RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 ENAMQ9NRM1 1142 aa6.21□□□□□ -1.42
LINC02540-201ENST00000455554 ADAM23O75077 832 aa6.2□□□□□ -1.42
LINC02540-201ENST00000455554 DBN1Q16643 649 aa6.2□□□□□ -1.42
LINC02540-201ENST00000455554 DZIP3Q86Y13 1208 aaKnown RBP6.2□□□□□ -1.42
LINC02540-201ENST00000455554 PNMA1Q8ND90 353 aa6.2□□□□□ -1.42
LINC02540-201ENST00000455554 CYLDQ9NQC7 956 aa6.2□□□□□ -1.42
LINC02540-201ENST00000455554 IGF1RP08069 1367 aa6.19□□□□□ -1.42
LINC02540-201ENST00000455554 SKIV2LQ15477 1246 aaKnown RBP6.19□□□□□ -1.42
LINC02540-201ENST00000455554 ACDQ96AP0 544 aa6.19□□□□□ -1.42
LINC02540-201ENST00000455554 PHF20L1A8MW92 1017 aa6.18□□□□□ -1.42
LINC02540-201ENST00000455554 ESPNB1AK53 854 aa6.18□□□□□ -1.42
LINC02540-201ENST00000455554 AP1G2O75843 785 aa6.18□□□□□ -1.42
LINC02540-201ENST00000455554 PPP2R2DQ66LE6 453 aa6.18□□□□□ -1.42
LINC02540-201ENST00000455554 TRIM22Q8IYM9 498 aa6.18□□□□□ -1.42
LINC02540-201ENST00000455554 GMCL1Q96IK5 515 aa6.18□□□□□ -1.42
LINC02540-201ENST00000455554 MBIPQ9NS73 344 aa6.18□□□□□ -1.42
LINC02540-201ENST00000455554 MSTNO14793 375 aa6.17□□□□□ -1.42
LINC02540-201ENST00000455554 THBS1P07996 1170 aa6.17□□□□□ -1.42
LINC02540-201ENST00000455554 RNF144AP50876 292 aaPredicted RBP6.17□□□□□ -1.42
LINC02540-201ENST00000455554 SH3D19Q5HYK7 790 aa6.17□□□□□ -1.42
LINC02540-201ENST00000455554 FOXR1Q6PIV2 292 aa6.17□□□□□ -1.42
LINC02540-201ENST00000455554 TRIM52Q96A61 297 aa6.17□□□□□ -1.42
LINC02540-201ENST00000455554 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.17□□□□□ -1.42
LINC02540-201ENST00000455554 ATP1B4Q9UN42 357 aaPredicted RBP6.17□□□□□ -1.42
LINC02540-201ENST00000455554 PODNQ7Z5L7 613 aa6.16□□□□□ -1.42
LINC02540-201ENST00000455554 SEPT12Q8IYM1 358 aa6.16□□□□□ -1.42
LINC02540-201ENST00000455554 GTPBP3Q969Y2 492 aaKnown RBP6.16□□□□□ -1.42
LINC02540-201ENST00000455554 BCRP11274 1271 aa6.15□□□□□ -1.42
LINC02540-201ENST00000455554 SNRPNP63162 240 aaKnown RBP6.15□□□□□ -1.42
LINC02540-201ENST00000455554 RIPOR1Q6ZS17 1223 aa6.15□□□□□ -1.42
LINC02540-201ENST00000455554 BEND7Q8N7W2 519 aaPredicted RBP6.15□□□□□ -1.42
LINC02540-201ENST00000455554 NEDD1Q8NHV4 660 aa6.15□□□□□ -1.42
LINC02540-201ENST00000455554 ATP5J2-PTCD1G3V325 749 aa6.14□□□□□ -1.43
LINC02540-201ENST00000455554 H7C1W4 665 aa6.14□□□□□ -1.43
LINC02540-201ENST00000455554 USP17L8P0C7I0 530 aa6.14□□□□□ -1.43
LINC02540-201ENST00000455554 GPC1P35052 558 aa6.14□□□□□ -1.43
LINC02540-201ENST00000455554 POU4F2Q12837 409 aa6.14□□□□□ -1.43
LINC02540-201ENST00000455554 C1orf229Q6ZS94 237 aaPredicted RBP6.14□□□□□ -1.43
LINC02540-201ENST00000455554 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
LINC02540-201ENST00000455554 KRBA1A5PL33 1030 aa6.13□□□□□ -1.43
LINC02540-201ENST00000455554 MEN1O00255 615 aa6.13□□□□□ -1.43
LINC02540-201ENST00000455554 GIGYF1O75420 1035 aaPredicted RBP6.13□□□□□ -1.43
LINC02540-201ENST00000455554 TRERF1Q96PN7 1200 aa6.13□□□□□ -1.43
LINC02540-201ENST00000455554 GPBP1L1Q9HC44 474 aaPredicted RBP6.13□□□□□ -1.43
LINC02540-201ENST00000455554 DYRK1BQ9Y463 629 aa6.13□□□□□ -1.43
LINC02540-201ENST00000455554 A0A1W2PRU2 124 aa6.12□□□□□ -1.43
LINC02540-201ENST00000455554 SHISA8B8ZZ34 492 aa6.12□□□□□ -1.43
LINC02540-201ENST00000455554 DDRGK1Q96HY6 314 aa6.12□□□□□ -1.43
LINC02540-201ENST00000455554 GAS2L1Q99501 681 aaPredicted RBP6.12□□□□□ -1.43
LINC02540-201ENST00000455554 TRIM34Q9BYJ4 488 aa6.12□□□□□ -1.43
LINC02540-201ENST00000455554 FAM117AQ9C073 453 aa6.12□□□□□ -1.43
LINC02540-201ENST00000455554 COL8A1P27658 744 aa6.11□□□□□ -1.43
LINC02540-201ENST00000455554 SCTRP47872 440 aa6.11□□□□□ -1.43
LINC02540-201ENST00000455554 GALNT6Q8NCL4 622 aa6.11□□□□□ -1.43
LINC02540-201ENST00000455554 LRRC4BQ9NT99 713 aa6.11□□□□□ -1.43
LINC02540-201ENST00000455554 NSFL1CQ9UNZ2 370 aaKnown RBP6.11□□□□□ -1.43
LINC02540-201ENST00000455554 MX2P20592 715 aa6.1□□□□□ -1.43
LINC02540-201ENST00000455554 SLC27A3Q5K4L6 730 aa6.1□□□□□ -1.43
LINC02540-201ENST00000455554 CCDC125Q86Z20 511 aa6.1□□□□□ -1.43
LINC02540-201ENST00000455554 NLRP3Q96P20 1036 aa6.1□□□□□ -1.43
LINC02540-201ENST00000455554 KDM4CQ9H3R0 1056 aa6.1□□□□□ -1.43
LINC02540-201ENST00000455554 HOXB4P17483 251 aaPredicted RBP6.09□□□□□ -1.43
LINC02540-201ENST00000455554 CC2D2BQ6DHV5 1058 aa6.09□□□□□ -1.43
LINC02540-201ENST00000455554 NBPF10Q6P3W6 841 aaKnown RBP6.09□□□□□ -1.43
LINC02540-201ENST00000455554 NBPF15Q8N660 670 aa6.09□□□□□ -1.43
LINC02540-201ENST00000455554 GRIP2Q9C0E4 1043 aa6.09□□□□□ -1.43
LINC02540-201ENST00000455554 PCDHB9Q9Y5E1 797 aa6.09□□□□□ -1.43
LINC02540-201ENST00000455554 ZBBXA8MT70 800 aa6.08□□□□□ -1.44
LINC02540-201ENST00000455554 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.08□□□□□ -1.44
LINC02540-201ENST00000455554 OIP5O43482 229 aa6.08□□□□□ -1.44
LINC02540-201ENST00000455554 FURINP09958 794 aa6.08□□□□□ -1.44
LINC02540-201ENST00000455554 BAG6P46379 1132 aa6.08□□□□□ -1.44
LINC02540-201ENST00000455554 ERVK-9P63128 1117 aa6.08□□□□□ -1.44
LINC02540-201ENST00000455554 CLN3Q13286 438 aa6.08□□□□□ -1.44
LINC02540-201ENST00000455554 WDR44Q5JSH3 913 aa6.08□□□□□ -1.44
LINC02540-201ENST00000455554 SUV39H2Q9H5I1 410 aa6.08□□□□□ -1.44
LINC02540-201ENST00000455554 SPATA31C2B4DYI2 1134 aa6.07□□□□□ -1.44
LINC02540-201ENST00000455554 K7ELQ4 463 aaPredicted RBP6.07□□□□□ -1.44
LINC02540-201ENST00000455554 FBXO45P0C2W1 286 aa6.07□□□□□ -1.44
LINC02540-201ENST00000455554 ITGB7P26010 798 aa6.07□□□□□ -1.44
LINC02540-201ENST00000455554 RFC5P40937 340 aa6.07□□□□□ -1.44
LINC02540-201ENST00000455554 UBAP2LQ14157 1087 aaKnown RBP6.07□□□□□ -1.44
LINC02540-201ENST00000455554 RNF20Q5VTR2 975 aa6.07□□□□□ -1.44
LINC02540-201ENST00000455554 CYP2U1Q7Z449 544 aa6.07□□□□□ -1.44
LINC02540-201ENST00000455554 Q8N3U1 123 aa6.07□□□□□ -1.44
LINC02540-201ENST00000455554 OXCT2Q9BYC2 517 aaPredicted RBP6.07□□□□□ -1.44
LINC02540-201ENST00000455554 NUCKS1Q9H1E3 243 aaKnown RBP6.07□□□□□ -1.44
LINC02540-201ENST00000455554 TIMMDC1Q9NPL8 285 aa6.07□□□□□ -1.44
LINC02540-201ENST00000455554 RAB6BQ9NRW1 208 aa6.07□□□□□ -1.44
LINC02540-201ENST00000455554 F11P03951 625 aa6.06□□□□□ -1.44
LINC02540-201ENST00000455554 MAP2K3P46734 347 aa6.06□□□□□ -1.44
LINC02540-201ENST00000455554 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
LINC02540-201ENST00000455554 OSBPL3Q9H4L5 887 aa6.06□□□□□ -1.44
LINC02540-201ENST00000455554 ARHGEF10LQ9HCE6 1279 aa6.06□□□□□ -1.44
LINC02540-201ENST00000455554 WASLO00401 505 aaPredicted RBP6.05□□□□□ -1.44
LINC02540-201ENST00000455554 C2CD2LO14523 706 aa6.05□□□□□ -1.44
LINC02540-201ENST00000455554 TAS1R3Q7RTX0 852 aa6.05□□□□□ -1.44
LINC02540-201ENST00000455554 KLRG1Q96E93 195 aa6.05□□□□□ -1.44
LINC02540-201ENST00000455554 GPAMQ9HCL2 828 aa6.05□□□□□ -1.44
LINC02540-201ENST00000455554 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms