RNA–Protein interactions for RNA: ENST00000417615.1

RPL3P4-201, Transcript of ribosomal protein L3 pseudogene 4, humanhuman

BASIC

Gene RPL3P4, Length 423 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P4-201ENST00000417615 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
RPL3P4-201ENST00000417615 CCDC9Q9Y3X0 531 aaKnown RBP11.24□□□□□ -0.61
RPL3P4-201ENST00000417615 MAP3K19Q56UN5 1328 aa11.24□□□□□ -0.61
RPL3P4-201ENST00000417615 PARP4Q9UKK3 1724 aaKnown RBP11.23□□□□□ -0.61
RPL3P4-201ENST00000417615 FAM98CQ17RN3 349 aaKnown RBP11.23□□□□□ -0.61
RPL3P4-201ENST00000417615 SEPT12Q8IYM1 358 aa11.23□□□□□ -0.61
RPL3P4-201ENST00000417615 CRB1P82279 1406 aa11.23□□□□□ -0.61
RPL3P4-201ENST00000417615 EP400Q96L91 3159 aa11.23□□□□□ -0.61
RPL3P4-201ENST00000417615 PER1O15534 1290 aaPredicted RBP11.22□□□□□ -0.61
RPL3P4-201ENST00000417615 EVA1CP58658 441 aa11.22□□□□□ -0.61
RPL3P4-201ENST00000417615 RRS1Q15050 365 aaKnown RBP11.22□□□□□ -0.61
RPL3P4-201ENST00000417615 WDR17Q8IZU2 1322 aa11.22□□□□□ -0.61
RPL3P4-201ENST00000417615 FAM208AQ9UK61 1670 aaKnown RBP11.21□□□□□ -0.61
RPL3P4-201ENST00000417615 ERBB3P21860 1342 aa11.21□□□□□ -0.61
RPL3P4-201ENST00000417615 CGNL1Q0VF96 1302 aa11.21□□□□□ -0.61
RPL3P4-201ENST00000417615 IP6K1Q92551 441 aa11.21□□□□□ -0.61
RPL3P4-201ENST00000417615 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
RPL3P4-201ENST00000417615 BLMP54132 1417 aaPredicted RBP11.2□□□□□ -0.62
RPL3P4-201ENST00000417615 HOXC9P31274 260 aa11.2□□□□□ -0.62
RPL3P4-201ENST00000417615 BARGINQ6ZT62 677 aa11.2□□□□□ -0.62
RPL3P4-201ENST00000417615 TCP11L2Q8N4U5 519 aa11.2□□□□□ -0.62
RPL3P4-201ENST00000417615 UPF1Q92900 1129 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPL3P4-201ENST00000417615 USP35Q9P2H5 1018 aa11.2□□□□□ -0.62
RPL3P4-201ENST00000417615 DISP2A7MBM2 1401 aa11.19□□□□□ -0.62
RPL3P4-201ENST00000417615 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
RPL3P4-201ENST00000417615 MIER1Q8N108 512 aa11.19□□□□□ -0.62
RPL3P4-201ENST00000417615 ANKRD24Q8TF21 1146 aa11.19□□□□□ -0.62
RPL3P4-201ENST00000417615 EMILIN1Q9Y6C2 1016 aa11.19□□□□□ -0.62
RPL3P4-201ENST00000417615 RTL1A6NKG5 1358 aa11.18□□□□□ -0.62
RPL3P4-201ENST00000417615 TOM1L2Q6ZVM7 507 aa11.18□□□□□ -0.62
RPL3P4-201ENST00000417615 CARD10Q9BWT7 1032 aa11.18□□□□□ -0.62
RPL3P4-201ENST00000417615 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
RPL3P4-201ENST00000417615 THRAP3Q9Y2W1 955 aaKnown RBP11.18□□□□□ -0.62
RPL3P4-201ENST00000417615 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
RPL3P4-201ENST00000417615 NSD2O96028 1365 aa11.17□□□□□ -0.62
RPL3P4-201ENST00000417615 AMPHP49418 695 aa11.17□□□□□ -0.62
RPL3P4-201ENST00000417615 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
RPL3P4-201ENST00000417615 POLKQ9UBT6 870 aa11.17□□□□□ -0.62
RPL3P4-201ENST00000417615 SHANK3Q9BYB0 1731 aa11.17□□□□□ -0.62
RPL3P4-201ENST00000417615 INSRP06213 1382 aa11.16□□□□□ -0.62
RPL3P4-201ENST00000417615 CSB-PGBD3P0DP91 1061 aa11.16□□□□□ -0.62
RPL3P4-201ENST00000417615 FAM182BQ5T319 152 aa11.16□□□□□ -0.62
RPL3P4-201ENST00000417615 KRT27Q7Z3Y8 459 aa11.16□□□□□ -0.62
RPL3P4-201ENST00000417615 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
RPL3P4-201ENST00000417615 LTV1Q96GA3 475 aaPredicted RBP11.16□□□□□ -0.62
RPL3P4-201ENST00000417615 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
RPL3P4-201ENST00000417615 SMG6Q86US8 1419 aaKnown RBP11.16□□□□□ -0.62
RPL3P4-201ENST00000417615 FLT4P35916 1363 aa11.16□□□□□ -0.62
RPL3P4-201ENST00000417615 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
RPL3P4-201ENST00000417615 TNS1Q9HBL0 1735 aaKnown RBP11.15□□□□□ -0.62
RPL3P4-201ENST00000417615 A0A0G2JS52 829 aa11.15□□□□□ -0.62
RPL3P4-201ENST00000417615 TNNT2P45379 298 aaPredicted RBP11.15□□□□□ -0.62
RPL3P4-201ENST00000417615 MYT1Q01538 1121 aa11.15□□□□□ -0.62
RPL3P4-201ENST00000417615 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
RPL3P4-201ENST00000417615 NPC1L1Q9UHC9 1359 aa11.14□□□□□ -0.63
RPL3P4-201ENST00000417615 RGPD1P0DJD0 1748 aa11.13□□□□□ -0.63
RPL3P4-201ENST00000417615 NCAPD2Q15021 1401 aa11.13□□□□□ -0.63
RPL3P4-201ENST00000417615 CLCN6P51797 869 aa11.13□□□□□ -0.63
RPL3P4-201ENST00000417615 NBPF6Q5VWK0 638 aa11.13□□□□□ -0.63
RPL3P4-201ENST00000417615 MORC1Q86VD1 984 aa11.13□□□□□ -0.63
RPL3P4-201ENST00000417615 NBPF4Q96M43 638 aa11.13□□□□□ -0.63
RPL3P4-201ENST00000417615 MEGF6O75095 1541 aa11.12□□□□□ -0.63
RPL3P4-201ENST00000417615 TNS2Q63HR2 1409 aa11.11□□□□□ -0.63
RPL3P4-201ENST00000417615 PPM1GO15355 546 aaPredicted RBP11.11□□□□□ -0.63
RPL3P4-201ENST00000417615 CC2D1BQ5T0F9 858 aaKnown RBP11.11□□□□□ -0.63
RPL3P4-201ENST00000417615 USHBP1Q8N6Y0 703 aa11.11□□□□□ -0.63
RPL3P4-201ENST00000417615 MARCH10Q8NA82 808 aaPredicted RBP11.11□□□□□ -0.63
RPL3P4-201ENST00000417615 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
RPL3P4-201ENST00000417615 PKD1L3Q7Z443 1732 aa11.1□□□□□ -0.63
RPL3P4-201ENST00000417615 IL2RBP14784 551 aa11.1□□□□□ -0.63
RPL3P4-201ENST00000417615 EIF4A2Q14240 407 aaKnown RBP11.1□□□□□ -0.63
RPL3P4-201ENST00000417615 DDB1Q16531 1140 aa11.1□□□□□ -0.63
RPL3P4-201ENST00000417615 CDCA7Q9BWT1 371 aaPredicted RBP11.1□□□□□ -0.63
RPL3P4-201ENST00000417615 GALR2O43603 387 aaPredicted RBP11.09□□□□□ -0.63
RPL3P4-201ENST00000417615 PDE3BQ13370 1112 aa11.09□□□□□ -0.63
RPL3P4-201ENST00000417615 EYA1Q99502 592 aa11.09□□□□□ -0.63
RPL3P4-201ENST00000417615 COL3A1P02461 1466 aaPredicted RBP11.08□□□□□ -0.64
RPL3P4-201ENST00000417615 CNGB1Q14028 1251 aaPredicted RBP11.08□□□□□ -0.64
RPL3P4-201ENST00000417615 PTF1AQ7RTS3 328 aa11.08□□□□□ -0.64
RPL3P4-201ENST00000417615 OVOS2A0A0G2JMS6 1433 aa11.08□□□□□ -0.64
RPL3P4-201ENST00000417615 BCL9O00512 1426 aa11.08□□□□□ -0.64
RPL3P4-201ENST00000417615 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
RPL3P4-201ENST00000417615 EXOC5O00471 708 aa11.07□□□□□ -0.64
RPL3P4-201ENST00000417615 MTHFSP49914 203 aa11.07□□□□□ -0.64
RPL3P4-201ENST00000417615 FAM196AQ6ZSG2 479 aa11.07□□□□□ -0.64
RPL3P4-201ENST00000417615 DEFB132Q7Z7B7 95 aa11.07□□□□□ -0.64
RPL3P4-201ENST00000417615 NHSQ6T4R5 1651 aa11.07□□□□□ -0.64
RPL3P4-201ENST00000417615 TRIM37O94972 964 aa11.06□□□□□ -0.64
RPL3P4-201ENST00000417615 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
RPL3P4-201ENST00000417615 ZBTB47Q9UFB7 747 aaPredicted RBP11.06□□□□□ -0.64
RPL3P4-201ENST00000417615 BTAF1O14981 1849 aa11.06□□□□□ -0.64
RPL3P4-201ENST00000417615 DOT1LQ8TEK3 1739 aa11.06□□□□□ -0.64
RPL3P4-201ENST00000417615 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
RPL3P4-201ENST00000417615 RREB1Q92766 1687 aa11.05□□□□□ -0.64
RPL3P4-201ENST00000417615 ITGB4P16144 1822 aa11.05□□□□□ -0.64
RPL3P4-201ENST00000417615 IL13P35225 146 aa11.05□□□□□ -0.64
RPL3P4-201ENST00000417615 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
RPL3P4-201ENST00000417615 DDX10Q13206 875 aaKnown RBP11.05□□□□□ -0.64
RPL3P4-201ENST00000417615 TOGARAM1Q9Y4F4 1720 aa11.05□□□□□ -0.64
RPL3P4-201ENST00000417615 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms