RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-205ENST00000413658 DIAPH1O60610 1272 aaKnown RBP13.82□□□□□ -0.2
ZNF3-205ENST00000413658 CCDC184Q52MB2 194 aa13.82□□□□□ -0.2
ZNF3-205ENST00000413658 BARGINQ6ZT62 677 aa13.82□□□□□ -0.2
ZNF3-205ENST00000413658 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
ZNF3-205ENST00000413658 USHBP1Q8N6Y0 703 aa13.82□□□□□ -0.2
ZNF3-205ENST00000413658 THRAP3Q9Y2W1 955 aaKnown RBP13.82□□□□□ -0.2
ZNF3-205ENST00000413658 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
ZNF3-205ENST00000413658 SHANK3Q9BYB0 1731 aa13.82□□□□□ -0.2
ZNF3-205ENST00000413658 LRRC37A3O60309 1634 aa13.82□□□□□ -0.2
ZNF3-205ENST00000413658 CFAP53Q96M91 514 aa13.81□□□□□ -0.2
ZNF3-205ENST00000413658 USP35Q9P2H5 1018 aa13.81□□□□□ -0.2
ZNF3-205ENST00000413658 EP400Q96L91 3159 aa13.81□□□□□ -0.2
ZNF3-205ENST00000413658 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
ZNF3-205ENST00000413658 RXRBP28702 533 aa13.81□□□□□ -0.2
ZNF3-205ENST00000413658 FAM98CQ17RN3 349 aaKnown RBP13.81□□□□□ -0.2
ZNF3-205ENST00000413658 KDRP35968 1356 aa13.81□□□□□ -0.2
ZNF3-205ENST00000413658 MEGF6O75095 1541 aa13.8□□□□□ -0.2
ZNF3-205ENST00000413658 RGS12O14924 1447 aa13.79□□□□□ -0.2
ZNF3-205ENST00000413658 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
ZNF3-205ENST00000413658 OVOS2A0A0G2JMS6 1433 aa13.78□□□□□ -0.2
ZNF3-205ENST00000413658 SULT6B1Q6IMI4 303 aa13.77□□□□□ -0.21
ZNF3-205ENST00000413658 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
ZNF3-205ENST00000413658 IL2RBP14784 551 aa13.76□□□□□ -0.21
ZNF3-205ENST00000413658 SEPT12Q8IYM1 358 aa13.76□□□□□ -0.21
ZNF3-205ENST00000413658 MIER1Q8N108 512 aa13.76□□□□□ -0.21
ZNF3-205ENST00000413658 CDCA7Q9BWT1 371 aaPredicted RBP13.76□□□□□ -0.21
ZNF3-205ENST00000413658 TNS2Q63HR2 1409 aa13.75□□□□□ -0.21
ZNF3-205ENST00000413658 HMOX1P09601 288 aa13.75□□□□□ -0.21
ZNF3-205ENST00000413658 NUDCQ9Y266 331 aa13.75□□□□□ -0.21
ZNF3-205ENST00000413658 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
ZNF3-205ENST00000413658 VIRMAQ69YN4 1812 aaKnown RBP13.75□□□□□ -0.21
ZNF3-205ENST00000413658 RSPH6AQ9H0K4 717 aa13.74□□□□□ -0.21
ZNF3-205ENST00000413658 U2AF1L5P0DN76 240 aaPredicted RBP13.73□□□□□ -0.21
ZNF3-205ENST00000413658 U2AF1Q01081 240 aaKnown RBP eCLIP13.73□□□□□ -0.21
ZNF3-205ENST00000413658 RAPGEF4Q8WZA2 1011 aa13.73□□□□□ -0.21
ZNF3-205ENST00000413658 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
ZNF3-205ENST00000413658 FCHSD2O94868 740 aa13.73□□□□□ -0.21
ZNF3-205ENST00000413658 TATP17735 454 aaPredicted RBP13.73□□□□□ -0.21
ZNF3-205ENST00000413658 PNISRQ8TF01 805 aaKnown RBP13.73□□□□□ -0.21
ZNF3-205ENST00000413658 MRS2Q9HD23 443 aa13.73□□□□□ -0.21
ZNF3-205ENST00000413658 DLG5Q8TDM6 1919 aa13.73□□□□□ -0.21
ZNF3-205ENST00000413658 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
ZNF3-205ENST00000413658 ADAMTS8Q9UP79 889 aa13.72□□□□□ -0.21
ZNF3-205ENST00000413658 DDB1Q16531 1140 aa13.71□□□□□ -0.22
ZNF3-205ENST00000413658 ZCRB1Q8TBF4 217 aaKnown RBP13.71□□□□□ -0.22
ZNF3-205ENST00000413658 PLEKHF1Q96S99 279 aa13.71□□□□□ -0.22
ZNF3-205ENST00000413658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.222e-6■□□□□ 9.6
ZNF3-205ENST00000413658 A0A0G2JS52 829 aa13.7□□□□□ -0.22
ZNF3-205ENST00000413658 EXOC5O00471 708 aa13.7□□□□□ -0.22
ZNF3-205ENST00000413658 ABCB7O75027 752 aa13.7□□□□□ -0.22
ZNF3-205ENST00000413658 PRKAR2BP31323 418 aa13.7□□□□□ -0.22
ZNF3-205ENST00000413658 DSG3P32926 999 aa13.7□□□□□ -0.22
ZNF3-205ENST00000413658 PHACTR3Q96KR7 559 aa13.7□□□□□ -0.22
ZNF3-205ENST00000413658 BCL11AQ9H165 835 aa13.7□□□□□ -0.22
ZNF3-205ENST00000413658 CYP27B1O15528 508 aa13.69□□□□□ -0.22
ZNF3-205ENST00000413658 POLA2Q14181 598 aa13.69□□□□□ -0.22
ZNF3-205ENST00000413658 WDR43Q15061 677 aaKnown RBP eCLIP13.69□□□□□ -0.22
ZNF3-205ENST00000413658 ILDR2Q71H61 639 aa13.69□□□□□ -0.22
ZNF3-205ENST00000413658 KRT27Q7Z3Y8 459 aa13.69□□□□□ -0.22
ZNF3-205ENST00000413658 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
ZNF3-205ENST00000413658 TOGARAM1Q9Y4F4 1720 aa13.69□□□□□ -0.22
ZNF3-205ENST00000413658 KAT6BQ8WYB5 2073 aa13.68□□□□□ -0.22
ZNF3-205ENST00000413658 SCN11AQ9UI33 1791 aa13.68□□□□□ -0.22
ZNF3-205ENST00000413658 ADAMTS7Q9UKP4 1686 aa13.68□□□□□ -0.22
ZNF3-205ENST00000413658 ITGB4P16144 1822 aa13.68□□□□□ -0.22
ZNF3-205ENST00000413658 BCL9O00512 1426 aa13.67□□□□□ -0.22
ZNF3-205ENST00000413658 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
ZNF3-205ENST00000413658 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
ZNF3-205ENST00000413658 MTHFSDQ2M296 383 aaKnown RBP13.67□□□□□ -0.22
ZNF3-205ENST00000413658 AMOTQ4VCS5 1084 aa13.67□□□□□ -0.22
ZNF3-205ENST00000413658 PLEKHO1Q53GL0 409 aaPredicted RBP13.67□□□□□ -0.22
ZNF3-205ENST00000413658 SPG7Q9UQ90 795 aa13.67□□□□□ -0.22
ZNF3-205ENST00000413658 DOT1LQ8TEK3 1739 aa13.67□□□□□ -0.22
ZNF3-205ENST00000413658 PDE3BQ13370 1112 aa13.66□□□□□ -0.22
ZNF3-205ENST00000413658 FAM182BQ5T319 152 aa13.66□□□□□ -0.22
ZNF3-205ENST00000413658 PHKG2P15735 406 aa13.65□□□□□ -0.22
ZNF3-205ENST00000413658 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
ZNF3-205ENST00000413658 DDX54Q8TDD1 881 aaKnown RBP13.65□□□□□ -0.22
ZNF3-205ENST00000413658 NHSQ6T4R5 1651 aa13.65□□□□□ -0.22
ZNF3-205ENST00000413658 ZNF530Q6P9A1 599 aaPredicted RBP13.64□□□□□ -0.23
ZNF3-205ENST00000413658 CCDC146Q8IYE0 955 aa13.64□□□□□ -0.23
ZNF3-205ENST00000413658 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
ZNF3-205ENST00000413658 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
ZNF3-205ENST00000413658 RUNDC1Q96C34 613 aa13.64□□□□□ -0.23
ZNF3-205ENST00000413658 PNNQ9H307 717 aaKnown RBP13.64□□□□□ -0.23
ZNF3-205ENST00000413658 KDM6AO15550 1401 aaPredicted RBP13.63□□□□□ -0.23
ZNF3-205ENST00000413658 SIPA1L3O60292 1781 aaPredicted RBP13.63□□□□□ -0.23
ZNF3-205ENST00000413658 DAXXQ9UER7 740 aaPredicted RBP13.63□□□□□ -0.23
ZNF3-205ENST00000413658 AKAP4Q5JQC9 854 aa13.62□□□□□ -0.23
ZNF3-205ENST00000413658 FAM9BQ8IZU0 186 aa13.62□□□□□ -0.23
ZNF3-205ENST00000413658 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
ZNF3-205ENST00000413658 MAP3K5Q99683 1374 aa13.61□□□□□ -0.23
ZNF3-205ENST00000413658 BTAF1O14981 1849 aa13.61□□□□□ -0.23
ZNF3-205ENST00000413658 NFE2L2Q16236 605 aa13.61□□□□□ -0.23
ZNF3-205ENST00000413658 FAM196AQ6ZSG2 479 aa13.61□□□□□ -0.23
ZNF3-205ENST00000413658 MRC1P22897 1456 aa13.6□□□□□ -0.23
ZNF3-205ENST00000413658 TMPOP42166 694 aaKnown RBP13.6□□□□□ -0.23
ZNF3-205ENST00000413658 C1orf141Q5JVX7 400 aa13.6□□□□□ -0.23
ZNF3-205ENST00000413658 MAPK8IP3Q9UPT6 1336 aa13.59□□□□□ -0.23
ZNF3-205ENST00000413658 GNAT3A8MTJ3 354 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms