RNA–Protein interactions for RNA: ENST00000408909.6

TRPM3-215, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRPM3, Length 4,701 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-215ENST00000408909 WASF1Q92558 559 aa11.1□□□□□ -0.63
TRPM3-215ENST00000408909 UTP14CQ5TAP6 766 aaKnown RBP11.1□□□□□ -0.63
TRPM3-215ENST00000408909 DAAM2Q86T65 1068 aa11.1□□□□□ -0.63
TRPM3-215ENST00000408909 KIF18AQ8NI77 898 aa11.1□□□□□ -0.63
TRPM3-215ENST00000408909 UPF3BQ9BZI7 483 aaKnown RBP11.1□□□□□ -0.63
TRPM3-215ENST00000408909 FOSBP53539 338 aa11.1□□□□□ -0.63
TRPM3-215ENST00000408909 FERP16591 822 aa11.1□□□□□ -0.63
TRPM3-215ENST00000408909 FAM193AP78312 1265 aa11.1□□□□□ -0.63
TRPM3-215ENST00000408909 IFFO1Q0D2I5 559 aa11.1□□□□□ -0.63
TRPM3-215ENST00000408909 ZSCAN25Q6NSZ9 544 aa11.1□□□□□ -0.63
TRPM3-215ENST00000408909 GCC1Q96CN9 775 aa11.1□□□□□ -0.63
TRPM3-215ENST00000408909 BMS1Q14692 1282 aaKnown RBP11.09□□□□□ -0.63
TRPM3-215ENST00000408909 FGFR1OPO95684 399 aaKnown RBP11.09□□□□□ -0.63
TRPM3-215ENST00000408909 TSPYL4Q9UJ04 414 aa11.09□□□□□ -0.63
TRPM3-215ENST00000408909 PPP6R1Q9UPN7 881 aa11.09□□□□□ -0.63
TRPM3-215ENST00000408909 PLEKHH2Q8IVE3 1493 aa11.09□□□□□ -0.63
TRPM3-215ENST00000408909 SFPQP23246 707 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRPM3-215ENST00000408909 SPECC1Q5M775 1068 aa11.09□□□□□ -0.63
TRPM3-215ENST00000408909 SPC24Q8NBT2 197 aa11.09□□□□□ -0.63
TRPM3-215ENST00000408909 FGD5Q6ZNL6 1462 aa11.09□□□□□ -0.63
TRPM3-215ENST00000408909 NEMFO60524 1076 aa11.09□□□□□ -0.63
TRPM3-215ENST00000408909 KRT32Q14532 448 aa11.09□□□□□ -0.63
TRPM3-215ENST00000408909 DNAJC2Q99543 621 aaKnown RBP11.09□□□□□ -0.63
TRPM3-215ENST00000408909 CTNNA3Q9UI47 895 aa11.09□□□□□ -0.63
TRPM3-215ENST00000408909 KIF5CO60282 957 aa11.08□□□□□ -0.64
TRPM3-215ENST00000408909 ZHX3Q9H4I2 956 aa11.08□□□□□ -0.64
TRPM3-215ENST00000408909 CEP131Q9UPN4 1083 aa11.08□□□□□ -0.64
TRPM3-215ENST00000408909 PDE3AQ14432 1141 aa11.08□□□□□ -0.64
TRPM3-215ENST00000408909 RNF123Q5XPI4 1314 aa11.08□□□□□ -0.64
TRPM3-215ENST00000408909 VGLL3A8MV65 326 aa11.08□□□□□ -0.64
TRPM3-215ENST00000408909 USO1O60763 962 aaKnown RBP11.08□□□□□ -0.64
TRPM3-215ENST00000408909 FERMT1Q9BQL6 677 aa11.08□□□□□ -0.64
TRPM3-215ENST00000408909 TRAK1Q9UPV9 953 aa11.08□□□□□ -0.64
TRPM3-215ENST00000408909 FSD2A1L4K1 749 aa11.07□□□□□ -0.64
TRPM3-215ENST00000408909 SEPT6Q14141 434 aa11.07□□□□□ -0.64
TRPM3-215ENST00000408909 PTPN14Q15678 1187 aa11.07□□□□□ -0.64
TRPM3-215ENST00000408909 CCDC158Q5M9N0 1113 aa11.07□□□□□ -0.64
TRPM3-215ENST00000408909 FBF1Q8TES7 1133 aa11.07□□□□□ -0.64
TRPM3-215ENST00000408909 NUP62CLQ9H1M0 184 aa11.07□□□□□ -0.64
TRPM3-215ENST00000408909 DMTNQ08495 405 aa11.07□□□□□ -0.64
TRPM3-215ENST00000408909 SURF6O75683 361 aaKnown RBP11.07□□□□□ -0.64
TRPM3-215ENST00000408909 SMARCC1Q92922 1105 aaPredicted RBP11.07□□□□□ -0.64
TRPM3-215ENST00000408909 XPCQ01831 940 aaPredicted RBP11.07□□□□□ -0.64
TRPM3-215ENST00000408909 DDX46Q7L014 1031 aaKnown RBP11.07□□□□□ -0.64
TRPM3-215ENST00000408909 EHBP1L1Q8N3D4 1523 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 GOLGA6L9A6NEM1 432 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 FKBP15Q5T1M5 1219 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 SREK1Q8WXA9 508 aaKnown RBP11.06□□□□□ -0.64
TRPM3-215ENST00000408909 BCCIPQ9P287 314 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRPM3-215ENST00000408909 HMGB1P09429 215 aaKnown RBP11.06□□□□□ -0.64
TRPM3-215ENST00000408909 SKAP1Q86WV1 359 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 TICAM2Q86XR7 235 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 FAM114A1Q8IWE2 563 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 SRCIN1Q9C0H9 1055 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 FYB1O15117 783 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
TRPM3-215ENST00000408909 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRPM3-215ENST00000408909 CCDC30Q5VVM6 783 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 CCDC113Q9H0I3 377 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 HOMER2Q9NSB8 354 aa11.06□□□□□ -0.64
TRPM3-215ENST00000408909 PABPN1LA6NDY0 278 aaKnown RBP11.05□□□□□ -0.64
TRPM3-215ENST00000408909 SSR1P43307 286 aaKnown RBP11.05□□□□□ -0.64
TRPM3-215ENST00000408909 FAM177A1Q8N128 213 aaPredicted RBP11.05□□□□□ -0.64
TRPM3-215ENST00000408909 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
TRPM3-215ENST00000408909 MCM5P33992 734 aa11.05□□□□□ -0.64
TRPM3-215ENST00000408909 KIF4BQ2VIQ3 1234 aa11.05□□□□□ -0.64
TRPM3-215ENST00000408909 CCDC69A6NI79 296 aa11.04□□□□□ -0.64
TRPM3-215ENST00000408909 CFAP100Q494V2 611 aa11.04□□□□□ -0.64
TRPM3-215ENST00000408909 SPATA32Q96LK8 384 aa11.04□□□□□ -0.64
TRPM3-215ENST00000408909 TSNARE1Q96NA8 513 aa11.04□□□□□ -0.64
TRPM3-215ENST00000408909 PTPN23Q9H3S7 1636 aa11.04□□□□□ -0.64
TRPM3-215ENST00000408909 ERICH4A6NGS2 130 aa11.04□□□□□ -0.64
TRPM3-215ENST00000408909 RNF187Q5TA31 235 aaPredicted RBP11.04□□□□□ -0.64
TRPM3-215ENST00000408909 CCDC144AA2RUR9 1427 aa11.04□□□□□ -0.64
TRPM3-215ENST00000408909 KIF4AO95239 1232 aa11.04□□□□□ -0.64
TRPM3-215ENST00000408909 CETN1Q12798 172 aa11.04□□□□□ -0.64
TRPM3-215ENST00000408909 TNIP1Q15025 636 aa11.04□□□□□ -0.64
TRPM3-215ENST00000408909 PHAXQ9H814 394 aaKnown RBP11.04□□□□□ -0.64
TRPM3-215ENST00000408909 MAP3K11Q16584 847 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 BLOC1S2Q6QNY1 142 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 MPHOSPH10O00566 681 aaKnown RBP11.03□□□□□ -0.64
TRPM3-215ENST00000408909 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
TRPM3-215ENST00000408909 RAB34Q9BZG1 259 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 ADAMTS8Q9UP79 889 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 NBPF1Q3BBV0 1214 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 TSG101Q99816 390 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 PLVAPQ9BX97 442 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 ANO10Q9NW15 660 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 SSBP05455 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRPM3-215ENST00000408909 HSPA4P34932 840 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 ZNF287Q9HBT7 754 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 MTMR7Q9Y216 660 aa11.03□□□□□ -0.64
TRPM3-215ENST00000408909 K7ELQ4 463 aaPredicted RBP11.02□□□□□ -0.64
TRPM3-215ENST00000408909 PPP4R3AQ6IN85 833 aa11.02□□□□□ -0.64
TRPM3-215ENST00000408909 GAS2L2Q8NHY3 880 aa11.02□□□□□ -0.64
TRPM3-215ENST00000408909 ACTN2P35609 894 aa11.02□□□□□ -0.65
TRPM3-215ENST00000408909 DNAAF4Q8WXU2 420 aa11.02□□□□□ -0.65
TRPM3-215ENST00000408909 LRRC45Q96CN5 670 aa11.02□□□□□ -0.65
TRPM3-215ENST00000408909 PRDM4Q9UKN5 801 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms