RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 ZNF853P0CG23 659 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 IQCEQ6IPM2 695 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 LUZP1Q86V48 1076 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 ERC1Q8IUD2 1116 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 WDR63Q8IWG1 891 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 LTV1Q96GA3 475 aaPredicted RBP3.83□□□□□ -1.8
PHF3-202ENST00000393387 CDK5RAP3Q96JB5 506 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 CCDC114Q96M63 670 aa3.83□□□□□ -1.8
PHF3-202ENST00000393387 MACROD2A1Z1Q3 448 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 TSPY2A6NKD2 308 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 TSPY3P0CV98 308 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 TSPY8P0CW00 308 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 TSPY1Q01534 308 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 TMED1Q13445 227 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 HLTFQ14527 1009 aaKnown RBP eCLIP3.82□□□□□ -1.81e-7■■□□□ 11.8
PHF3-202ENST00000393387 KIF4BQ2VIQ3 1234 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 GRIPAP1Q4V328 841 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 ARHGAP29Q52LW3 1261 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 SPECC1LQ69YQ0 1117 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 NAA16Q6N069 864 aaPredicted RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 ARMCX6Q7L4S7 300 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 KRT222Q8N1A0 295 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 SEPT10Q9P0V9 454 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 KTN1Q86UP2 1357 aaKnown RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 EPB41L2O43491 1005 aaKnown RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 KRT18P05783 430 aaKnown RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 PRR16Q569H4 304 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 MYCBPQ99417 103 aaPredicted RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 LNPKQ9C0E8 428 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 GCOM1H8Y6P7 765 aaPredicted RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 MAP4K4O95819 1239 aaPredicted RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 MYZAPP0CAP1 466 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 CCDC192P0DO97 292 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 SPECC1Q5M775 1068 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 GSDMBQ8TAX9 411 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 CCDC94Q9BW85 323 aaPredicted RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 SLC24A3Q9HC58 644 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 ATG3Q9NT62 314 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 ZEB2O60315 1214 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 SH3BGRP55822 239 aaPredicted RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 MCM6Q14566 821 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 LRRC23Q53EV4 343 aaPredicted RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 DDX46Q7L014 1031 aaKnown RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 GTPBP4Q9BZE4 634 aaKnown RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 TXLNAP40222 546 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 GJC2Q5T442 439 aaPredicted RBP3.82□□□□□ -1.8
PHF3-202ENST00000393387 RINLQ6ZS11 566 aa3.82□□□□□ -1.8
PHF3-202ENST00000393387 PPP1R12AO14974 1030 aaPredicted RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 STK10O94804 968 aaKnown RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 ZKSCAN1P17029 563 aaPredicted RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 TRIM35Q9UPQ4 493 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 TXNDC9O14530 226 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 EIF5P55010 431 aaKnown RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 OTUD6BQ8N6M0 293 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 ANKRD18BA2A2Z9 1011 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 HMGB1P1B2RPK0 211 aaPredicted RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 SLC4A1P02730 911 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 RANBP1P43487 201 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 PIAS4Q8N2W9 510 aaPredicted RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 CLIP2Q9UDT6 1046 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 USP25Q9UHP3 1055 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 A0A1B0GUA9 196 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 ERC2O15083 957 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 HSF2BPO75031 334 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 ANAPC15P60006 121 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 BIRC2Q13490 618 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 CCDC158Q5M9N0 1113 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 CEP135Q66GS9 1140 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 PPFIBP2Q8ND30 876 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 IRAK4Q9NWZ3 460 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 BIN2Q9UBW5 565 aaPredicted RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 hCG_2014768A0A024R1R8 64 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 SKOR1P84550 965 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 PSMD6Q15008 389 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 STK38Q15208 465 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 MAP9Q49MG5 647 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 CDCA8Q53HL2 280 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 CEP85LQ5SZL2 805 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 RALYLQ86SE5 291 aaKnown RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 CEP112Q8N8E3 955 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 GBP3Q9H0R5 595 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 COMMD10Q9Y6G5 202 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 A0A1W2PRG0 241 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 MAFGO15525 162 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 SMIM24O75264 130 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 IVLP07476 585 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 COG7P83436 770 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 IMMTQ16891 758 aaKnown RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 CFAP100Q494V2 611 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 BAG1Q99933 345 aaPredicted RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 HOMER2Q9NSB8 354 aa3.81□□□□□ -1.8
PHF3-202ENST00000393387 RBM27Q9P2N5 1060 aaKnown RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 FBXO2Q9UK22 296 aaPredicted RBP3.81□□□□□ -1.8
PHF3-202ENST00000393387 CASQ2O14958 399 aaPredicted RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 U2AF2P26368 475 aaKnown RBP eCLIP3.8□□□□□ -1.81e-6■■□□□ 12.3
PHF3-202ENST00000393387 ERCC5P28715 1186 aaPredicted RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 PRPF4BQ13523 1007 aaKnown RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 SAFBQ15424 915 aaKnown RBP eCLIP3.8□□□□□ -1.84e-8■□□□□ 8.4
PHF3-202ENST00000393387 CTAGE6Q86UF2 777 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms