RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
CDH13-203ENST00000431540 SPON1Q9HCB6 807 aa11.91□□□□□ -0.5
CDH13-203ENST00000431540 AKAP12Q02952 1782 aa11.91□□□□□ -0.5
CDH13-203ENST00000431540 TRPM1Q7Z4N2 1603 aa11.9□□□□□ -0.5
CDH13-203ENST00000431540 KCNQ2O43526 872 aa11.9□□□□□ -0.5
CDH13-203ENST00000431540 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
CDH13-203ENST00000431540 DDB1Q16531 1140 aa11.9□□□□□ -0.5
CDH13-203ENST00000431540 NUTM2GQ5VZR2 741 aa11.9□□□□□ -0.5
CDH13-203ENST00000431540 CABP1Q9NZU7 370 aa11.9□□□□□ -0.5
CDH13-203ENST00000431540 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
CDH13-203ENST00000431540 WNK3Q9BYP7 1800 aa11.9□□□□□ -0.5
CDH13-203ENST00000431540 KAT6BQ8WYB5 2073 aa11.9□□□□□ -0.51
CDH13-203ENST00000431540 WDR17Q8IZU2 1322 aa11.89□□□□□ -0.51
CDH13-203ENST00000431540 ARHGEF25Q86VW2 580 aa11.89□□□□□ -0.51
CDH13-203ENST00000431540 PUS7Q96PZ0 661 aaKnown RBP11.89□□□□□ -0.51
CDH13-203ENST00000431540 PCDHB13Q9Y5F0 798 aa11.89□□□□□ -0.51
CDH13-203ENST00000431540 NINLQ9Y2I6 1382 aa11.89□□□□□ -0.51
CDH13-203ENST00000431540 RGPD5Q99666 1765 aa11.88□□□□□ -0.51
CDH13-203ENST00000431540 CARD10Q9BWT7 1032 aa11.88□□□□□ -0.51
CDH13-203ENST00000431540 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
CDH13-203ENST00000431540 SBNO2Q9Y2G9 1366 aa11.88□□□□□ -0.51
CDH13-203ENST00000431540 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
CDH13-203ENST00000431540 CPSF1Q10570 1443 aaKnown RBP11.86□□□□□ -0.51
CDH13-203ENST00000431540 EXOC5O00471 708 aa11.86□□□□□ -0.51
CDH13-203ENST00000431540 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
CDH13-203ENST00000431540 TOM1L2Q6ZVM7 507 aa11.86□□□□□ -0.51
CDH13-203ENST00000431540 CCDC7Q96M83 1385 aa11.86□□□□□ -0.51
CDH13-203ENST00000431540 PIK3C2AO00443 1686 aa11.86□□□□□ -0.51
CDH13-203ENST00000431540 CHD4Q14839 1912 aa11.86□□□□□ -0.51
CDH13-203ENST00000431540 TTC21BQ7Z4L5 1316 aa11.86□□□□□ -0.51
CDH13-203ENST00000431540 HMGB2P26583 209 aaKnown RBP11.85□□□□□ -0.51
CDH13-203ENST00000431540 L3MBTL2Q969R5 705 aa11.85□□□□□ -0.51
CDH13-203ENST00000431540 LRRC37A3O60309 1634 aa11.85□□□□□ -0.51
CDH13-203ENST00000431540 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
CDH13-203ENST00000431540 CASZ1Q86V15 1759 aa11.83□□□□□ -0.52
CDH13-203ENST00000431540 PROM2Q8N271 834 aa11.83□□□□□ -0.52
CDH13-203ENST00000431540 PPP1R1BQ9UD71 204 aaPredicted RBP11.83□□□□□ -0.52
CDH13-203ENST00000431540 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
CDH13-203ENST00000431540 MON2Q7Z3U7 1717 aa11.83□□□□□ -0.52
CDH13-203ENST00000431540 MARCH10Q8NA82 808 aaPredicted RBP11.82□□□□□ -0.52
CDH13-203ENST00000431540 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
CDH13-203ENST00000431540 KRTAP3-3Q9BYR6 98 aa11.81□□□□□ -0.52
CDH13-203ENST00000431540 KRTAP3-2Q9BYR7 98 aa11.81□□□□□ -0.52
CDH13-203ENST00000431540 KTN1Q86UP2 1357 aaKnown RBP11.8□□□□□ -0.52
CDH13-203ENST00000431540 YY1P25490 414 aa11.8□□□□□ -0.52
CDH13-203ENST00000431540 IFNL1Q8IU54 200 aa11.8□□□□□ -0.52
CDH13-203ENST00000431540 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
CDH13-203ENST00000431540 NFAT5O94916 1531 aa11.8□□□□□ -0.52
CDH13-203ENST00000431540 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
CDH13-203ENST00000431540 SLC15A2Q16348 729 aa11.79□□□□□ -0.52
CDH13-203ENST00000431540 TXNRD1Q16881 649 aa11.79□□□□□ -0.52
CDH13-203ENST00000431540 STK32BQ9NY57 414 aa11.79□□□□□ -0.52
CDH13-203ENST00000431540 QSER1Q2KHR3 1735 aa11.79□□□□□ -0.52
CDH13-203ENST00000431540 LTN1O94822 1766 aa11.79□□□□□ -0.52
CDH13-203ENST00000431540 NHSQ6T4R5 1651 aa11.78□□□□□ -0.52
CDH13-203ENST00000431540 FAM208AQ9UK61 1670 aaKnown RBP11.78□□□□□ -0.52
CDH13-203ENST00000431540 CSB-PGBD3P0DP91 1061 aa11.78□□□□□ -0.52
CDH13-203ENST00000431540 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
CDH13-203ENST00000431540 MTFR1LQ9H019 292 aa11.78□□□□□ -0.52
CDH13-203ENST00000431540 OCEL1Q9H607 264 aa11.78□□□□□ -0.52
CDH13-203ENST00000431540 TERF2IPQ9NYB0 399 aa11.78□□□□□ -0.52
CDH13-203ENST00000431540 EMP3P54852 163 aa11.77□□□□□ -0.53
CDH13-203ENST00000431540 HDGFL2Q7Z4V5 671 aaPredicted RBP11.77□□□□□ -0.53
CDH13-203ENST00000431540 MIER1Q8N108 512 aa11.77□□□□□ -0.53
CDH13-203ENST00000431540 MAP3K5Q99683 1374 aa11.77□□□□□ -0.53
CDH13-203ENST00000431540 TNS2Q63HR2 1409 aa11.77□□□□□ -0.53
CDH13-203ENST00000431540 IL2RBP14784 551 aa11.76□□□□□ -0.53
CDH13-203ENST00000431540 COL24A1Q17RW2 1714 aa11.76□□□□□ -0.53
CDH13-203ENST00000431540 ERBB3P21860 1342 aa11.76□□□□□ -0.53
CDH13-203ENST00000431540 PTGER2P43116 358 aa11.75□□□□□ -0.53
CDH13-203ENST00000431540 SLC27A3Q5K4L6 730 aa11.75□□□□□ -0.53
CDH13-203ENST00000431540 EDC4Q6P2E9 1401 aaKnown RBP11.75□□□□□ -0.53
CDH13-203ENST00000431540 ZBTB7CA1YPR0 619 aa11.74□□□□□ -0.53
CDH13-203ENST00000431540 BTAF1O14981 1849 aa11.74□□□□□ -0.53
CDH13-203ENST00000431540 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
CDH13-203ENST00000431540 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
CDH13-203ENST00000431540 IP6K1Q92551 441 aa11.73□□□□□ -0.53
CDH13-203ENST00000431540 HS3ST6Q96QI5 342 aa11.73□□□□□ -0.53
CDH13-203ENST00000431540 SYT17Q9BSW7 474 aa11.73□□□□□ -0.53
CDH13-203ENST00000431540 ANO8Q9HCE9 1232 aaPredicted RBP11.73□□□□□ -0.53
CDH13-203ENST00000431540 CD163L1Q9NR16 1453 aa11.72□□□□□ -0.53
CDH13-203ENST00000431540 CGNL1Q0VF96 1302 aa11.72□□□□□ -0.53
CDH13-203ENST00000431540 SIN3AQ96ST3 1273 aa11.72□□□□□ -0.53
CDH13-203ENST00000431540 CARD11Q9BXL7 1154 aa11.72□□□□□ -0.53
CDH13-203ENST00000431540 NLRP2Q9NX02 1062 aa11.72□□□□□ -0.53
CDH13-203ENST00000431540 PAPPAQ13219 1627 aa11.71□□□□□ -0.54
CDH13-203ENST00000431540 PTF1AQ7RTS3 328 aa11.7□□□□□ -0.54
CDH13-203ENST00000431540 ANKRD24Q8TF21 1146 aa11.7□□□□□ -0.54
CDH13-203ENST00000431540 LY75O60449 1722 aa11.69□□□□□ -0.54
CDH13-203ENST00000431540 MYOM1P52179 1685 aa11.69□□□□□ -0.54
CDH13-203ENST00000431540 NEUROD1Q13562 356 aa11.69□□□□□ -0.54
CDH13-203ENST00000431540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDH13-203ENST00000431540 ARXQ96QS3 562 aa11.69□□□□□ -0.54
CDH13-203ENST00000431540 SLC12A5Q9H2X9 1139 aa11.69□□□□□ -0.54
CDH13-203ENST00000431540 FAM205CA6NFA0 338 aa11.68□□□□□ -0.54
CDH13-203ENST00000431540 ZBTB7AO95365 584 aa11.68□□□□□ -0.54
CDH13-203ENST00000431540 FHDC1Q9C0D6 1143 aaPredicted RBP11.68□□□□□ -0.54
CDH13-203ENST00000431540 KIF24Q5T7B8 1368 aa11.67□□□□□ -0.54
CDH13-203ENST00000431540 NME9Q86XW9 330 aa11.67□□□□□ -0.54
CDH13-203ENST00000431540 TMC1Q8TDI8 760 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms