RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 TTC21AQ8NDW8 1320 aa9.63□□□□□ -0.87
ERCC8-203ENST00000439176 EZH2Q15910 746 aaKnown RBP9.63□□□□□ -0.87
ERCC8-203ENST00000439176 NBPF14Q5TI25 921 aa9.63□□□□□ -0.87
ERCC8-203ENST00000439176 MARVELD3Q96A59 401 aa9.63□□□□□ -0.87
ERCC8-203ENST00000439176 CDCA7Q9BWT1 371 aaPredicted RBP9.63□□□□□ -0.87
ERCC8-203ENST00000439176 CARD11Q9BXL7 1154 aa9.63□□□□□ -0.87
ERCC8-203ENST00000439176 CRB1P82279 1406 aa9.63□□□□□ -0.87
ERCC8-203ENST00000439176 TTC21BQ7Z4L5 1316 aa9.62□□□□□ -0.87
ERCC8-203ENST00000439176 COL5A2P05997 1499 aaPredicted RBP9.62□□□□□ -0.87
ERCC8-203ENST00000439176 CSB-PGBD3P0DP91 1061 aa9.62□□□□□ -0.87
ERCC8-203ENST00000439176 R3HDM1Q15032 1099 aaKnown RBP9.62□□□□□ -0.87
ERCC8-203ENST00000439176 DDB1Q16531 1140 aa9.62□□□□□ -0.87
ERCC8-203ENST00000439176 CAMKK2Q96RR4 588 aa9.62□□□□□ -0.87
ERCC8-203ENST00000439176 KTN1Q86UP2 1357 aaKnown RBP9.62□□□□□ -0.87
ERCC8-203ENST00000439176 TONSLQ96HA7 1378 aa9.62□□□□□ -0.87
ERCC8-203ENST00000439176 TRPM1Q7Z4N2 1603 aa9.61□□□□□ -0.87
ERCC8-203ENST00000439176 SLC24A1O60721 1099 aa9.61□□□□□ -0.87
ERCC8-203ENST00000439176 HDGFL2Q7Z4V5 671 aaPredicted RBP9.61□□□□□ -0.87
ERCC8-203ENST00000439176 ZNF467Q7Z7K2 595 aaPredicted RBP9.61□□□□□ -0.87
ERCC8-203ENST00000439176 TMC1Q8TDI8 760 aa9.61□□□□□ -0.87
ERCC8-203ENST00000439176 LMO7Q8WWI1 1683 aa9.61□□□□□ -0.87
ERCC8-203ENST00000439176 WDR17Q8IZU2 1322 aa9.6□□□□□ -0.87
ERCC8-203ENST00000439176 SNPHO15079 494 aa9.6□□□□□ -0.87
ERCC8-203ENST00000439176 SOX12O15370 315 aa9.6□□□□□ -0.87
ERCC8-203ENST00000439176 PLCG2P16885 1265 aa9.6□□□□□ -0.87
ERCC8-203ENST00000439176 ARHGEF25Q86VW2 580 aa9.6□□□□□ -0.87
ERCC8-203ENST00000439176 SBNO2Q9Y2G9 1366 aa9.6□□□□□ -0.87
ERCC8-203ENST00000439176 OVOS2A0A0G2JMS6 1433 aa9.59□□□□□ -0.87
ERCC8-203ENST00000439176 OVOS2A0A0J9YW53 1432 aa9.59□□□□□ -0.87
ERCC8-203ENST00000439176 OVOS2Q6IE36 1432 aa9.59□□□□□ -0.87
ERCC8-203ENST00000439176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.59□□□□□ -0.87
ERCC8-203ENST00000439176 RNF25Q96BH1 459 aaPredicted RBP9.59□□□□□ -0.87
ERCC8-203ENST00000439176 TERF2IPQ9NYB0 399 aa9.59□□□□□ -0.87
ERCC8-203ENST00000439176 PCDHB8Q9UN66 801 aa9.59□□□□□ -0.87
ERCC8-203ENST00000439176 SLIT3O75094 1523 aa9.59□□□□□ -0.87
ERCC8-203ENST00000439176 CPSF1Q10570 1443 aaKnown RBP9.58□□□□□ -0.88
ERCC8-203ENST00000439176 LRP5O75197 1615 aa9.58□□□□□ -0.88
ERCC8-203ENST00000439176 EXOC5O00471 708 aa9.58□□□□□ -0.88
ERCC8-203ENST00000439176 CARD10Q9BWT7 1032 aa9.58□□□□□ -0.88
ERCC8-203ENST00000439176 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
ERCC8-203ENST00000439176 TNS1Q9HBL0 1735 aaKnown RBP9.57□□□□□ -0.88
ERCC8-203ENST00000439176 PUS7Q96PZ0 661 aaKnown RBP9.57□□□□□ -0.88
ERCC8-203ENST00000439176 BCL11BQ9C0K0 894 aaPredicted RBP9.57□□□□□ -0.88
ERCC8-203ENST00000439176 PIK3C2AO00443 1686 aa9.57□□□□□ -0.88
ERCC8-203ENST00000439176 PARP4Q9UKK3 1724 aaKnown RBP9.56□□□□□ -0.88
ERCC8-203ENST00000439176 CCDC7Q96M83 1385 aa9.56□□□□□ -0.88
ERCC8-203ENST00000439176 PLSCR1O15162 318 aa9.56□□□□□ -0.88
ERCC8-203ENST00000439176 USP31Q70CQ4 1352 aa9.55□□□□□ -0.88
ERCC8-203ENST00000439176 SLC12A5Q9H2X9 1139 aa9.55□□□□□ -0.88
ERCC8-203ENST00000439176 RTN4Q9NQC3 1192 aaKnown RBP9.55□□□□□ -0.88
ERCC8-203ENST00000439176 NLRP2Q9NX02 1062 aa9.55□□□□□ -0.88
ERCC8-203ENST00000439176 AKAP12Q02952 1782 aa9.55□□□□□ -0.88
ERCC8-203ENST00000439176 NINLQ9Y2I6 1382 aa9.54□□□□□ -0.88
ERCC8-203ENST00000439176 NME9Q86XW9 330 aa9.54□□□□□ -0.88
ERCC8-203ENST00000439176 SPON1Q9HCB6 807 aa9.54□□□□□ -0.88
ERCC8-203ENST00000439176 PPP1R1BQ9UD71 204 aaPredicted RBP9.54□□□□□ -0.88
ERCC8-203ENST00000439176 ABCC6O95255 1503 aa9.54□□□□□ -0.88
ERCC8-203ENST00000439176 ECM2O94769 699 aaPredicted RBP9.53□□□□□ -0.88
ERCC8-203ENST00000439176 TRIM26Q12899 539 aaPredicted RBP9.53□□□□□ -0.88
ERCC8-203ENST00000439176 MARCH10Q8NA82 808 aaPredicted RBP9.53□□□□□ -0.88
ERCC8-203ENST00000439176 BCL9O00512 1426 aa9.53□□□□□ -0.88
ERCC8-203ENST00000439176 EDC4Q6P2E9 1401 aaKnown RBP9.53□□□□□ -0.88
ERCC8-203ENST00000439176 ERBB3P21860 1342 aa9.53□□□□□ -0.88
ERCC8-203ENST00000439176 COL18A1P39060 1754 aa9.52□□□□□ -0.88
ERCC8-203ENST00000439176 ST20-MTHFSA0A0A6YYL1 179 aa9.52□□□□□ -0.89
ERCC8-203ENST00000439176 RIOK3O14730 519 aaKnown RBP9.52□□□□□ -0.89
ERCC8-203ENST00000439176 IL2RBP14784 551 aa9.52□□□□□ -0.89
ERCC8-203ENST00000439176 COG3Q96JB2 828 aa9.52□□□□□ -0.89
ERCC8-203ENST00000439176 TMEM106CQ9BVX2 250 aa9.52□□□□□ -0.89
ERCC8-203ENST00000439176 LRRC37A3O60309 1634 aa9.52□□□□□ -0.89
ERCC8-203ENST00000439176 NFAT5O94916 1531 aa9.51□□□□□ -0.89
ERCC8-203ENST00000439176 MON2Q7Z3U7 1717 aa9.51□□□□□ -0.89
ERCC8-203ENST00000439176 KCNQ2O43526 872 aa9.51□□□□□ -0.89
ERCC8-203ENST00000439176 PSEN1P49768 467 aa9.51□□□□□ -0.89
ERCC8-203ENST00000439176 EMP3P54852 163 aa9.51□□□□□ -0.89
ERCC8-203ENST00000439176 PDAP1Q13442 181 aaKnown RBP9.51□□□□□ -0.89
ERCC8-203ENST00000439176 CDCA8Q53HL2 280 aa9.51□□□□□ -0.89
ERCC8-203ENST00000439176 ANKRD24Q8TF21 1146 aa9.51□□□□□ -0.89
ERCC8-203ENST00000439176 STK32BQ9NY57 414 aa9.51□□□□□ -0.89
ERCC8-203ENST00000439176 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
ERCC8-203ENST00000439176 RREB1Q92766 1687 aa9.51□□□□□ -0.89
ERCC8-203ENST00000439176 A0A1W2PP64 1363 aa9.5□□□□□ -0.89
ERCC8-203ENST00000439176 RGL2O15211 777 aa9.5□□□□□ -0.89
ERCC8-203ENST00000439176 IRX5P78411 483 aaPredicted RBP9.5□□□□□ -0.89
ERCC8-203ENST00000439176 TMF1P82094 1093 aa9.5□□□□□ -0.89
ERCC8-203ENST00000439176 AMER1Q5JTC6 1135 aaPredicted RBP9.5□□□□□ -0.89
ERCC8-203ENST00000439176 IP6K1Q92551 441 aa9.5□□□□□ -0.89
ERCC8-203ENST00000439176 TNS2Q63HR2 1409 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 CD163L1Q9NR16 1453 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 NUP188Q5SRE5 1749 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 PEAK1Q9H792 1746 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 AMPHP49418 695 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 TXNRD1Q16881 649 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 TESK2Q96S53 571 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 KRTAP3-3Q9BYR6 98 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 RGPD3A6NKT7 1758 aaPredicted RBP9.49□□□□□ -0.89
ERCC8-203ENST00000439176 RGPD4Q7Z3J3 1758 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 RGPD5Q99666 1765 aa9.49□□□□□ -0.89
ERCC8-203ENST00000439176 LTV1Q96GA3 475 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms