RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 DDB1Q16531 1140 aa17.8■□□□□ 0.44
HLA-DOB-207ENST00000447394 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
HLA-DOB-207ENST00000447394 RAPGEF4Q8WZA2 1011 aa17.8■□□□□ 0.44
HLA-DOB-207ENST00000447394 TOGARAM1Q9Y4F4 1720 aa17.8■□□□□ 0.44
HLA-DOB-207ENST00000447394 EP400Q96L91 3159 aa17.79■□□□□ 0.44
HLA-DOB-207ENST00000447394 TATP17735 454 aaPredicted RBP17.79■□□□□ 0.44
HLA-DOB-207ENST00000447394 KRT27Q7Z3Y8 459 aa17.79■□□□□ 0.44
HLA-DOB-207ENST00000447394 CDCA7Q9BWT1 371 aaPredicted RBP17.78■□□□□ 0.44
HLA-DOB-207ENST00000447394 U2AF1L5P0DN76 240 aaPredicted RBP17.77■□□□□ 0.44
HLA-DOB-207ENST00000447394 U2AF1Q01081 240 aaKnown RBP eCLIP17.77■□□□□ 0.44
HLA-DOB-207ENST00000447394 MARCH10Q8NA82 808 aaPredicted RBP17.77■□□□□ 0.44
HLA-DOB-207ENST00000447394 TNS1Q9HBL0 1735 aaKnown RBP17.77■□□□□ 0.44
HLA-DOB-207ENST00000447394 DLG5Q8TDM6 1919 aa17.76■□□□□ 0.43
HLA-DOB-207ENST00000447394 EXOC5O00471 708 aa17.76■□□□□ 0.43
HLA-DOB-207ENST00000447394 PDE3BQ13370 1112 aa17.76■□□□□ 0.43
HLA-DOB-207ENST00000447394 ZCRB1Q8TBF4 217 aaKnown RBP17.75■□□□□ 0.43
HLA-DOB-207ENST00000447394 DDX54Q8TDD1 881 aaKnown RBP17.75■□□□□ 0.43
HLA-DOB-207ENST00000447394 RSPH6AQ9H0K4 717 aa17.75■□□□□ 0.43
HLA-DOB-207ENST00000447394 NUDCQ9Y266 331 aa17.75■□□□□ 0.43
HLA-DOB-207ENST00000447394 KAT6BQ8WYB5 2073 aa17.75■□□□□ 0.43
HLA-DOB-207ENST00000447394 ITGB4P16144 1822 aa17.75■□□□□ 0.43
HLA-DOB-207ENST00000447394 NHSQ6T4R5 1651 aa17.74■□□□□ 0.43
HLA-DOB-207ENST00000447394 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
HLA-DOB-207ENST00000447394 MRS2Q9HD23 443 aa17.73■□□□□ 0.43
HLA-DOB-207ENST00000447394 SCN11AQ9UI33 1791 aa17.72■□□□□ 0.43
HLA-DOB-207ENST00000447394 CYP27B1O15528 508 aa17.72■□□□□ 0.43
HLA-DOB-207ENST00000447394 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
HLA-DOB-207ENST00000447394 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
HLA-DOB-207ENST00000447394 BTAF1O14981 1849 aa17.71■□□□□ 0.43
HLA-DOB-207ENST00000447394 MIER1Q8N108 512 aa17.71■□□□□ 0.43
HLA-DOB-207ENST00000447394 PHACTR3Q96KR7 559 aa17.71■□□□□ 0.43
HLA-DOB-207ENST00000447394 WDR43Q15061 677 aaKnown RBP eCLIP17.69■□□□□ 0.42
HLA-DOB-207ENST00000447394 MTHFSDQ2M296 383 aaKnown RBP17.69■□□□□ 0.42
HLA-DOB-207ENST00000447394 ZNF530Q6P9A1 599 aaPredicted RBP17.69■□□□□ 0.42
HLA-DOB-207ENST00000447394 PTF1AQ7RTS3 328 aa17.69■□□□□ 0.42
HLA-DOB-207ENST00000447394 CCDC146Q8IYE0 955 aa17.69■□□□□ 0.42
HLA-DOB-207ENST00000447394 ACSBG1Q96GR2 724 aa17.69■□□□□ 0.42
HLA-DOB-207ENST00000447394 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
HLA-DOB-207ENST00000447394 KDM6AO15550 1401 aaPredicted RBP17.68■□□□□ 0.42
HLA-DOB-207ENST00000447394 PHKG2P15735 406 aa17.68■□□□□ 0.42
HLA-DOB-207ENST00000447394 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
HLA-DOB-207ENST00000447394 ADAMTS8Q9UP79 889 aa17.68■□□□□ 0.42
HLA-DOB-207ENST00000447394 ADAMTS7Q9UKP4 1686 aa17.67■□□□□ 0.42
HLA-DOB-207ENST00000447394 PLEKHF1Q96S99 279 aa17.67■□□□□ 0.42
HLA-DOB-207ENST00000447394 PLEKHG2Q9H7P9 1386 aa17.66■□□□□ 0.42
HLA-DOB-207ENST00000447394 FCHSD2O94868 740 aa17.66■□□□□ 0.42
HLA-DOB-207ENST00000447394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.42
HLA-DOB-207ENST00000447394 SENP3-EIF4A1A0A087X0R7 540 aa17.65■□□□□ 0.42
HLA-DOB-207ENST00000447394 KCNQ2O43526 872 aa17.65■□□□□ 0.42
HLA-DOB-207ENST00000447394 TRIM37O94972 964 aa17.65■□□□□ 0.42
HLA-DOB-207ENST00000447394 AMOTQ4VCS5 1084 aa17.65■□□□□ 0.42
HLA-DOB-207ENST00000447394 FAM196AQ6ZSG2 479 aa17.65■□□□□ 0.42
HLA-DOB-207ENST00000447394 PNISRQ8TF01 805 aaKnown RBP17.65■□□□□ 0.42
HLA-DOB-207ENST00000447394 SIPA1L3O60292 1781 aaPredicted RBP17.65■□□□□ 0.42
HLA-DOB-207ENST00000447394 BCL9O00512 1426 aa17.64■□□□□ 0.42
HLA-DOB-207ENST00000447394 IFNL2Q8IZJ0 200 aa17.64■□□□□ 0.41
HLA-DOB-207ENST00000447394 MPRIPQ6WCQ1 1025 aa17.63■□□□□ 0.41
HLA-DOB-207ENST00000447394 UPF1Q92900 1129 aaKnown RBP eCLIP17.63■□□□□ 0.41
HLA-DOB-207ENST00000447394 C1orf141Q5JVX7 400 aa17.62■□□□□ 0.41
HLA-DOB-207ENST00000447394 FAM9BQ8IZU0 186 aa17.62■□□□□ 0.41
HLA-DOB-207ENST00000447394 MAP3K5Q99683 1374 aa17.62■□□□□ 0.41
HLA-DOB-207ENST00000447394 SYTL4Q96C24 671 aaPredicted RBP17.61■□□□□ 0.41
HLA-DOB-207ENST00000447394 RRP7AQ9Y3A4 280 aaKnown RBP17.61■□□□□ 0.41
HLA-DOB-207ENST00000447394 MAPK8IP3Q9UPT6 1336 aa17.61■□□□□ 0.41
HLA-DOB-207ENST00000447394 PRIM1P49642 420 aaKnown RBP17.6■□□□□ 0.41
HLA-DOB-207ENST00000447394 NKX1-1Q15270 411 aaPredicted RBP17.6■□□□□ 0.41
HLA-DOB-207ENST00000447394 AKAP4Q5JQC9 854 aa17.6■□□□□ 0.41
HLA-DOB-207ENST00000447394 PAPPAQ13219 1627 aa17.6■□□□□ 0.41
HLA-DOB-207ENST00000447394 MRC1P22897 1456 aa17.59■□□□□ 0.41
HLA-DOB-207ENST00000447394 CCER2I3L3R5 266 aa17.59■□□□□ 0.41
HLA-DOB-207ENST00000447394 GAS2L2Q8NHY3 880 aa17.59■□□□□ 0.41
HLA-DOB-207ENST00000447394 LGR6Q9HBX8 967 aa17.59■□□□□ 0.41
HLA-DOB-207ENST00000447394 RGPD3A6NKT7 1758 aaPredicted RBP17.58■□□□□ 0.41
HLA-DOB-207ENST00000447394 RGPD4Q7Z3J3 1758 aa17.58■□□□□ 0.41
HLA-DOB-207ENST00000447394 LY75O60449 1722 aa17.58■□□□□ 0.41
HLA-DOB-207ENST00000447394 RREB1Q92766 1687 aa17.58■□□□□ 0.41
HLA-DOB-207ENST00000447394 RUNDC1Q96C34 613 aa17.58■□□□□ 0.4
HLA-DOB-207ENST00000447394 DCTN1Q14203 1278 aa17.57■□□□□ 0.4
HLA-DOB-207ENST00000447394 NFE2L2Q16236 605 aa17.57■□□□□ 0.4
HLA-DOB-207ENST00000447394 DCAF5Q96JK2 942 aa17.57■□□□□ 0.4
HLA-DOB-207ENST00000447394 NUP188Q5SRE5 1749 aa17.57■□□□□ 0.4
HLA-DOB-207ENST00000447394 GNAT3A8MTJ3 354 aa17.56■□□□□ 0.4
HLA-DOB-207ENST00000447394 SOCS7O14512 581 aa17.56■□□□□ 0.4
HLA-DOB-207ENST00000447394 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
HLA-DOB-207ENST00000447394 NEFMP07197 916 aa17.56■□□□□ 0.4
HLA-DOB-207ENST00000447394 MCM10Q7L590 875 aa17.56■□□□□ 0.4
HLA-DOB-207ENST00000447394 DEFB132Q7Z7B7 95 aa17.56■□□□□ 0.4
HLA-DOB-207ENST00000447394 BCL11BQ9C0K0 894 aaPredicted RBP17.56■□□□□ 0.4
HLA-DOB-207ENST00000447394 APBA3O96018 575 aa17.55■□□□□ 0.4
HLA-DOB-207ENST00000447394 NEUROD2Q15784 382 aa17.55■□□□□ 0.4
HLA-DOB-207ENST00000447394 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
HLA-DOB-207ENST00000447394 THUMPD2Q9BTF0 503 aaKnown RBP17.55■□□□□ 0.4
HLA-DOB-207ENST00000447394 PNNQ9H307 717 aaKnown RBP17.55■□□□□ 0.4
HLA-DOB-207ENST00000447394 UBR2Q8IWV8 1755 aa17.54■□□□□ 0.4
HLA-DOB-207ENST00000447394 APAF1O14727 1248 aa17.54■□□□□ 0.4
HLA-DOB-207ENST00000447394 HSP90AB1P08238 724 aaKnown RBP17.54■□□□□ 0.4
HLA-DOB-207ENST00000447394 TMPOP42166 694 aaKnown RBP17.54■□□□□ 0.4
HLA-DOB-207ENST00000447394 PIGBQ92521 554 aa17.54■□□□□ 0.4
HLA-DOB-207ENST00000447394 EN1Q05925 392 aaPredicted RBP17.53■□□□□ 0.4
HLA-DOB-207ENST00000447394 TMOD3Q9NYL9 352 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms