RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TRMT44Q8IYL2 757 aaKnown RBP5.65□□□□□ -1.5
HDAC6-212ENST00000461608 ARMC2Q8NEN0 867 aa5.65□□□□□ -1.5
HDAC6-212ENST00000461608 NEDD1Q8NHV4 660 aa5.65□□□□□ -1.5
HDAC6-212ENST00000461608 PGPEP1Q9NXJ5 209 aa5.65□□□□□ -1.5
HDAC6-212ENST00000461608 ZNF777Q9ULD5 760 aaPredicted RBP5.65□□□□□ -1.5
HDAC6-212ENST00000461608 FIGNL2A6NMB9 653 aa5.64□□□□□ -1.51
HDAC6-212ENST00000461608 K7ELQ4 463 aaPredicted RBP5.64□□□□□ -1.51
HDAC6-212ENST00000461608 CBLBQ13191 982 aa5.64□□□□□ -1.51
HDAC6-212ENST00000461608 FOXR1Q6PIV2 292 aa5.64□□□□□ -1.51
HDAC6-212ENST00000461608 VASH1Q7L8A9 365 aaPredicted RBP5.64□□□□□ -1.51
HDAC6-212ENST00000461608 VWA5B2Q8N398 1253 aa5.64□□□□□ -1.51
HDAC6-212ENST00000461608 ZNF592Q92610 1267 aa5.64□□□□□ -1.51
HDAC6-212ENST00000461608 MAP4K5Q9Y4K4 846 aa5.64□□□□□ -1.51
HDAC6-212ENST00000461608 ZC3H4Q9UPT8 1303 aaKnown RBP5.64□□□□□ -1.51
HDAC6-212ENST00000461608 ARHGEF15O94989 841 aa5.63□□□□□ -1.51
HDAC6-212ENST00000461608 ITGA6P23229 1130 aa5.63□□□□□ -1.51
HDAC6-212ENST00000461608 PLA2G4EQ3MJ16 856 aa5.63□□□□□ -1.51
HDAC6-212ENST00000461608 EPS8L1Q8TE68 723 aa5.63□□□□□ -1.51
HDAC6-212ENST00000461608 GLMNQ92990 594 aa5.63□□□□□ -1.51
HDAC6-212ENST00000461608 CALR3Q96L12 384 aaKnown RBP5.63□□□□□ -1.51
HDAC6-212ENST00000461608 SPOCK3Q9BQ16 436 aa5.63□□□□□ -1.51
HDAC6-212ENST00000461608 TRIM34Q9BYJ4 488 aa5.63□□□□□ -1.51
HDAC6-212ENST00000461608 HMX1Q9NP08 348 aaPredicted RBP5.63□□□□□ -1.51
HDAC6-212ENST00000461608 PPP1R15AO75807 674 aaPredicted RBP5.62□□□□□ -1.51
HDAC6-212ENST00000461608 ADAMTS2O95450 1211 aa5.62□□□□□ -1.51
HDAC6-212ENST00000461608 SRSF11Q05519 484 aaKnown RBP5.62□□□□□ -1.51
HDAC6-212ENST00000461608 PDE4CQ08493 712 aa5.62□□□□□ -1.51
HDAC6-212ENST00000461608 NR6A1Q15406 480 aa5.62□□□□□ -1.51
HDAC6-212ENST00000461608 NBPF14Q5TI25 921 aa5.62□□□□□ -1.51
HDAC6-212ENST00000461608 CCDC116Q8IYX3 515 aa5.62□□□□□ -1.51
HDAC6-212ENST00000461608 RNFT1Q5M7Z0 435 aa5.61□□□□□ -1.51
HDAC6-212ENST00000461608 PPP1R26Q5T8A7 1209 aaPredicted RBP5.61□□□□□ -1.51
HDAC6-212ENST00000461608 WHAMMQ8TF30 809 aa5.61□□□□□ -1.51
HDAC6-212ENST00000461608 PSMG3-AS1Q96PY0 264 aa5.61□□□□□ -1.51
HDAC6-212ENST00000461608 IRF5Q13568 498 aa5.6□□□□□ -1.51
HDAC6-212ENST00000461608 GPKOWQ92917 476 aaPredicted RBP eCLIP5.6□□□□□ -1.51
HDAC6-212ENST00000461608 DCAF5Q96JK2 942 aa5.6□□□□□ -1.51
HDAC6-212ENST00000461608 AGBL1Q96MI9 1066 aa5.6□□□□□ -1.51
HDAC6-212ENST00000461608 FKBPLQ9UIM3 349 aa5.6□□□□□ -1.51
HDAC6-212ENST00000461608 GPR37L1O60883 481 aa5.59□□□□□ -1.51
HDAC6-212ENST00000461608 EIF4G2P78344 907 aaKnown RBP eCLIP5.59□□□□□ -1.51
HDAC6-212ENST00000461608 INTS6LQ5JSJ4 861 aaKnown RBP5.59□□□□□ -1.51
HDAC6-212ENST00000461608 LYPD4Q6UWN0 246 aa5.59□□□□□ -1.51
HDAC6-212ENST00000461608 Q6ZVU0 165 aa5.59□□□□□ -1.51
HDAC6-212ENST00000461608 TRIM52Q96A61 297 aa5.59□□□□□ -1.51
HDAC6-212ENST00000461608 ARHGAP9Q9BRR9 750 aa5.59□□□□□ -1.51
HDAC6-212ENST00000461608 POLMQ9NP87 494 aaPredicted RBP5.59□□□□□ -1.51
HDAC6-212ENST00000461608 NSFL1CQ9UNZ2 370 aaKnown RBP5.59□□□□□ -1.51
HDAC6-212ENST00000461608 SLC35F4A4IF30 521 aa5.58□□□□□ -1.52
HDAC6-212ENST00000461608 CELA2BP08218 269 aaPredicted RBP5.58□□□□□ -1.52
HDAC6-212ENST00000461608 PDIA4P13667 645 aaKnown RBP5.58□□□□□ -1.52
HDAC6-212ENST00000461608 DHX9Q08211 1270 aaKnown RBP5.58□□□□□ -1.52
HDAC6-212ENST00000461608 PDXDC2PQ6P474 469 aa5.58□□□□□ -1.52
HDAC6-212ENST00000461608 Q8N3U1 123 aa5.58□□□□□ -1.52
HDAC6-212ENST00000461608 KCTD15Q96SI1 283 aaPredicted RBP5.58□□□□□ -1.52
HDAC6-212ENST00000461608 GPSM3Q9Y4H4 160 aa5.58□□□□□ -1.52
HDAC6-212ENST00000461608 POM121CA8CG34 1229 aa5.57□□□□□ -1.52
HDAC6-212ENST00000461608 SPINT1O43278 529 aa5.57□□□□□ -1.52
HDAC6-212ENST00000461608 CTSOP43234 321 aaPredicted RBP5.57□□□□□ -1.52
HDAC6-212ENST00000461608 MCCD1P59942 119 aaPredicted RBP5.57□□□□□ -1.52
HDAC6-212ENST00000461608 TMPRSS4Q9NRS4 437 aa5.57□□□□□ -1.52
HDAC6-212ENST00000461608 VAC14Q08AM6 782 aa5.56□□□□□ -1.52
HDAC6-212ENST00000461608 NR1H3Q13133 447 aa5.56□□□□□ -1.52
HDAC6-212ENST00000461608 SEMA3FQ13275 785 aa5.56□□□□□ -1.52
HDAC6-212ENST00000461608 ALYREFQ86V81 257 aaKnown RBP5.56□□□□□ -1.52
HDAC6-212ENST00000461608 KDF1Q8NAX2 398 aaPredicted RBP5.56□□□□□ -1.52
HDAC6-212ENST00000461608 ADAM32Q8TC27 787 aa5.56□□□□□ -1.52
HDAC6-212ENST00000461608 PBXIP1Q96AQ6 731 aa5.56□□□□□ -1.52
HDAC6-212ENST00000461608 SLC10A4Q96EP9 437 aa5.56□□□□□ -1.52
HDAC6-212ENST00000461608 INSM2Q96T92 566 aaPredicted RBP5.56□□□□□ -1.52
HDAC6-212ENST00000461608 CDV3Q9UKY7 258 aaKnown RBP5.56□□□□□ -1.52
HDAC6-212ENST00000461608 CNTNAP5Q8WYK1 1306 aa5.55□□□□□ -1.52
HDAC6-212ENST00000461608 ZBBXA8MT70 800 aa5.55□□□□□ -1.52
HDAC6-212ENST00000461608 PIK3R2O00459 728 aa5.55□□□□□ -1.52
HDAC6-212ENST00000461608 RELBQ01201 579 aa5.55□□□□□ -1.52
HDAC6-212ENST00000461608 HDGFL1Q5TGJ6 251 aa5.55□□□□□ -1.52
HDAC6-212ENST00000461608 GMCL1Q96IK5 515 aa5.55□□□□□ -1.52
HDAC6-212ENST00000461608 TRERF1Q96PN7 1200 aa5.55□□□□□ -1.52
HDAC6-212ENST00000461608 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
HDAC6-212ENST00000461608 ALG2Q9H553 416 aa5.55□□□□□ -1.52
HDAC6-212ENST00000461608 MBIPQ9NS73 344 aa5.55□□□□□ -1.52
HDAC6-212ENST00000461608 ACIN1Q9UKV3 1341 aaKnown RBP5.54□□□□□ -1.52
HDAC6-212ENST00000461608 SENP3-EIF4A1A0A087X0R7 540 aa5.54□□□□□ -1.52
HDAC6-212ENST00000461608 PATL2C9JE40 543 aaKnown RBP5.54□□□□□ -1.52
HDAC6-212ENST00000461608 BCRP11274 1271 aa5.54□□□□□ -1.52
HDAC6-212ENST00000461608 ADD1P35611 737 aaKnown RBP5.54□□□□□ -1.52
HDAC6-212ENST00000461608 RAB15P59190 212 aa5.54□□□□□ -1.52
HDAC6-212ENST00000461608 ZBTB33Q86T24 672 aa5.54□□□□□ -1.52
HDAC6-212ENST00000461608 ZNF784Q8NCA9 323 aaPredicted RBP5.54□□□□□ -1.52
HDAC6-212ENST00000461608 TRAIPQ9BWF2 469 aa5.54□□□□□ -1.52
HDAC6-212ENST00000461608 ZNF395Q9H8N7 513 aaPredicted RBP5.54□□□□□ -1.52
HDAC6-212ENST00000461608 USTQ9Y2C2 406 aa5.54□□□□□ -1.52
HDAC6-212ENST00000461608 LILRA1O75019 489 aa5.53□□□□□ -1.52
HDAC6-212ENST00000461608 BAG6P46379 1132 aa5.53□□□□□ -1.52
HDAC6-212ENST00000461608 PTK2Q05397 1052 aa5.53□□□□□ -1.52
HDAC6-212ENST00000461608 FOXD4L5Q5VV16 416 aaPredicted RBP5.53□□□□□ -1.52
HDAC6-212ENST00000461608 NFATC2IPQ8NCF5 419 aa5.53□□□□□ -1.52
HDAC6-212ENST00000461608 ADAMTS19Q8TE59 1207 aa5.53□□□□□ -1.52
HDAC6-212ENST00000461608 PPP1R12CQ9BZL4 782 aa5.53□□□□□ -1.52
HDAC6-212ENST00000461608 ZBTB7CA1YPR0 619 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms