
DCTN1-216ENST00000462813 LGR6Q9HBX8 967 aa23.55■■□□□ 1.36
DCTN1-216ENST00000462813 ERVV-2B6SEH9 535 aa23.54■■□□□ 1.36
DCTN1-216ENST00000462813 RIPK4P57078 832 aa23.54■■□□□ 1.36
DCTN1-216ENST00000462813 NEUROD2Q15784 382 aa23.54■■□□□ 1.36
DCTN1-216ENST00000462813 RTF1Q92541 710 aaKnown RBP23.54■■□□□ 1.36
DCTN1-216ENST00000462813 BCL11BQ9C0K0 894 aaPredicted RBP23.54■■□□□ 1.36
DCTN1-216ENST00000462813 TAF1LQ8IZX4 1826 aa23.54■■□□□ 1.36
DCTN1-216ENST00000462813 RREB1Q92766 1687 aa23.54■■□□□ 1.36
DCTN1-216ENST00000462813 CEMIPQ8WUJ3 1361 aa23.53■■□□□ 1.36
DCTN1-216ENST00000462813 HTATSF1O43719 755 aaKnown RBP23.53■■□□□ 1.36
DCTN1-216ENST00000462813 MCM10Q7L590 875 aa23.52■■□□□ 1.36
DCTN1-216ENST00000462813 IL17REQ8NFR9 667 aa23.52■■□□□ 1.36
DCTN1-216ENST00000462813 UPF1Q92900 1129 aaKnown RBP eCLIP23.52■■□□□ 1.36
DCTN1-216ENST00000462813 DCTN1Q14203 1278 aa23.51■■□□□ 1.35
DCTN1-216ENST00000462813 TMOD3Q9NYL9 352 aa23.51■■□□□ 1.35
DCTN1-216ENST00000462813 SENP3-EIF4A1A0A087X0R7 540 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms