RNA–Protein interactions for RNA: ENST00000417599.6

SMARCA2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-211ENST00000417599 ALDH1A1P00352 501 aa11.92□□□□□ -0.5
SMARCA2-211ENST00000417599 PPP1R12CQ9BZL4 782 aa11.92□□□□□ -0.5
SMARCA2-211ENST00000417599 TTC24A2A3L6 582 aaPredicted RBP11.91□□□□□ -0.5
SMARCA2-211ENST00000417599 TNFRSF10AO00220 468 aa11.91□□□□□ -0.5
SMARCA2-211ENST00000417599 ATP9BO43861 1147 aa11.91□□□□□ -0.5
SMARCA2-211ENST00000417599 DHX9Q08211 1270 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-211ENST00000417599 ARID3AQ99856 593 aa11.91□□□□□ -0.5
SMARCA2-211ENST00000417599 WASF2Q9Y6W5 498 aa11.91□□□□□ -0.5
SMARCA2-211ENST00000417599 PALM3A6NDB9 673 aaPredicted RBP11.9□□□□□ -0.5
SMARCA2-211ENST00000417599 SKIP12755 728 aa11.9□□□□□ -0.5
SMARCA2-211ENST00000417599 MAP7D1Q3KQU3 841 aa11.9□□□□□ -0.5
SMARCA2-211ENST00000417599 INTS6LQ5JSJ4 861 aaKnown RBP11.9□□□□□ -0.5
SMARCA2-211ENST00000417599 NUP160Q12769 1436 aa11.89□□□□□ -0.51
SMARCA2-211ENST00000417599 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
SMARCA2-211ENST00000417599 PHTF2Q8N3S3 785 aa11.89□□□□□ -0.51
SMARCA2-211ENST00000417599 PLPP7Q8NBV4 271 aa11.89□□□□□ -0.51
SMARCA2-211ENST00000417599 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
SMARCA2-211ENST00000417599 GRM5P41594 1212 aa11.88□□□□□ -0.51
SMARCA2-211ENST00000417599 TBC1D9Q6ZT07 1266 aa11.88□□□□□ -0.51
SMARCA2-211ENST00000417599 TOR4AQ9NXH8 423 aa11.88□□□□□ -0.51
SMARCA2-211ENST00000417599 DOLKQ9UPQ8 538 aa11.88□□□□□ -0.51
SMARCA2-211ENST00000417599 MAFBQ9Y5Q3 323 aaPredicted RBP11.88□□□□□ -0.51
SMARCA2-211ENST00000417599 CLASP1Q7Z460 1538 aa11.87□□□□□ -0.51
SMARCA2-211ENST00000417599 USP17L5A8MUK1 530 aa11.87□□□□□ -0.51
SMARCA2-211ENST00000417599 LZTS3O60299 673 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-211ENST00000417599 RAB15P59190 212 aa11.87□□□□□ -0.51
SMARCA2-211ENST00000417599 TRIM67Q6ZTA4 783 aa11.87□□□□□ -0.51
SMARCA2-211ENST00000417599 CCDC116Q8IYX3 515 aa11.87□□□□□ -0.51
SMARCA2-211ENST00000417599 TFIP11Q9UBB9 837 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-211ENST00000417599 CHIC2Q9UKJ5 165 aa11.87□□□□□ -0.51
SMARCA2-211ENST00000417599 RAPGEF2Q9Y4G8 1499 aa11.87□□□□□ -0.51
SMARCA2-211ENST00000417599 CEP170Q5SW79 1584 aa11.87□□□□□ -0.51
SMARCA2-211ENST00000417599 PLEKHM2Q8IWE5 1019 aa11.86□□□□□ -0.51
SMARCA2-211ENST00000417599 PDZRN3Q9UPQ7 1066 aa11.86□□□□□ -0.51
SMARCA2-211ENST00000417599 PCDHB11Q9Y5F2 797 aa11.86□□□□□ -0.51
SMARCA2-211ENST00000417599 USP17L3A6NCW0 530 aa11.85□□□□□ -0.51
SMARCA2-211ENST00000417599 USP17L4A6NCW7 530 aa11.85□□□□□ -0.51
SMARCA2-211ENST00000417599 CFAP70Q5T0N1 1121 aa11.85□□□□□ -0.51
SMARCA2-211ENST00000417599 USP17L2Q6R6M4 530 aa11.85□□□□□ -0.51
SMARCA2-211ENST00000417599 USP17L1Q7RTZ2 530 aa11.85□□□□□ -0.51
SMARCA2-211ENST00000417599 NNTQ13423 1086 aa11.84□□□□□ -0.51
SMARCA2-211ENST00000417599 FAM9AQ8IZU1 332 aaPredicted RBP11.84□□□□□ -0.51
SMARCA2-211ENST00000417599 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
SMARCA2-211ENST00000417599 CCDC85AQ96PX6 553 aaPredicted RBP11.84□□□□□ -0.51
SMARCA2-211ENST00000417599 PGPEP1Q9NXJ5 209 aa11.84□□□□□ -0.51
SMARCA2-211ENST00000417599 EMILIN1Q9Y6C2 1016 aa11.84□□□□□ -0.51
SMARCA2-211ENST00000417599 ERVH48-1M5A8F1 160 aa11.83□□□□□ -0.52
SMARCA2-211ENST00000417599 LMOD1P29536 600 aaPredicted RBP11.83□□□□□ -0.52
SMARCA2-211ENST00000417599 EML3Q32P44 896 aa11.83□□□□□ -0.52
SMARCA2-211ENST00000417599 J3QL48 77 aa11.82□□□□□ -0.52
SMARCA2-211ENST00000417599 OXLD1Q5BKU9 147 aa11.82□□□□□ -0.52
SMARCA2-211ENST00000417599 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
SMARCA2-211ENST00000417599 MYCP01106 439 aaPredicted RBP11.81□□□□□ -0.52
SMARCA2-211ENST00000417599 NR3C2P08235 984 aa11.81□□□□□ -0.52
SMARCA2-211ENST00000417599 PPP1R26Q5T8A7 1209 aaPredicted RBP11.81□□□□□ -0.52
SMARCA2-211ENST00000417599 ESF1Q9H501 851 aaKnown RBP11.81□□□□□ -0.52
SMARCA2-211ENST00000417599 KIAA0586Q9BVV6 1533 aa11.81□□□□□ -0.52
SMARCA2-211ENST00000417599 KIF21BO75037 1637 aa11.8□□□□□ -0.52
SMARCA2-211ENST00000417599 SMPD1P17405 629 aa11.8□□□□□ -0.52
SMARCA2-211ENST00000417599 NCOA4Q13772 614 aa11.8□□□□□ -0.52
SMARCA2-211ENST00000417599 SHROOM2Q13796 1616 aa11.79□□□□□ -0.52
SMARCA2-211ENST00000417599 PPP1R15AO75807 674 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-211ENST00000417599 USP4Q13107 963 aa11.79□□□□□ -0.52
SMARCA2-211ENST00000417599 PBXIP1Q96AQ6 731 aa11.79□□□□□ -0.52
SMARCA2-211ENST00000417599 NOD1Q9Y239 953 aa11.79□□□□□ -0.52
SMARCA2-211ENST00000417599 RFX1P22670 979 aa11.78□□□□□ -0.52
SMARCA2-211ENST00000417599 MYT1Q01538 1121 aa11.78□□□□□ -0.52
SMARCA2-211ENST00000417599 CC2D2BQ6DHV5 1058 aa11.78□□□□□ -0.52
SMARCA2-211ENST00000417599 TRIM50Q86XT4 487 aa11.78□□□□□ -0.52
SMARCA2-211ENST00000417599 DEPDC4Q8N2C3 294 aa11.78□□□□□ -0.52
SMARCA2-211ENST00000417599 ATP5J2-PTCD1G3V325 749 aa11.77□□□□□ -0.53
SMARCA2-211ENST00000417599 ERVK-9P63128 1117 aa11.77□□□□□ -0.53
SMARCA2-211ENST00000417599 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
SMARCA2-211ENST00000417599 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
SMARCA2-211ENST00000417599 NRG2O14511 850 aaPredicted RBP11.76□□□□□ -0.53
SMARCA2-211ENST00000417599 LAPTM4AQ15012 233 aa11.76□□□□□ -0.53
SMARCA2-211ENST00000417599 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
SMARCA2-211ENST00000417599 CDCA7Q9BWT1 371 aaPredicted RBP11.76□□□□□ -0.53
SMARCA2-211ENST00000417599 VRTNQ9H8Y1 702 aa11.76□□□□□ -0.53
SMARCA2-211ENST00000417599 TMPRSS4Q9NRS4 437 aa11.76□□□□□ -0.53
SMARCA2-211ENST00000417599 CTTNBP2Q8WZ74 1663 aa11.75□□□□□ -0.53
SMARCA2-211ENST00000417599 FAM187AA6NFU0 413 aa11.75□□□□□ -0.53
SMARCA2-211ENST00000417599 ATP1A2P50993 1020 aa11.75□□□□□ -0.53
SMARCA2-211ENST00000417599 WDR4P57081 412 aaKnown RBP11.75□□□□□ -0.53
SMARCA2-211ENST00000417599 CYLDQ9NQC7 956 aa11.75□□□□□ -0.53
SMARCA2-211ENST00000417599 IQGAP2Q13576 1575 aa11.75□□□□□ -0.53
SMARCA2-211ENST00000417599 RIMBP3CA6NJZ7 1639 aa11.75□□□□□ -0.53
SMARCA2-211ENST00000417599 RIMBP3BA6NNM3 1639 aa11.75□□□□□ -0.53
SMARCA2-211ENST00000417599 RIMBP3Q9UFD9 1639 aa11.75□□□□□ -0.53
SMARCA2-211ENST00000417599 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-211ENST00000417599 MKRN1Q9UHC7 482 aaKnown RBP11.74□□□□□ -0.53
SMARCA2-211ENST00000417599 GFRA3O60609 400 aa11.73□□□□□ -0.53
SMARCA2-211ENST00000417599 ZIC2O95409 532 aaPredicted RBP11.73□□□□□ -0.53
SMARCA2-211ENST00000417599 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
SMARCA2-211ENST00000417599 SCTRP47872 440 aa11.72□□□□□ -0.53
SMARCA2-211ENST00000417599 CYP2U1Q7Z449 544 aa11.72□□□□□ -0.53
SMARCA2-211ENST00000417599 HPS1Q92902 700 aa11.72□□□□□ -0.53
SMARCA2-211ENST00000417599 ITPKCQ96DU7 683 aa11.72□□□□□ -0.53
SMARCA2-211ENST00000417599 ERCC6L2Q5T890 1561 aa11.71□□□□□ -0.53
SMARCA2-211ENST00000417599 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms