RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 EEA1Q15075 1411 aa12.79□□□□□ -0.36
TRA2B-204ENST00000414862 GPR37L1O60883 481 aa12.79□□□□□ -0.36
TRA2B-204ENST00000414862 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
TRA2B-204ENST00000414862 STRCQ7RTU9 1775 aa12.78□□□□□ -0.36
TRA2B-204ENST00000414862 BAP1Q92560 729 aa12.77□□□□□ -0.37
TRA2B-204ENST00000414862 ESF1Q9H501 851 aaKnown RBP12.77□□□□□ -0.37
TRA2B-204ENST00000414862 ZC3H4Q9UPT8 1303 aaKnown RBP12.77□□□□□ -0.37
TRA2B-204ENST00000414862 ARHGAP5Q13017 1502 aa12.77□□□□□ -0.37
TRA2B-204ENST00000414862 KDM5CP41229 1560 aa12.77□□□□□ -0.37
TRA2B-204ENST00000414862 RPIAP49247 311 aa12.76□□□□□ -0.37
TRA2B-204ENST00000414862 NBPF14Q5TI25 921 aa12.76□□□□□ -0.37
TRA2B-204ENST00000414862 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-204ENST00000414862 CDK11AQ9UQ88 783 aaPredicted RBP12.76□□□□□ -0.37
TRA2B-204ENST00000414862 KIF14Q15058 1648 aa12.76□□□□□ -0.37
TRA2B-204ENST00000414862 MYO5CQ9NQX4 1742 aa12.76□□□□□ -0.37
TRA2B-204ENST00000414862 TRIM32Q13049 653 aa12.75□□□□□ -0.37
TRA2B-204ENST00000414862 IRF5Q13568 498 aa12.75□□□□□ -0.37
TRA2B-204ENST00000414862 LINC01559Q495D7 138 aa12.75□□□□□ -0.37
TRA2B-204ENST00000414862 LIAT1Q6ZQX7 453 aa12.75□□□□□ -0.37
TRA2B-204ENST00000414862 WWC1Q8IX03 1113 aa12.75□□□□□ -0.37
TRA2B-204ENST00000414862 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.371e-18■■□□□ 12.2
TRA2B-204ENST00000414862 REREQ9P2R6 1566 aa12.75□□□□□ -0.37
TRA2B-204ENST00000414862 DIP2CQ9Y2E4 1556 aa12.74□□□□□ -0.37
TRA2B-204ENST00000414862 CLIP1P30622 1438 aa12.74□□□□□ -0.37
TRA2B-204ENST00000414862 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
TRA2B-204ENST00000414862 EMID1Q96A84 441 aaPredicted RBP12.74□□□□□ -0.37
TRA2B-204ENST00000414862 FMN1Q68DA7 1419 aa12.73□□□□□ -0.37
TRA2B-204ENST00000414862 TRAPPC8Q9Y2L5 1435 aa12.73□□□□□ -0.37
TRA2B-204ENST00000414862 CD2BP2O95400 341 aaKnown RBP12.73□□□□□ -0.37
TRA2B-204ENST00000414862 SLC19A1P41440 591 aa12.73□□□□□ -0.37
TRA2B-204ENST00000414862 PDXDC2PQ6P474 469 aa12.73□□□□□ -0.37
TRA2B-204ENST00000414862 FNBP4Q8N3X1 1017 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-204ENST00000414862 LTBP4Q8N2S1 1624 aa12.73□□□□□ -0.37
TRA2B-204ENST00000414862 CNTLNQ9NXG0 1405 aa12.72□□□□□ -0.37
TRA2B-204ENST00000414862 AFAP1Q8N556 730 aa12.72□□□□□ -0.37
TRA2B-204ENST00000414862 ZNF511Q8NB15 262 aa12.72□□□□□ -0.37
TRA2B-204ENST00000414862 TROQ12816 1431 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-204ENST00000414862 SETD1BQ9UPS6 1966 aaKnown RBP12.71□□□□□ -0.37
TRA2B-204ENST00000414862 TRAK2O60296 914 aa12.71□□□□□ -0.37
TRA2B-204ENST00000414862 AGLP35573 1532 aa12.71□□□□□ -0.38
TRA2B-204ENST00000414862 MLH3Q9UHC1 1453 aa12.71□□□□□ -0.38
TRA2B-204ENST00000414862 C3P01024 1663 aa12.7□□□□□ -0.38
TRA2B-204ENST00000414862 ABCA6Q8N139 1617 aa12.7□□□□□ -0.38
TRA2B-204ENST00000414862 SH3BP2P78314 561 aa12.7□□□□□ -0.38
TRA2B-204ENST00000414862 PTK2Q05397 1052 aa12.7□□□□□ -0.38
TRA2B-204ENST00000414862 WASHC4Q2M389 1173 aa12.7□□□□□ -0.38
TRA2B-204ENST00000414862 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
TRA2B-204ENST00000414862 ZBBXA8MT70 800 aa12.69□□□□□ -0.38
TRA2B-204ENST00000414862 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
TRA2B-204ENST00000414862 GPSM3Q9Y4H4 160 aa12.69□□□□□ -0.38
TRA2B-204ENST00000414862 FBXO45P0C2W1 286 aa12.68□□□□□ -0.38
TRA2B-204ENST00000414862 WNT7BP56706 349 aa12.68□□□□□ -0.38
TRA2B-204ENST00000414862 AGERQ15109 404 aa12.68□□□□□ -0.38
TRA2B-204ENST00000414862 FOXJ1Q92949 421 aa12.68□□□□□ -0.38
TRA2B-204ENST00000414862 PRKD2Q9BZL6 878 aa12.68□□□□□ -0.38
TRA2B-204ENST00000414862 NPATQ14207 1427 aa12.68□□□□□ -0.38
TRA2B-204ENST00000414862 UBAP1LF5GYI3 381 aa12.67□□□□□ -0.38
TRA2B-204ENST00000414862 SKOR1P84550 965 aa12.67□□□□□ -0.38
TRA2B-204ENST00000414862 VAC14Q08AM6 782 aa12.67□□□□□ -0.38
TRA2B-204ENST00000414862 NR1H3Q13133 447 aa12.67□□□□□ -0.38
TRA2B-204ENST00000414862 BPHLQ86WA6 291 aaPredicted RBP12.67□□□□□ -0.38
TRA2B-204ENST00000414862 ARHGAP9Q9BRR9 750 aa12.67□□□□□ -0.38
TRA2B-204ENST00000414862 ABCC1P33527 1531 aa12.67□□□□□ -0.38
TRA2B-204ENST00000414862 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
TRA2B-204ENST00000414862 SPRYD7Q5W111 196 aa12.66□□□□□ -0.38
TRA2B-204ENST00000414862 MAGEB6P1A0A0J9YX57 407 aa12.65□□□□□ -0.38
TRA2B-204ENST00000414862 SH3RF1Q7Z6J0 888 aa12.65□□□□□ -0.38
TRA2B-204ENST00000414862 OCSTAMPQ9BR26 566 aa12.65□□□□□ -0.38
TRA2B-204ENST00000414862 V9GY48 417 aaPredicted RBP12.65□□□□□ -0.38
TRA2B-204ENST00000414862 ZBTB33Q86T24 672 aa12.64□□□□□ -0.39
TRA2B-204ENST00000414862 CARD14Q9BXL6 1004 aa12.64□□□□□ -0.39
TRA2B-204ENST00000414862 ZNF335Q9H4Z2 1342 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-204ENST00000414862 C4orf48Q5BLP8 95 aa12.63□□□□□ -0.39
TRA2B-204ENST00000414862 PREX2Q70Z35 1606 aa12.62□□□□□ -0.39
TRA2B-204ENST00000414862 PLA2R1Q13018 1463 aa12.62□□□□□ -0.39
TRA2B-204ENST00000414862 ARHGAP35Q9NRY4 1499 aa12.62□□□□□ -0.39
TRA2B-204ENST00000414862 POM121CA8CG34 1229 aa12.62□□□□□ -0.39
TRA2B-204ENST00000414862 RC3H1Q5TC82 1133 aaKnown RBP12.62□□□□□ -0.39
TRA2B-204ENST00000414862 ADAM32Q8TC27 787 aa12.62□□□□□ -0.39
TRA2B-204ENST00000414862 ZNF777Q9ULD5 760 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-204ENST00000414862 MROH2AA6NES4 1674 aa12.61□□□□□ -0.39
TRA2B-204ENST00000414862 ZNF697Q5TEC3 545 aa12.61□□□□□ -0.39
TRA2B-204ENST00000414862 ZNF598Q86UK7 904 aaKnown RBP12.61□□□□□ -0.39
TRA2B-204ENST00000414862 ITSN2Q9NZM3 1697 aa12.61□□□□□ -0.39
TRA2B-204ENST00000414862 ZMYM3Q14202 1370 aa12.6□□□□□ -0.39
TRA2B-204ENST00000414862 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRA2B-204ENST00000414862 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
TRA2B-204ENST00000414862 CCDC18Q5T9S5 1454 aa12.59□□□□□ -0.39
TRA2B-204ENST00000414862 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
TRA2B-204ENST00000414862 VARSP26640 1264 aaKnown RBP12.59□□□□□ -0.39
TRA2B-204ENST00000414862 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.39
TRA2B-204ENST00000414862 ZNF142P52746 1687 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-204ENST00000414862 ERFEQ4G0M1 354 aa12.58□□□□□ -0.4
TRA2B-204ENST00000414862 CEP170BQ9Y4F5 1589 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-204ENST00000414862 CDC42BPBQ9Y5S2 1711 aa12.58□□□□□ -0.4
TRA2B-204ENST00000414862 TCOF1Q13428 1488 aaKnown RBP12.58□□□□□ -0.4
TRA2B-204ENST00000414862 WNT7AO00755 349 aa12.57□□□□□ -0.4
TRA2B-204ENST00000414862 FAM174AQ8TBP5 190 aa12.57□□□□□ -0.4
TRA2B-204ENST00000414862 C1QTNF2Q9BXJ5 285 aa12.57□□□□□ -0.4
TRA2B-204ENST00000414862 PCDHB9Q9Y5E1 797 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms