RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 SRSF11Q05519 484 aaKnown RBP3.06□□□□□ -1.92
SNHG3-203ENST00000447507 DHX9Q08211 1270 aaKnown RBP3.06□□□□□ -1.92
SNHG3-203ENST00000447507 PDE4DQ08499 809 aa3.06□□□□□ -1.92
SNHG3-203ENST00000447507 RTL5Q5HYW3 569 aaPredicted RBP3.06□□□□□ -1.92
SNHG3-203ENST00000447507 Q6ZVU0 165 aa3.06□□□□□ -1.92
SNHG3-203ENST00000447507 ZC3H4Q9UPT8 1303 aaKnown RBP3.05□□□□□ -1.92
SNHG3-203ENST00000447507 FIGNL2A6NMB9 653 aa3.05□□□□□ -1.92
SNHG3-203ENST00000447507 CBLBQ13191 982 aa3.05□□□□□ -1.92
SNHG3-203ENST00000447507 CCDC155Q8N6L0 562 aa3.05□□□□□ -1.92
SNHG3-203ENST00000447507 ARHGAP9Q9BRR9 750 aa3.05□□□□□ -1.92
SNHG3-203ENST00000447507 RSPH6AQ9H0K4 717 aa3.05□□□□□ -1.92
SNHG3-203ENST00000447507 CDC14CA4D256 554 aa3.04□□□□□ -1.92
SNHG3-203ENST00000447507 ITGA6P23229 1130 aa3.04□□□□□ -1.92
SNHG3-203ENST00000447507 KRTAP1-1Q07627 177 aa3.04□□□□□ -1.92
SNHG3-203ENST00000447507 INTS6LQ5JSJ4 861 aaKnown RBP3.04□□□□□ -1.92
SNHG3-203ENST00000447507 PDXDC2PQ6P474 469 aa3.04□□□□□ -1.92
SNHG3-203ENST00000447507 ZBTB33Q86T24 672 aa3.04□□□□□ -1.92
SNHG3-203ENST00000447507 KCTD15Q96SI1 283 aaPredicted RBP3.04□□□□□ -1.92
SNHG3-203ENST00000447507 FKBPLQ9UIM3 349 aa3.04□□□□□ -1.92
SNHG3-203ENST00000447507 SLC35F4A4IF30 521 aa3.03□□□□□ -1.92
SNHG3-203ENST00000447507 CTSOP43234 321 aaPredicted RBP3.03□□□□□ -1.92
SNHG3-203ENST00000447507 RELBQ01201 579 aa3.03□□□□□ -1.92
SNHG3-203ENST00000447507 CTDSPL2Q05D32 466 aa3.03□□□□□ -1.92
SNHG3-203ENST00000447507 NBPF20Q3BBV1 942 aa3.03□□□□□ -1.92
SNHG3-203ENST00000447507 SV2AQ7L0J3 742 aa3.03□□□□□ -1.92
SNHG3-203ENST00000447507 AGBL1Q96MI9 1066 aa3.03□□□□□ -1.92
SNHG3-203ENST00000447507 POLMQ9NP87 494 aaPredicted RBP3.03□□□□□ -1.92
SNHG3-203ENST00000447507 POLR3EQ9NVU0 708 aa3.03□□□□□ -1.92
SNHG3-203ENST00000447507 ADH1AP07327 375 aa3.02□□□□□ -1.93
SNHG3-203ENST00000447507 PTK2Q05397 1052 aa3.02□□□□□ -1.93
SNHG3-203ENST00000447507 VWA5B2Q8N398 1253 aa3.02□□□□□ -1.93
SNHG3-203ENST00000447507 PNMA1Q8ND90 353 aa3.02□□□□□ -1.93
SNHG3-203ENST00000447507 RNF217Q8TC41 542 aa3.02□□□□□ -1.93
SNHG3-203ENST00000447507 LRRN4Q8WUT4 740 aa3.02□□□□□ -1.93
SNHG3-203ENST00000447507 INSM2Q96T92 566 aaPredicted RBP3.02□□□□□ -1.93
SNHG3-203ENST00000447507 SLC24A3Q9HC58 644 aa3.02□□□□□ -1.93
SNHG3-203ENST00000447507 GPSM3Q9Y4H4 160 aa3.02□□□□□ -1.93
SNHG3-203ENST00000447507 SENP3-EIF4A1A0A087X0R7 540 aa3.01□□□□□ -1.93
SNHG3-203ENST00000447507 C1QTNF9BB2RNN3 333 aa3.01□□□□□ -1.93
SNHG3-203ENST00000447507 NR6A1Q15406 480 aa3.01□□□□□ -1.93
SNHG3-203ENST00000447507 ZNF784Q8NCA9 323 aaPredicted RBP3.01□□□□□ -1.93
SNHG3-203ENST00000447507 ADAM32Q8TC27 787 aa3.01□□□□□ -1.93
SNHG3-203ENST00000447507 OCSTAMPQ9BR26 566 aa3.01□□□□□ -1.93
SNHG3-203ENST00000447507 LRRC4BQ9NT99 713 aa3.01□□□□□ -1.93
SNHG3-203ENST00000447507 COL8A1P27658 744 aa3□□□□□ -1.93
SNHG3-203ENST00000447507 RAB15P59190 212 aa3□□□□□ -1.93
SNHG3-203ENST00000447507 SKIV2LQ15477 1246 aaKnown RBP3□□□□□ -1.93
SNHG3-203ENST00000447507 SH3D19Q5HYK7 790 aa3□□□□□ -1.93
SNHG3-203ENST00000447507 FOXD4L5Q5VV16 416 aaPredicted RBP3□□□□□ -1.93
SNHG3-203ENST00000447507 DZIP3Q86Y13 1208 aaKnown RBP3□□□□□ -1.93
SNHG3-203ENST00000447507 NEDD1Q8NHV4 660 aa3□□□□□ -1.93
SNHG3-203ENST00000447507 TRIM52Q96A61 297 aa3□□□□□ -1.93
SNHG3-203ENST00000447507 ZNF395Q9H8N7 513 aaPredicted RBP3□□□□□ -1.93
SNHG3-203ENST00000447507 TMPRSS4Q9NRS4 437 aa3□□□□□ -1.93
SNHG3-203ENST00000447507 ESPNB1AK53 854 aa2.99□□□□□ -1.93
SNHG3-203ENST00000447507 ERVH48-1M5A8F1 160 aa2.99□□□□□ -1.93
SNHG3-203ENST00000447507 HYAL3O43820 417 aaPredicted RBP2.99□□□□□ -1.93
SNHG3-203ENST00000447507 LILRA1O75019 489 aa2.99□□□□□ -1.93
SNHG3-203ENST00000447507 AP1G2O75843 785 aa2.99□□□□□ -1.93
SNHG3-203ENST00000447507 USP17L8P0C7I0 530 aa2.99□□□□□ -1.93
SNHG3-203ENST00000447507 PTGIRP43119 386 aa2.99□□□□□ -1.93
SNHG3-203ENST00000447507 DOC2BQ14184 412 aa2.99□□□□□ -1.93
SNHG3-203ENST00000447507 RSPO4Q2I0M5 234 aaPredicted RBP2.99□□□□□ -1.93
SNHG3-203ENST00000447507 PPP2R2DQ66LE6 453 aa2.99□□□□□ -1.93
SNHG3-203ENST00000447507 LYSMD3Q7Z3D4 306 aa2.99□□□□□ -1.93
SNHG3-203ENST00000447507 DDRGK1Q96HY6 314 aa2.99□□□□□ -1.93
SNHG3-203ENST00000447507 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.99□□□□□ -1.93
SNHG3-203ENST00000447507 ATP1B4Q9UN42 357 aaPredicted RBP2.99□□□□□ -1.93
SNHG3-203ENST00000447507 ADD1P35611 737 aaKnown RBP2.98□□□□□ -1.93
SNHG3-203ENST00000447507 GAS6Q14393 721 aa2.98□□□□□ -1.93
SNHG3-203ENST00000447507 FBXO31Q5XUX0 539 aaPredicted RBP2.98□□□□□ -1.93
SNHG3-203ENST00000447507 CD163Q86VB7 1156 aa2.98□□□□□ -1.93
SNHG3-203ENST00000447507 SEPT12Q8IYM1 358 aa2.98□□□□□ -1.93
SNHG3-203ENST00000447507 KDF1Q8NAX2 398 aaPredicted RBP2.98□□□□□ -1.93
SNHG3-203ENST00000447507 GMCL1Q96IK5 515 aa2.98□□□□□ -1.93
SNHG3-203ENST00000447507 HMX1Q9NP08 348 aaPredicted RBP2.98□□□□□ -1.93
SNHG3-203ENST00000447507 CYLDQ9NQC7 956 aa2.98□□□□□ -1.93
SNHG3-203ENST00000447507 MBIPQ9NS73 344 aa2.98□□□□□ -1.93
SNHG3-203ENST00000447507 CUEDC1Q9NWM3 386 aaPredicted RBP2.98□□□□□ -1.93
SNHG3-203ENST00000447507 BCRP11274 1271 aa2.97□□□□□ -1.93
SNHG3-203ENST00000447507 RHOQP17081 205 aa2.97□□□□□ -1.93
SNHG3-203ENST00000447507 GPC1P35052 558 aa2.97□□□□□ -1.93
SNHG3-203ENST00000447507 RNF144AP50876 292 aaPredicted RBP2.97□□□□□ -1.93
SNHG3-203ENST00000447507 NKAPLQ5M9Q1 402 aa2.97□□□□□ -1.93
SNHG3-203ENST00000447507 FOXR1Q6PIV2 292 aa2.97□□□□□ -1.93
SNHG3-203ENST00000447507 PRICKLE2Q7Z3G6 844 aa2.97□□□□□ -1.93
SNHG3-203ENST00000447507 TRIM22Q8IYM9 498 aa2.97□□□□□ -1.93
SNHG3-203ENST00000447507 PROCA1Q8NCQ7 364 aaPredicted RBP2.97□□□□□ -1.93
SNHG3-203ENST00000447507 EPS8L1Q8TE68 723 aa2.97□□□□□ -1.93
SNHG3-203ENST00000447507 ZNF837Q96EG3 531 aaPredicted RBP2.97□□□□□ -1.93
SNHG3-203ENST00000447507 ATP5J2-PTCD1G3V325 749 aa2.96□□□□□ -1.94
SNHG3-203ENST00000447507 MEN1O00255 615 aa2.96□□□□□ -1.94
SNHG3-203ENST00000447507 RIPOR1Q6ZS17 1223 aa2.96□□□□□ -1.94
SNHG3-203ENST00000447507 FAM117AQ9C073 453 aa2.96□□□□□ -1.94
SNHG3-203ENST00000447507 KDM4CQ9H3R0 1056 aa2.96□□□□□ -1.94
SNHG3-203ENST00000447507 GPBP1L1Q9HC44 474 aaPredicted RBP2.96□□□□□ -1.94
SNHG3-203ENST00000447507 MKL2Q9ULH7 1088 aa2.96□□□□□ -1.94
SNHG3-203ENST00000447507 RNF114Q9Y508 228 aa2.96□□□□□ -1.94
SNHG3-203ENST00000447507 IGF1RP08069 1367 aa2.96□□□□□ -1.94
SNHG3-203ENST00000447507 H7C1W4 665 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms