RNA–Protein interactions for RNA: ENST00000432343.1

ARPC1B-208, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 839 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-208ENST00000432343 NCAPD2Q15021 1401 aa18.39■□□□□ 0.53
ARPC1B-208ENST00000432343 TNS2Q63HR2 1409 aa18.39■□□□□ 0.53
ARPC1B-208ENST00000432343 EXOC5O00471 708 aa18.38■□□□□ 0.53
ARPC1B-208ENST00000432343 CDCA7Q9BWT1 371 aaPredicted RBP18.38■□□□□ 0.53
ARPC1B-208ENST00000432343 NUDCQ9Y266 331 aa18.38■□□□□ 0.53
ARPC1B-208ENST00000432343 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
ARPC1B-208ENST00000432343 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.53
ARPC1B-208ENST00000432343 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
ARPC1B-208ENST00000432343 CCDC184Q52MB2 194 aa18.36■□□□□ 0.53
ARPC1B-208ENST00000432343 DDX54Q8TDD1 881 aaKnown RBP18.36■□□□□ 0.53
ARPC1B-208ENST00000432343 ZCRB1Q8TBF4 217 aaKnown RBP18.34■□□□□ 0.53
ARPC1B-208ENST00000432343 VIRMAQ69YN4 1812 aaKnown RBP18.34■□□□□ 0.53
ARPC1B-208ENST00000432343 SBF2Q86WG5 1849 aa18.34■□□□□ 0.53
ARPC1B-208ENST00000432343 MARCH10Q8NA82 808 aaPredicted RBP18.33■□□□□ 0.52
ARPC1B-208ENST00000432343 DOT1LQ8TEK3 1739 aa18.32■□□□□ 0.52
ARPC1B-208ENST00000432343 KDRP35968 1356 aa18.32■□□□□ 0.52
ARPC1B-208ENST00000432343 PRKAR2BP31323 418 aa18.31■□□□□ 0.52
ARPC1B-208ENST00000432343 WDR43Q15061 677 aaKnown RBP eCLIP18.31■□□□□ 0.52
ARPC1B-208ENST00000432343 MRS2Q9HD23 443 aa18.31■□□□□ 0.52
ARPC1B-208ENST00000432343 SPG7Q9UQ90 795 aa18.31■□□□□ 0.52
ARPC1B-208ENST00000432343 PCDH11XQ9BZA7 1347 aa18.29■□□□□ 0.52
ARPC1B-208ENST00000432343 PCDH11YQ9BZA8 1340 aa18.29■□□□□ 0.52
ARPC1B-208ENST00000432343 PLEKHO1Q53GL0 409 aaPredicted RBP18.29■□□□□ 0.52
ARPC1B-208ENST00000432343 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
ARPC1B-208ENST00000432343 DLG5Q8TDM6 1919 aa18.28■□□□□ 0.52
ARPC1B-208ENST00000432343 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
ARPC1B-208ENST00000432343 TOGARAM1Q9Y4F4 1720 aa18.27■□□□□ 0.52
ARPC1B-208ENST00000432343 CYP27B1O15528 508 aa18.27■□□□□ 0.52
ARPC1B-208ENST00000432343 ACSBG1Q96GR2 724 aa18.27■□□□□ 0.52
ARPC1B-208ENST00000432343 ITGB4P16144 1822 aa18.27■□□□□ 0.52
ARPC1B-208ENST00000432343 CCDC146Q8IYE0 955 aa18.26■□□□□ 0.51
ARPC1B-208ENST00000432343 MIER1Q8N108 512 aa18.26■□□□□ 0.51
ARPC1B-208ENST00000432343 TNS1Q9HBL0 1735 aaKnown RBP18.26■□□□□ 0.51
ARPC1B-208ENST00000432343 FCHSD2O94868 740 aa18.25■□□□□ 0.51
ARPC1B-208ENST00000432343 AMOTQ4VCS5 1084 aa18.25■□□□□ 0.51
ARPC1B-208ENST00000432343 FAM196AQ6ZSG2 479 aa18.25■□□□□ 0.51
ARPC1B-208ENST00000432343 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
ARPC1B-208ENST00000432343 EP400Q96L91 3159 aa18.25■□□□□ 0.51
ARPC1B-208ENST00000432343 NHSQ6T4R5 1651 aa18.25■□□□□ 0.51
ARPC1B-208ENST00000432343 TRIM37O94972 964 aa18.24■□□□□ 0.51
ARPC1B-208ENST00000432343 PHKG2P15735 406 aa18.24■□□□□ 0.51
ARPC1B-208ENST00000432343 MTHFSDQ2M296 383 aaKnown RBP18.24■□□□□ 0.51
ARPC1B-208ENST00000432343 C1orf141Q5JVX7 400 aa18.24■□□□□ 0.51
ARPC1B-208ENST00000432343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.24■□□□□ 0.51
ARPC1B-208ENST00000432343 ADAMTS8Q9UP79 889 aa18.24■□□□□ 0.51
ARPC1B-208ENST00000432343 SCN11AQ9UI33 1791 aa18.24■□□□□ 0.51
ARPC1B-208ENST00000432343 BTAF1O14981 1849 aa18.23■□□□□ 0.51
ARPC1B-208ENST00000432343 NEFMP07197 916 aa18.23■□□□□ 0.51
ARPC1B-208ENST00000432343 IFNL2Q8IZJ0 200 aa18.23■□□□□ 0.51
ARPC1B-208ENST00000432343 SYTL4Q96C24 671 aaPredicted RBP18.23■□□□□ 0.51
ARPC1B-208ENST00000432343 MAPK8IP3Q9UPT6 1336 aa18.22■□□□□ 0.51
ARPC1B-208ENST00000432343 KCNQ2O43526 872 aa18.21■□□□□ 0.51
ARPC1B-208ENST00000432343 PTF1AQ7RTS3 328 aa18.21■□□□□ 0.51
ARPC1B-208ENST00000432343 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
ARPC1B-208ENST00000432343 PLEKHG2Q9H7P9 1386 aa18.2■□□□□ 0.5
ARPC1B-208ENST00000432343 SENP3-EIF4A1A0A087X0R7 540 aa18.2■□□□□ 0.5
ARPC1B-208ENST00000432343 MPRIPQ6WCQ1 1025 aa18.2■□□□□ 0.5
ARPC1B-208ENST00000432343 UPF1Q92900 1129 aaKnown RBP eCLIP18.2■□□□□ 0.5
ARPC1B-208ENST00000432343 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
ARPC1B-208ENST00000432343 GAS2L2Q8NHY3 880 aa18.19■□□□□ 0.5
ARPC1B-208ENST00000432343 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
ARPC1B-208ENST00000432343 PNNQ9H307 717 aaKnown RBP18.19■□□□□ 0.5
ARPC1B-208ENST00000432343 KDM6AO15550 1401 aaPredicted RBP18.18■□□□□ 0.5
ARPC1B-208ENST00000432343 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
ARPC1B-208ENST00000432343 SF3B2Q13435 895 aaKnown RBP18.18■□□□□ 0.5
ARPC1B-208ENST00000432343 AKAP4Q5JQC9 854 aa18.18■□□□□ 0.5
ARPC1B-208ENST00000432343 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
ARPC1B-208ENST00000432343 RRP7AQ9Y3A4 280 aaKnown RBP18.17■□□□□ 0.5
ARPC1B-208ENST00000432343 BCL9O00512 1426 aa18.16■□□□□ 0.5
ARPC1B-208ENST00000432343 APBA3O96018 575 aa18.16■□□□□ 0.5
ARPC1B-208ENST00000432343 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
ARPC1B-208ENST00000432343 NEUROD2Q15784 382 aa18.16■□□□□ 0.5
ARPC1B-208ENST00000432343 RUNDC1Q96C34 613 aa18.16■□□□□ 0.5
ARPC1B-208ENST00000432343 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
ARPC1B-208ENST00000432343 NKX1-1Q15270 411 aaPredicted RBP18.15■□□□□ 0.5
ARPC1B-208ENST00000432343 DCAF5Q96JK2 942 aa18.15■□□□□ 0.5
ARPC1B-208ENST00000432343 LGR6Q9HBX8 967 aa18.15■□□□□ 0.5
ARPC1B-208ENST00000432343 CCER2I3L3R5 266 aa18.14■□□□□ 0.49
ARPC1B-208ENST00000432343 DCTN1Q14203 1278 aa18.14■□□□□ 0.49
ARPC1B-208ENST00000432343 NFE2L2Q16236 605 aa18.14■□□□□ 0.49
ARPC1B-208ENST00000432343 DEFB132Q7Z7B7 95 aa18.14■□□□□ 0.49
ARPC1B-208ENST00000432343 BCL11BQ9C0K0 894 aaPredicted RBP18.14■□□□□ 0.49
ARPC1B-208ENST00000432343 ADAMTS7Q9UKP4 1686 aa18.13■□□□□ 0.49
ARPC1B-208ENST00000432343 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
ARPC1B-208ENST00000432343 SIPA1L3O60292 1781 aaPredicted RBP18.12■□□□□ 0.49
ARPC1B-208ENST00000432343 CABP4P57796 275 aa18.12■□□□□ 0.49
ARPC1B-208ENST00000432343 MCM10Q7L590 875 aa18.12■□□□□ 0.49
ARPC1B-208ENST00000432343 RTF1Q92541 710 aaKnown RBP18.12■□□□□ 0.49
ARPC1B-208ENST00000432343 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
ARPC1B-208ENST00000432343 APAF1O14727 1248 aa18.11■□□□□ 0.49
ARPC1B-208ENST00000432343 TMPOP42166 694 aaKnown RBP18.11■□□□□ 0.49
ARPC1B-208ENST00000432343 RIPK4P57078 832 aa18.11■□□□□ 0.49
ARPC1B-208ENST00000432343 EN1Q05925 392 aaPredicted RBP18.11■□□□□ 0.49
ARPC1B-208ENST00000432343 BAG6P46379 1132 aa18.1■□□□□ 0.49
ARPC1B-208ENST00000432343 CCDC125Q86Z20 511 aa18.1■□□□□ 0.49
ARPC1B-208ENST00000432343 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
ARPC1B-208ENST00000432343 PIGBQ92521 554 aa18.1■□□□□ 0.49
ARPC1B-208ENST00000432343 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
ARPC1B-208ENST00000432343 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
ARPC1B-208ENST00000432343 LY75O60449 1722 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms