RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 SMC1AQ14683 1233 aaKnown RBP8.7□□□□□ -1.02
SYNE2-205ENST00000394768 ZNF428Q96B54 188 aa8.7□□□□□ -1.02
SYNE2-205ENST00000394768 SURF6O75683 361 aaKnown RBP8.69□□□□□ -1.02
SYNE2-205ENST00000394768 POLR3GO15318 223 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-205ENST00000394768 FAM107BQ9H098 131 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 MAP2K1Q02750 393 aaPredicted RBP8.69□□□□□ -1.02
SYNE2-205ENST00000394768 FAM69CQ0P6D2 419 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 PLCD4Q9BRC7 762 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 PLVAPQ9BX97 442 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 SYNJ2O15056 1496 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 SPA17Q15506 151 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 KIAA1328Q86T90 577 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 CAVIN4Q5BKX8 364 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 ZPR1O75312 459 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 CCDC172P0C7W6 258 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 HSP90AB3PQ58FF7 597 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 ESCO1Q5FWF5 840 aa8.69□□□□□ -1.02
SYNE2-205ENST00000394768 SSR1P43307 286 aaKnown RBP8.69□□□□□ -1.02
SYNE2-205ENST00000394768 TOM1L2Q6ZVM7 507 aa8.68□□□□□ -1.02
SYNE2-205ENST00000394768 CENPHQ9H3R5 247 aa8.68□□□□□ -1.02
SYNE2-205ENST00000394768 EIF5P55010 431 aaKnown RBP8.68□□□□□ -1.02
SYNE2-205ENST00000394768 BBXQ8WY36 941 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-205ENST00000394768 ZSCAN31Q96LW9 406 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-205ENST00000394768 FOSBP53539 338 aa8.68□□□□□ -1.02
SYNE2-205ENST00000394768 TNMDQ9H2S6 317 aa8.68□□□□□ -1.02
SYNE2-205ENST00000394768 LRSAM1Q6UWE0 723 aa8.68□□□□□ -1.02
SYNE2-205ENST00000394768 B4DLN1 442 aa8.68□□□□□ -1.02
SYNE2-205ENST00000394768 MRPL12P52815 198 aaKnown RBP8.68□□□□□ -1.02
SYNE2-205ENST00000394768 CCDC83Q8IWF9 413 aa8.68□□□□□ -1.02
SYNE2-205ENST00000394768 TTC12Q9H892 705 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-205ENST00000394768 CYB5RLQ6IPT4 315 aa8.68□□□□□ -1.02
SYNE2-205ENST00000394768 PROSER2Q86WR7 435 aaPredicted RBP8.68□□□□□ -1.02
SYNE2-205ENST00000394768 ARHGAP29Q52LW3 1261 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 CRACR2BQ8N4Y2 399 aaPredicted RBP8.67□□□□□ -1.02
SYNE2-205ENST00000394768 ACTN2P35609 894 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 CRACR2AQ9BSW2 395 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 CTNNA2P26232 953 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 C6orf163Q5TEZ5 329 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 NAA15Q9BXJ9 866 aaKnown RBP8.67□□□□□ -1.02
SYNE2-205ENST00000394768 LRRC27Q9C0I9 530 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 LRRFIP2Q9Y608 721 aaKnown RBP8.67□□□□□ -1.02
SYNE2-205ENST00000394768 U3KPZ7 1027 aaPredicted RBP8.67□□□□□ -1.02
SYNE2-205ENST00000394768 SUPT6HQ7KZ85 1726 aaKnown RBP8.67□□□□□ -1.02
SYNE2-205ENST00000394768 PDCL2Q8N4E4 241 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 LRP2BPQ9P2M1 347 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 PPP6R1Q9UPN7 881 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 GSTTP1A0A1W2PQM5 241 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 SHTN1A0MZ66 631 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 MICALCLQ6ZW33 695 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 AIDAQ96BJ3 306 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 FANCD2Q9BXW9 1451 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 ZSCAN12O43309 604 aa8.67□□□□□ -1.02
SYNE2-205ENST00000394768 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.67□□□□□ -1.02
SYNE2-205ENST00000394768 SMARCA4P51532 1647 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 SKIDA1Q1XH10 827 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 CCDC82Q8N4S0 544 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 STRN4Q9NRL3 753 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 BRD4O60885 1362 aaPredicted RBP8.66□□□□□ -1.02
SYNE2-205ENST00000394768 GAPVD1Q14C86 1478 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 ATP2B1P20020 1258 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 PLEKHH1Q9ULM0 1364 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 MYO1BO43795 1136 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 DDX11Q96FC9 970 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 RNF41Q9H4P4 317 aaPredicted RBP8.66□□□□□ -1.02
SYNE2-205ENST00000394768 POLA1P09884 1462 aaPredicted RBP8.66□□□□□ -1.02
SYNE2-205ENST00000394768 APAF1O14727 1248 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 HDGFL1Q5TGJ6 251 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 SSBP05455 408 aaKnown RBP eCLIP8.66□□□□□ -1.02
SYNE2-205ENST00000394768 ZWINTO95229 277 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 MRPS9P82933 396 aaKnown RBP8.66□□□□□ -1.02
SYNE2-205ENST00000394768 AMPD3Q01432 767 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 RAB3IL1Q8TBN0 382 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 CRBNQ96SW2 442 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 CEP126Q9P2H0 1117 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 BAG4O95429 457 aaKnown RBP8.66□□□□□ -1.02
SYNE2-205ENST00000394768 LARP1Q6PKG0 1096 aaKnown RBP8.66□□□□□ -1.02
SYNE2-205ENST00000394768 NUP133Q8WUM0 1156 aa8.66□□□□□ -1.02
SYNE2-205ENST00000394768 HECW1Q76N89 1606 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 CCDC14Q49A88 953 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 FMNL2Q96PY5 1086 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 LRPPRCP42704 1394 aaKnown RBP8.65□□□□□ -1.02
SYNE2-205ENST00000394768 A0A087WZG4 1122 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 MYO15BQ96JP2 1530 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 MTHFSP49914 203 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 TTLL12Q14166 644 aaPredicted RBP8.65□□□□□ -1.02
SYNE2-205ENST00000394768 IKBKGQ9Y6K9 419 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 HFM1A2PYH4 1435 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 UTP14AQ9BVJ6 771 aaKnown RBP8.65□□□□□ -1.02
SYNE2-205ENST00000394768 KCNH5Q8NCM2 988 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 ANKRD30BQ9BXX2 1392 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 WIZO95785 1651 aa8.65□□□□□ -1.02
SYNE2-205ENST00000394768 NOP2P46087 812 aaKnown RBP8.65□□□□□ -1.03
SYNE2-205ENST00000394768 IFI16Q16666 785 aaKnown RBP8.65□□□□□ -1.03
SYNE2-205ENST00000394768 LNPKQ9C0E8 428 aa8.65□□□□□ -1.03
SYNE2-205ENST00000394768 USO1O60763 962 aaKnown RBP8.65□□□□□ -1.03
SYNE2-205ENST00000394768 ALS2CR12Q96Q35 445 aa8.65□□□□□ -1.03
SYNE2-205ENST00000394768 FSD2A1L4K1 749 aa8.64□□□□□ -1.03
SYNE2-205ENST00000394768 NEK4P51957 841 aa8.64□□□□□ -1.03
SYNE2-205ENST00000394768 APBB1IPQ7Z5R6 666 aaPredicted RBP8.64□□□□□ -1.03
SYNE2-205ENST00000394768 FAM114A1Q8IWE2 563 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms