RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 AKAP2Q9Y2D5 859 aa5.27□□□□□ -1.57
HERC4-204ENST00000395198 IFT88Q13099 833 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 HSCBQ8IWL3 235 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 MPHOSPH6Q99547 160 aaKnown RBP5.26□□□□□ -1.57
HERC4-204ENST00000395198 S100BP04271 92 aaPredicted RBP5.26□□□□□ -1.57
HERC4-204ENST00000395198 U2AF1L5P0DN76 240 aaPredicted RBP5.26□□□□□ -1.57
HERC4-204ENST00000395198 CD151P48509 253 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 U2AF1Q01081 240 aaKnown RBP eCLIP5.26□□□□□ -1.575e-7■■■■□ 20.1
HERC4-204ENST00000395198 DRC7Q8IY82 874 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 ZSWIM4Q9H7M6 989 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 GTF2F1P35269 517 aaKnown RBP eCLIP5.26□□□□□ -1.573e-9■□□□□ 10.1
HERC4-204ENST00000395198 PMFBP1Q8TBY8 1022 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 ZNF219Q9P2Y4 722 aaPredicted RBP5.26□□□□□ -1.57
HERC4-204ENST00000395198 ABCF2Q9UG63 623 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 GNALP38405 381 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 EIF5P55010 431 aaKnown RBP5.26□□□□□ -1.57
HERC4-204ENST00000395198 ZBED6P86452 979 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 PSMD2Q13200 908 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 TBC1D10BQ4KMP7 808 aaPredicted RBP5.26□□□□□ -1.57
HERC4-204ENST00000395198 TCEAL9Q9UHQ7 104 aa5.26□□□□□ -1.57
HERC4-204ENST00000395198 SKILP12757 684 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 MTA2O94776 668 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 CLK1P49759 484 aaKnown RBP5.25□□□□□ -1.57
HERC4-204ENST00000395198 SLC20A2Q08357 652 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 PPP4R3BQ5MIZ7 849 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 MFSD4BQ5TF39 518 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 PDXDC1Q6P996 788 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 ANKRD13DQ6ZTN6 518 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 KRT77Q7Z794 578 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 KIAA1958Q8N8K9 716 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 C22orf23Q9BZE7 217 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 PDGFRBP09619 1106 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 SUGP1Q8IWZ8 645 aaKnown RBP5.25□□□□□ -1.57
HERC4-204ENST00000395198 NELL1Q92832 810 aa5.25□□□□□ -1.57
HERC4-204ENST00000395198 IFRD1O00458 451 aaPredicted RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 ENOX2Q16206 610 aaKnown RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 USP48Q86UV5 1035 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 METTL16Q86W50 562 aaKnown RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 CD248Q9HCU0 757 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 SLAIN2Q9P270 581 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 SPDYE2BA6NHP3 402 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 SPDYE5A6NIY4 337 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 SPDYE6P0CI01 402 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 PAX7P23759 505 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 SCNN1AP37088 669 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 MAPRE1Q15691 268 aaKnown RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 SPDYE2Q495Y8 402 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 DUSP9Q99956 384 aaKnown RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 TRIM34Q9BYJ4 488 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 COL6A1P12109 1028 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 IBSPP21815 317 aaPredicted RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 C10orf62Q5T681 223 aaPredicted RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 OGFOD1Q8N543 542 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 AS3MTQ9HBK9 375 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 RNASEH2AO75792 299 aaKnown RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 MARSP56192 900 aaKnown RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 GPSM2P81274 684 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 LSM14AQ8ND56 463 aaKnown RBP5.24□□□□□ -1.57
HERC4-204ENST00000395198 ENAMQ9NRM1 1142 aa5.24□□□□□ -1.57
HERC4-204ENST00000395198 HMGXB3Q12766 1538 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 TMEM238LA0A1B0GVL6 79 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 RBP3P10745 1247 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 MAN1A1P33908 653 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 TNNI2P48788 182 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 SMYD5Q6GMV2 418 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 CENPOQ9BU64 300 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 TMEM63CQ9P1W3 806 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 RAPGEF3O95398 923 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 CDC37Q16543 378 aaPredicted RBP5.23□□□□□ -1.57
HERC4-204ENST00000395198 CCDC174Q6PII3 467 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 PLPP6Q8IY26 295 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 CLASRPQ8N2M8 674 aaKnown RBP5.23□□□□□ -1.57
HERC4-204ENST00000395198 FARP1Q9Y4F1 1045 aaPredicted RBP5.23□□□□□ -1.57
HERC4-204ENST00000395198 POU5F1BQ06416 359 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 ODR4Q5SWX8 454 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 MTMR14Q8NCE2 650 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 TAF4BQ92750 862 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 C8orf48Q96LL4 319 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 ANAPC4Q9UJX5 808 aa5.23□□□□□ -1.57
HERC4-204ENST00000395198 TRIM64CA6NLI5 447 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 PSMC1P62191 440 aaKnown RBP5.22□□□□□ -1.57
HERC4-204ENST00000395198 PTK7Q13308 1070 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 IP6K2Q9UHH9 426 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 LZTS1Q9Y250 596 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 PEX19P40855 299 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 ABL2P42684 1182 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 VPS37AQ8NEZ2 397 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 ERP27Q96DN0 273 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 NELL2Q99435 816 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 IPO5O00410 1097 aaKnown RBP5.22□□□□□ -1.57
HERC4-204ENST00000395198 CCDC92Q53HC0 331 aaPredicted RBP5.22□□□□□ -1.57
HERC4-204ENST00000395198 SH3D19Q5HYK7 790 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 RELL1Q8IUW5 271 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 TSC1Q92574 1164 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 CCDC47Q96A33 483 aaKnown RBP5.22□□□□□ -1.57
HERC4-204ENST00000395198 CCDC94Q9BW85 323 aaPredicted RBP5.22□□□□□ -1.57
HERC4-204ENST00000395198 CLIC5Q9NZA1 410 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 ERICH4A6NGS2 130 aa5.22□□□□□ -1.57
HERC4-204ENST00000395198 KCNA2P16389 499 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms