RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TRMT1Q9NXH9 659 aaKnown RBP14.96□□□□□ -0.01
SLC28A1-203ENST00000394573 CLASP1Q7Z460 1538 aa14.96□□□□□ -0.01
SLC28A1-203ENST00000394573 ST18O60284 1047 aa14.96□□□□□ -0.02
SLC28A1-203ENST00000394573 TMF1P82094 1093 aa14.96□□□□□ -0.02
SLC28A1-203ENST00000394573 CCDC183Q5T5S1 534 aa14.96□□□□□ -0.02
SLC28A1-203ENST00000394573 TMEM57Q8N5G2 664 aa14.96□□□□□ -0.02
SLC28A1-203ENST00000394573 SGSM3Q96HU1 749 aa14.96□□□□□ -0.02
SLC28A1-203ENST00000394573 TSR2Q969E8 191 aaKnown RBP14.95□□□□□ -0.02
SLC28A1-203ENST00000394573 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
SLC28A1-203ENST00000394573 CDC45O75419 566 aa14.95□□□□□ -0.02
SLC28A1-203ENST00000394573 TTLL5Q6EMB2 1281 aa14.95□□□□□ -0.02
SLC28A1-203ENST00000394573 LRRIQ1Q96JM4 1722 aa14.95□□□□□ -0.02
SLC28A1-203ENST00000394573 SEC31AO94979 1220 aaKnown RBP14.94□□□□□ -0.02
SLC28A1-203ENST00000394573 LMAN1P49257 510 aa14.94□□□□□ -0.02
SLC28A1-203ENST00000394573 MAGI2Q86UL8 1455 aa14.94□□□□□ -0.02
SLC28A1-203ENST00000394573 COL17A1Q9UMD9 1497 aaPredicted RBP14.94□□□□□ -0.02
SLC28A1-203ENST00000394573 C14orf37Q86TY3 774 aa14.94□□□□□ -0.02
SLC28A1-203ENST00000394573 BRD1O95696 1058 aa14.93□□□□□ -0.02
SLC28A1-203ENST00000394573 TPM3P06753 285 aa14.93□□□□□ -0.02
SLC28A1-203ENST00000394573 SEMA3FQ13275 785 aa14.93□□□□□ -0.02
SLC28A1-203ENST00000394573 DTNBO60941 627 aa14.93□□□□□ -0.02
SLC28A1-203ENST00000394573 ZSCAN25Q6NSZ9 544 aa14.93□□□□□ -0.02
SLC28A1-203ENST00000394573 FOXR1Q6PIV2 292 aa14.93□□□□□ -0.02
SLC28A1-203ENST00000394573 CCDC34Q96HJ3 373 aa14.93□□□□□ -0.02
SLC28A1-203ENST00000394573 DDX19BQ9UMR2 479 aa14.93□□□□□ -0.02
SLC28A1-203ENST00000394573 CNPY2Q9Y2B0 182 aa14.93□□□□□ -0.02
SLC28A1-203ENST00000394573 ARID5BQ14865 1188 aa14.92□□□□□ -0.02
SLC28A1-203ENST00000394573 PPP2R5AQ15172 486 aa14.92□□□□□ -0.02
SLC28A1-203ENST00000394573 LUZP1Q86V48 1076 aa14.92□□□□□ -0.02
SLC28A1-203ENST00000394573 ERO1AQ96HE7 468 aa14.92□□□□□ -0.02
SLC28A1-203ENST00000394573 CWC15Q9P013 229 aaKnown RBP14.92□□□□□ -0.02
SLC28A1-203ENST00000394573 DAPK1P53355 1430 aa14.92□□□□□ -0.02
SLC28A1-203ENST00000394573 CHMP3Q9Y3E7 222 aa14.92□□□□□ -0.02
SLC28A1-203ENST00000394573 LAMC3Q9Y6N6 1575 aa14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 ERBINQ96RT1 1412 aa14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 GSPT1P15170 499 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 MX1P20591 662 aa14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 OAS2P29728 719 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 CACTINQ8WUQ7 758 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 TMX3Q96JJ7 454 aa14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 EHBP1L1Q8N3D4 1523 aa14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 TPM4P67936 248 aa14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 GORABQ5T7V8 394 aa14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 CCDC91Q7Z6B0 441 aa14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 TCP11L2Q8N4U5 519 aa14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 GAPVD1Q14C86 1478 aa14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 SPAG9O60271 1321 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-203ENST00000394573 HTATSF1O43719 755 aaKnown RBP14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 SLU7O95391 586 aaKnown RBP14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 HSP90AB3PQ58FF7 597 aa14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 HOMEZQ8IX15 550 aa14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 NOB1Q9ULX3 412 aaKnown RBP14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 NEK4P51957 841 aa14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 PTPN14Q15678 1187 aa14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 FBXO18Q8NFZ0 1043 aa14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 FIBPO43427 364 aa14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 H2AFXP16104 143 aaPredicted RBP14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 GPS2Q13227 327 aa14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 ARHGAP29Q52LW3 1261 aa14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 ZBTB40Q9NUA8 1239 aa14.9□□□□□ -0.02
SLC28A1-203ENST00000394573 PLEKHG2Q9H7P9 1386 aa14.89□□□□□ -0.03
SLC28A1-203ENST00000394573 ABCC5O15440 1437 aa14.89□□□□□ -0.03
SLC28A1-203ENST00000394573 SHROOM2Q13796 1616 aa14.89□□□□□ -0.03
SLC28A1-203ENST00000394573 CCDC189A1A4V9 331 aa14.89□□□□□ -0.03
SLC28A1-203ENST00000394573 MAP2K2P36507 400 aa14.89□□□□□ -0.03
SLC28A1-203ENST00000394573 CCDC27Q2M243 656 aa14.89□□□□□ -0.03
SLC28A1-203ENST00000394573 TRIM5Q9C035 493 aa14.89□□□□□ -0.03
SLC28A1-203ENST00000394573 CCDC144BQ3MJ40 725 aa14.88□□□□□ -0.03
SLC28A1-203ENST00000394573 NOM1Q5C9Z4 860 aaKnown RBP14.88□□□□□ -0.03
SLC28A1-203ENST00000394573 CCDC144CPQ8IYA2 1237 aa14.88□□□□□ -0.03
SLC28A1-203ENST00000394573 SSH1Q8WYL5 1049 aa14.88□□□□□ -0.03
SLC28A1-203ENST00000394573 SKIDA1Q1XH10 827 aa14.88□□□□□ -0.03
SLC28A1-203ENST00000394573 SLFNL1Q499Z3 407 aa14.88□□□□□ -0.03
SLC28A1-203ENST00000394573 EPC1Q9H2F5 836 aa14.88□□□□□ -0.03
SLC28A1-203ENST00000394573 PLXNC1O60486 1568 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 EIF3CLB5ME19 914 aaKnown RBP14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 BIRC2Q13490 618 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 CWC27Q6UX04 472 aaKnown RBP14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 REXO1L1PQ8IX06 675 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 ANKRD20A12PQ8NF67 263 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 EIF3CQ99613 913 aaKnown RBP14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 PDRG1Q9NUG6 133 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 SH3BP1Q9Y3L3 701 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 MAGEA9P43362 315 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 MAP2K1Q02750 393 aaPredicted RBP14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 ATF7IPQ6VMQ6 1270 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 GOLGA5Q8TBA6 731 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 CALR3Q96L12 384 aaKnown RBP14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 PLEKHA4Q9H4M7 779 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
SLC28A1-203ENST00000394573 CAMK4Q16566 473 aa14.86□□□□□ -0.03
SLC28A1-203ENST00000394573 LRCH2Q5VUJ6 765 aa14.86□□□□□ -0.03
SLC28A1-203ENST00000394573 TMCO3Q6UWJ1 677 aa14.86□□□□□ -0.03
SLC28A1-203ENST00000394573 FUCA2Q9BTY2 467 aa14.86□□□□□ -0.03
SLC28A1-203ENST00000394573 ZNF853P0CG23 659 aa14.86□□□□□ -0.03
SLC28A1-203ENST00000394573 EXOSC9Q06265 439 aaKnown RBP14.86□□□□□ -0.03
SLC28A1-203ENST00000394573 TCHHQ07283 1943 aa14.86□□□□□ -0.03
SLC28A1-203ENST00000394573 ABCC2Q92887 1545 aa14.85□□□□□ -0.03
SLC28A1-203ENST00000394573 ATP6V1AP38606 617 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms